Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340352
Identifier: 146340352
GI number: 146340352
Start: 3575596
End: 3577794
Strand: Reverse
Name: 146340352
Synonym: BRADO3379
Alternate gene names: NA
Gene position: 3577794-3575596 (Counterclockwise)
Preceding gene: 146340353
Following gene: 146340351
Centisome position: 47.98
GC content: 70.21
Gene sequence:
>2199_bases TTGGATCGAACGGCGACCCGCGCTCTGCGCGCGACATCGCCAATGGGGAGACAGAACATGAGCAGCTTCGATAACGGGTT CAATCAGGATAACGGCTTCGGCCAGCAGGTCGGAGACGGCGTGTCGTCAGGTCTGGCGACGGCGGGTGAGGCCATCGGAG GTGATACCGGGGCCGCCCTGTCATCGGCCGGCGATACCGTCGGTCACCTCGCCGGCGACGTTGCGGGCATCGCAGGCGGC GGCGATGGCGCGCTTGCGGCGGGAGGCGACGCGCTTCACACAATCGGCGACTTGGCCGGCGGTGACGTCGGCGATGTGCT GACCTCGATCGGCGATGTGCTGAAAGACGGCACCGAGGGGATCGGCGACAAGGCCGGCGACGCGATCGGGTCGGCGATCG GCGACCTTGGCCACGCCATCGGCGGTGACGTCGGGGACGCCATCGGCGGCGCCGCCGACGTCATCGGCGATGTCGCCGGA GACTTGGTCGGCGGGGCGCTGGGCGCTTTGACCGGTGGTCCCGGCGGCCTTGCCGACGCCGCGCAAGGCGCGCTTGGCGC CATCGAGCATGCGGCCGCCGGAGCAGCAGATGGAATTGCTGGCGCGATCGGCGGCGACCTCGGCCAGGATGTGGCCGGCC TTGTCAATGCAGTCGGCGATGTCGCCGGCGCGGTGAACGGAGCCATCGGCGCGATCGAGGGAGCCGGCAGCGCTGTCGGT GGCATCATCGGTGACGCGGTCGGTGCCGCAGAAGGGATTGGCGGCGCGGTGGTCGGCGCCATCACGGGCGCGGACAGCGT GGGACATGCGGTCGACGGCATCATTGGCGGCAGCTTCGGCGCAGTCGAAGGAGCCGTCGAGGGCGCGGCCGCTGGACTGG GAGGCGTGGTCGAAGGTGTCACCGGCGCCGTCGACGGTGCCCTGGGCGCTGTCGGCGACGTGGTCGGCGCGACGGGCGGG CTTCTCGGAGATGCTGGTCAGGGCCTGGAGAACCTCGGCAACAACATCGGGGGTACGGCGGGCGACATCATCGGCGGCAT CGGCGCCGGGCTCGAGGGCGCGGGATCTGCCCTGAACGATGTCGGCGGCTTCTTCAATTCAGCCGGCGGCGCCATCGGTG ACCTCGGCGGGGCGGTCGGTGGCGCCATTGGCGCAGCCGGGGGTGCAATCGGCGGCGCCATCGGAGACGTCGGACACGCC GCGGGCGATGCGATCGGCGGGATCGTCAATGAAGTGGGCGGCGCGATCGGCGATGCTGTGGGTGGTGCTGTCGATGCCGT CGGCGGGGCCATCGGAGACGCCGTCGGCGCGGTGGGCGACGCGATCGGCGGCGTGGTCGACGCAATCGGCGGCCTGTTCA GCGGCGGGCATGATAACGGCGGCTCCAGCGGCGGCGGTGAGGCCAACAATGGCGATCATGGCGGAAACAGCGGCGGCGGC GACAATGCAGGAGGCGGCAACGAGGGTGGCGGCCACGAAGGCAGCGGCAACGAGGGCGGCGGCTCCGGAGAGGGCGCTGG GAACGGCAATGGCGGCGGCGAGAGCGGCATGCCGGACCCGGAGGGAAGCGGCTCGGGCGGCGTGAACTCCTCGCCGAATC CGGACGGCGGGGACACCGATGGCAATGACGGCAACAGCCACATTTCCGTCGTCGGACACGGCCATGGCGGCGGCGGTGAT GGCAGTGGCGAGGGCGTGGGCGATCTTGGTGACATGCTGGGTGCTCCCGGCAGTCACGGCTCGCACGGTTCGGGCGGAGT CAACCCGTTCCACGATCCCGGCGAGGAAATGCCAAATCCGGACGATTCCGGTTCGGGCGGACCGACCAGCAACATCGCGC ATGTCCTCGCGTCCGCAGACCTTGCGGCAGCCGCCGGCCATGGCGGCGAGAGCAGCATTATCATCGTCGGCGGCAGCTTC TGGGATCAGGCGGCGGGCGCAGCCCATGACGGCAGTTCGTCCACACATCTCGGCGCGGCGATTGCGGATCACGGTCTCGC CCAGCCGGCCATCGCGGATGTCGGTGCGGCCGGCATCAGCACGCATGATCTCTCCTCTGCGCTCGACAGTGGCGCCGCTC ACGCCATGCTCGGCCATGGCCTATCCGACGCGGGGCTGGCCCATGCCGGCGACCTCGGGTCGATCACGCTGCACGACATG TCGCTCGGCAACGCATTCGCCCATCAGATGCATATCTGA
Upstream 100 bases:
>100_bases AGGCATGATCAGGGATTGTGAGCTCGGTCACGTCTGACCGTGACCCGTGATCCAGCGCACATTCCCCGACTGTCGATAGC AGCGATCCTCTCCCCGCAAT
Downstream 100 bases:
>100_bases CGAGCCGCTTGGAACGGGAGCCGCAGCCGTAATGCGGCGGCTTCCGGCCCTGCCGAGACATATGTGACGCGCCGCACAGA AGGAGACGTTCAAGTCCCGT
Product: PE-PGRS family protein (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MDRTATRALRATSPMGRQNMSSFDNGFNQDNGFGQQVGDGVSSGLATAGEAIGGDTGAALSSAGDTVGHLAGDVAGIAGG GDGALAAGGDALHTIGDLAGGDVGDVLTSIGDVLKDGTEGIGDKAGDAIGSAIGDLGHAIGGDVGDAIGGAADVIGDVAG DLVGGALGALTGGPGGLADAAQGALGAIEHAAAGAADGIAGAIGGDLGQDVAGLVNAVGDVAGAVNGAIGAIEGAGSAVG GIIGDAVGAAEGIGGAVVGAITGADSVGHAVDGIIGGSFGAVEGAVEGAAAGLGGVVEGVTGAVDGALGAVGDVVGATGG LLGDAGQGLENLGNNIGGTAGDIIGGIGAGLEGAGSALNDVGGFFNSAGGAIGDLGGAVGGAIGAAGGAIGGAIGDVGHA AGDAIGGIVNEVGGAIGDAVGGAVDAVGGAIGDAVGAVGDAIGGVVDAIGGLFSGGHDNGGSSGGGEANNGDHGGNSGGG DNAGGGNEGGGHEGSGNEGGGSGEGAGNGNGGGESGMPDPEGSGSGGVNSSPNPDGGDTDGNDGNSHISVVGHGHGGGGD GSGEGVGDLGDMLGAPGSHGSHGSGGVNPFHDPGEEMPNPDDSGSGGPTSNIAHVLASADLAAAAGHGGESSIIIVGGSF WDQAAGAAHDGSSSTHLGAAIADHGLAQPAIADVGAAGISTHDLSSALDSGAAHAMLGHGLSDAGLAHAGDLGSITLHDM SLGNAFAHQMHI
Sequences:
>Translated_732_residues MDRTATRALRATSPMGRQNMSSFDNGFNQDNGFGQQVGDGVSSGLATAGEAIGGDTGAALSSAGDTVGHLAGDVAGIAGG GDGALAAGGDALHTIGDLAGGDVGDVLTSIGDVLKDGTEGIGDKAGDAIGSAIGDLGHAIGGDVGDAIGGAADVIGDVAG DLVGGALGALTGGPGGLADAAQGALGAIEHAAAGAADGIAGAIGGDLGQDVAGLVNAVGDVAGAVNGAIGAIEGAGSAVG GIIGDAVGAAEGIGGAVVGAITGADSVGHAVDGIIGGSFGAVEGAVEGAAAGLGGVVEGVTGAVDGALGAVGDVVGATGG LLGDAGQGLENLGNNIGGTAGDIIGGIGAGLEGAGSALNDVGGFFNSAGGAIGDLGGAVGGAIGAAGGAIGGAIGDVGHA AGDAIGGIVNEVGGAIGDAVGGAVDAVGGAIGDAVGAVGDAIGGVVDAIGGLFSGGHDNGGSSGGGEANNGDHGGNSGGG DNAGGGNEGGGHEGSGNEGGGSGEGAGNGNGGGESGMPDPEGSGSGGVNSSPNPDGGDTDGNDGNSHISVVGHGHGGGGD GSGEGVGDLGDMLGAPGSHGSHGSGGVNPFHDPGEEMPNPDDSGSGGPTSNIAHVLASADLAAAAGHGGESSIIIVGGSF WDQAAGAAHDGSSSTHLGAAIADHGLAQPAIADVGAAGISTHDLSSALDSGAAHAMLGHGLSDAGLAHAGDLGSITLHDM SLGNAFAHQMHI >Mature_732_residues MDRTATRALRATSPMGRQNMSSFDNGFNQDNGFGQQVGDGVSSGLATAGEAIGGDTGAALSSAGDTVGHLAGDVAGIAGG GDGALAAGGDALHTIGDLAGGDVGDVLTSIGDVLKDGTEGIGDKAGDAIGSAIGDLGHAIGGDVGDAIGGAADVIGDVAG DLVGGALGALTGGPGGLADAAQGALGAIEHAAAGAADGIAGAIGGDLGQDVAGLVNAVGDVAGAVNGAIGAIEGAGSAVG GIIGDAVGAAEGIGGAVVGAITGADSVGHAVDGIIGGSFGAVEGAVEGAAAGLGGVVEGVTGAVDGALGAVGDVVGATGG LLGDAGQGLENLGNNIGGTAGDIIGGIGAGLEGAGSALNDVGGFFNSAGGAIGDLGGAVGGAIGAAGGAIGGAIGDVGHA AGDAIGGIVNEVGGAIGDAVGGAVDAVGGAIGDAVGAVGDAIGGVVDAIGGLFSGGHDNGGSSGGGEANNGDHGGNSGGG DNAGGGNEGGGHEGSGNEGGGSGEGAGNGNGGGESGMPDPEGSGSGGVNSSPNPDGGDTDGNDGNSHISVVGHGHGGGGD GSGEGVGDLGDMLGAPGSHGSHGSGGVNPFHDPGEEMPNPDDSGSGGPTSNIAHVLASADLAAAAGHGGESSIIIVGGSF WDQAAGAAHDGSSSTHLGAAIADHGLAQPAIADVGAAGISTHDLSSALDSGAAHAMLGHGLSDAGLAHAGDLGSITLHDM SLGNAFAHQMHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65472; Mature: 65472
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTATRALRATSPMGRQNMSSFDNGFNQDNGFGQQVGDGVSSGLATAGEAIGGDTGAAL CCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH SSAGDTVGHLAGDVAGIAGGGDGALAAGGDALHTIGDLAGGDVGDVLTSIGDVLKDGTEG HHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC IGDKAGDAIGSAIGDLGHAIGGDVGDAIGGAADVIGDVAGDLVGGALGALTGGPGGLADA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AQGALGAIEHAAAGAADGIAGAIGGDLGQDVAGLVNAVGDVAGAVNGAIGAIEGAGSAVG HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH GIIGDAVGAAEGIGGAVVGAITGADSVGHAVDGIIGGSFGAVEGAVEGAAAGLGGVVEGV HHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TGAVDGALGAVGDVVGATGGLLGDAGQGLENLGNNIGGTAGDIIGGIGAGLEGAGSALND HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHCCCCHHHHHHHHCCCCCCCCHHHHH VGGFFNSAGGAIGDLGGAVGGAIGAAGGAIGGAIGDVGHAAGDAIGGIVNEVGGAIGDAV HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGAVDAVGGAIGDAVGAVGDAIGGVVDAIGGLFSGGHDNGGSSGGGEANNGDHGGNSGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DNAGGGNEGGGHEGSGNEGGGSGEGAGNGNGGGESGMPDPEGSGSGGVNSSPNPDGGDTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNDGNSHISVVGHGHGGGGDGSGEGVGDLGDMLGAPGSHGSHGSGGVNPFHDPGEEMPNP CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCC DDSGSGGPTSNIAHVLASADLAAAAGHGGESSIIIVGGSFWDQAAGAAHDGSSSTHLGAA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHH IADHGLAQPAIADVGAAGISTHDLSSALDSGAAHAMLGHGLSDAGLAHAGDLGSITLHDM HHHCCCCCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEEECC SLGNAFAHQMHI HHHHHHHHHCCC >Mature Secondary Structure MDRTATRALRATSPMGRQNMSSFDNGFNQDNGFGQQVGDGVSSGLATAGEAIGGDTGAAL CCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH SSAGDTVGHLAGDVAGIAGGGDGALAAGGDALHTIGDLAGGDVGDVLTSIGDVLKDGTEG HHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC IGDKAGDAIGSAIGDLGHAIGGDVGDAIGGAADVIGDVAGDLVGGALGALTGGPGGLADA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AQGALGAIEHAAAGAADGIAGAIGGDLGQDVAGLVNAVGDVAGAVNGAIGAIEGAGSAVG HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH GIIGDAVGAAEGIGGAVVGAITGADSVGHAVDGIIGGSFGAVEGAVEGAAAGLGGVVEGV HHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TGAVDGALGAVGDVVGATGGLLGDAGQGLENLGNNIGGTAGDIIGGIGAGLEGAGSALND HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHCCCCHHHHHHHHCCCCCCCCHHHHH VGGFFNSAGGAIGDLGGAVGGAIGAAGGAIGGAIGDVGHAAGDAIGGIVNEVGGAIGDAV HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGAVDAVGGAIGDAVGAVGDAIGGVVDAIGGLFSGGHDNGGSSGGGEANNGDHGGNSGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DNAGGGNEGGGHEGSGNEGGGSGEGAGNGNGGGESGMPDPEGSGSGGVNSSPNPDGGDTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNDGNSHISVVGHGHGGGGDGSGEGVGDLGDMLGAPGSHGSHGSGGVNPFHDPGEEMPNP CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCC DDSGSGGPTSNIAHVLASADLAAAAGHGGESSIIIVGGSFWDQAAGAAHDGSSSTHLGAA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHH IADHGLAQPAIADVGAAGISTHDLSSALDSGAAHAMLGHGLSDAGLAHAGDLGSITLHDM HHHCCCCCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEEECC SLGNAFAHQMHI HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA