Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340363
Identifier: 146340363
GI number: 146340363
Start: 3584351
End: 3584812
Strand: Reverse
Name: 146340363
Synonym: BRADO3391
Alternate gene names: NA
Gene position: 3584812-3584351 (Counterclockwise)
Preceding gene: 146340366
Following gene: 146340360
Centisome position: 48.08
GC content: 64.94
Gene sequence:
>462_bases TTGCGGGAGCGATGGGCCGCGGGACAACTGACGGCGGACCATGCGCTGGAGCTGATGCGCGAATCCTATCGCAACTACAT TCGTCGGCAGACGCCGCGCTTTCGCGCGCTGTTCGACCATCTGACCGGGGATCACGCGCCGCTGGTGATCCATTGCACGG CCGGCAAGGACCGCACTGGCGTCGCCTGCGCGCTCGTCCTCGTCGCGCTGGATGTGGACGACGACATCATCATGGAAGAC TACCTGCTCACCAACCAATACTTCCGGCGTGACGCAGCCGCACATCCCGAGCTTCCGCGAGACGTGCTCGAGGCGATCGG GACCGTGCAGGCCTCGTTCCTGGCTGCGGCCCTCGACACGATTCGCCAGGATTATGGAGATCTCGAAGCCTATCTGCGCG ACGGTCTCGGTGTCGACGGCGCCGCGCGCGAAGCCCTGAAACAGCGCTATCTCACCGGGTGA
Upstream 100 bases:
>100_bases GTTCGATTTCCGCGAAGATGAGGAACGGACCGCCGGTCTCTGCGCGATTGCCGAGATCAGGGTTCACTCCCTGCCGATCG AACCGAGCGTCGTACCGGCC
Downstream 100 bases:
>100_bases GATGCGTGAGCGTTGCGATCGAGCAACGCACGTCGTACCTCGCGCGATCAGGATGATCGCAACATCTTGGCGATTTCAGA TCAAGCCGCTTCGATGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Tyrosine Phosphatase; Protein-Tyrosine-Phosphatase; Tyrosine Phosphatase; Protein-Tyrosine Phosphatase; Tyrosine-Protein Phosphatase; Tyrosine Protein Phosphatase; Protein-Tyrosine/Serine Phosphatase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRERWAAGQLTADHALELMRESYRNYIRRQTPRFRALFDHLTGDHAPLVIHCTAGKDRTGVACALVLVALDVDDDIIMED YLLTNQYFRRDAAAHPELPRDVLEAIGTVQASFLAAALDTIRQDYGDLEAYLRDGLGVDGAAREALKQRYLTG
Sequences:
>Translated_153_residues MRERWAAGQLTADHALELMRESYRNYIRRQTPRFRALFDHLTGDHAPLVIHCTAGKDRTGVACALVLVALDVDDDIIMED YLLTNQYFRRDAAAHPELPRDVLEAIGTVQASFLAAALDTIRQDYGDLEAYLRDGLGVDGAAREALKQRYLTG >Mature_153_residues MRERWAAGQLTADHALELMRESYRNYIRRQTPRFRALFDHLTGDHAPLVIHCTAGKDRTGVACALVLVALDVDDDIIMED YLLTNQYFRRDAAAHPELPRDVLEAIGTVQASFLAAALDTIRQDYGDLEAYLRDGLGVDGAAREALKQRYLTG
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17190; Mature: 17190
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERWAAGQLTADHALELMRESYRNYIRRQTPRFRALFDHLTGDHAPLVIHCTAGKDRTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHH VACALVLVALDVDDDIIMEDYLLTNQYFRRDAAAHPELPRDVLEAIGTVQASFLAAALDT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRQDYGDLEAYLRDGLGVDGAAREALKQRYLTG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRERWAAGQLTADHALELMRESYRNYIRRQTPRFRALFDHLTGDHAPLVIHCTAGKDRTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHH VACALVLVALDVDDDIIMEDYLLTNQYFRRDAAAHPELPRDVLEAIGTVQASFLAAALDT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRQDYGDLEAYLRDGLGVDGAAREALKQRYLTG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA