Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340430
Identifier: 146340430
GI number: 146340430
Start: 3648085
End: 3648570
Strand: Direct
Name: 146340430
Synonym: BRADO3469
Alternate gene names: NA
Gene position: 3648085-3648570 (Clockwise)
Preceding gene: 146340426
Following gene: 146340434
Centisome position: 48.92
GC content: 73.25
Gene sequence:
>486_bases ATGTCCCGCCTGCACTGGATCGACTTGCTGACTGCCGGCCGCCTCGCGATCGCGGCGCGGCCGCGGGCGGAGGACTGGCT GGCGGACGACACCGCGGTGTGGGCGGGCGAGGGCATCGCCATCGTGGTCAGCCTGCTGGAGCCGGCGGAGGTGCATGATC TCGGCCTGCAGCGCGAGGCCGCGCTGTGCGAGAGCCGTGGCATGGCCTTCGTCTCGTTCCCGATCCCCGACCGCGGTCTG CCCGAACGCCGCAGCGCGGCGCTGCAGCTGGCGCAGGACCTCGCCGCGCGGCTGACCGAGGGCGCTGATGTCCTGATCCA TTGCCGCGCAGGCATCGGCCGCTCGGCGGTCATCGCGGCGTGCGTGATGGGCCGGCTCGGTGTCGATGCCGGCGAGGCCC TGAGGCGCATTGCTGCCGCGCGGGGCGTCCGAGTGCCGGACACCGAGGAGCAGCGGAGGTGGGTGATGCAGATGGCGGGA GAGTAG
Upstream 100 bases:
>100_bases GTCTTCATGCGCATCAATTAGCGCAAACCGGCCCGGCTGACATGGCCTCGCAGATGTGGCGGTGGCGCACGGGCTGTGAT CTCTCGACAGGATCTCCCGC
Downstream 100 bases:
>100_bases GGCGCTTCAGACGCCAGCGGTGCAGGCCTTACTCGCTGCGGCCGAACTCGCATCCCGCATGCGCGTATGACGCGCGGCGA ATGCCATACTCGTCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSRLHWIDLLTAGRLAIAARPRAEDWLADDTAVWAGEGIAIVVSLLEPAEVHDLGLQREAALCESRGMAFVSFPIPDRGL PERRSAALQLAQDLAARLTEGADVLIHCRAGIGRSAVIAACVMGRLGVDAGEALRRIAAARGVRVPDTEEQRRWVMQMAG E
Sequences:
>Translated_161_residues MSRLHWIDLLTAGRLAIAARPRAEDWLADDTAVWAGEGIAIVVSLLEPAEVHDLGLQREAALCESRGMAFVSFPIPDRGL PERRSAALQLAQDLAARLTEGADVLIHCRAGIGRSAVIAACVMGRLGVDAGEALRRIAAARGVRVPDTEEQRRWVMQMAG E >Mature_160_residues SRLHWIDLLTAGRLAIAARPRAEDWLADDTAVWAGEGIAIVVSLLEPAEVHDLGLQREAALCESRGMAFVSFPIPDRGLP ERRSAALQLAQDLAARLTEGADVLIHCRAGIGRSAVIAACVMGRLGVDAGEALRRIAAARGVRVPDTEEQRRWVMQMAGE
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17357; Mature: 17226
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLHWIDLLTAGRLAIAARPRAEDWLADDTAVWAGEGIAIVVSLLEPAEVHDLGLQREA CCCCHHHHHHHCCCEEEEECCCCCHHCCCCCEEECCCCHHHHHHHHCCHHHHHHCCHHHH ALCESRGMAFVSFPIPDRGLPERRSAALQLAQDLAARLTEGADVLIHCRAGIGRSAVIAA HHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH CVMGRLGVDAGEALRRIAAARGVRVPDTEEQRRWVMQMAGE HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SRLHWIDLLTAGRLAIAARPRAEDWLADDTAVWAGEGIAIVVSLLEPAEVHDLGLQREA CCCHHHHHHHCCCEEEEECCCCCHHCCCCCEEECCCCHHHHHHHHCCHHHHHHCCHHHH ALCESRGMAFVSFPIPDRGLPERRSAALQLAQDLAARLTEGADVLIHCRAGIGRSAVIAA HHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH CVMGRLGVDAGEALRRIAAARGVRVPDTEEQRRWVMQMAGE HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA