Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340345
Identifier: 146340345
GI number: 146340345
Start: 3566816
End: 3568588
Strand: Reverse
Name: 146340345
Synonym: BRADO3372
Alternate gene names: NA
Gene position: 3568588-3566816 (Counterclockwise)
Preceding gene: 146340347
Following gene: 146340344
Centisome position: 47.86
GC content: 66.22
Gene sequence:
>1773_bases ATGCTCTGCGTTCGTGTGGCCGCCAGGGGGCGGTTCTTTTGTGCCGCCATCGTTTCAGTGCCGCTCGTTCTCGCAACGAC ATCCTGGGCTGACGCAGCGTCCTATTACTATTGGAACGACCAAGAGCCCGTCACCATCGCTCCGCCTGCCCGTCCCGTCG CGCCGCGCAAGGCCAAGGCTCGCCACGGTCAGAAGCCGGCCACGATCGAGAAGGAAGCGGCCAAGCCGCTCGGACCTGTC ACGATCGCGGTGTCGATCAGCAAGCAGCAGCTCAAGATCTACGACGCCAACGGCCTGTTCGCCGAGGCGCCGGTGTCGAC CGGCATGAAGGGACACGCGACGCCAATGGGCGTGTTCAGCGTCATCCAAAAGCAGAAATTCCATCGCTCCAACATCTACA GCGGCGCGCCGATGCCGTTCATGCAGCGGATCACCTGGTCGGGCGTCGCGCTGCACGCCGGTGTGCTGCCCGGCTACCCC GCCTCGCATGGCTGCATCCGCATGCCCGCGAGCTTCGCACCCAGAATTTACGGCTGGACGCGGATGGGATCGCGCGTGCT CGTGACGCCCGGCGAGGTCGCTCCCGCCAGCTTCTCGCATCCGCTGCTCGCCGCGTTGAAGGCGCCGCAGCCGAGCGCCT CGATTCAACCTGATGCGAATGCGCCCACCACGACCAAGTCGGACAAGGGCGCGGCGCTGGCCCCGACCATCACCGTCGCG ACGATCGATCTGCGCGCCACGATCGGCCATGGCGAAGGCGTACGTGCCGCCGATGATGCGATGTCGGCCGCGCGCCAGCT CCGCACCGCCGATGCCAGCAACGCGGGCGGACTGCCGGCGATGGCCTCCGATGCACCTCCGGCCGCGCACCCCGAGCAGA CGGGCCAGACCAGGGCTCAAGATGTTGCGAACGATCTGAAGCCCGCCATCGCCGAGACGCCAGCGTCGAGCGCCGAGGCG AACACTGCCGTTGAGCCCGCGCCCGTCTTGGCAAACCAGCCGGCCGAGGCTGTTCAAGTAGCTCCGATAGAAAAGACCAC GGAGGCGCCGACCAAGTCGGAAGTAACGGGCTCGACCGATCTCACGGCAGCCGATGCCAAGGCTTCCGATACGAAGGCTT CTGACACGAAGGCTTCCGATACGAAGTCTGCAGACGTCAAGCCAGCCGATGCCAAGAATTCCGAGCAACCCGTTGCGCCC TCGACGGCGACTGTCGAAGCGCCGGCAAGGCCGGTCGACGACAAGGATGTTTCAAAGGATCAGTCGCGCGTGGCCGCGCC GGACAAGCCGATCGCGCCGAAGCCCGAGCTGAAGCGAAACAGCCAGATCGCGATCTTCATCAGCCGCAAGGACTCCAAGC TCTACGTCCGGCAGAACTTCGCGCCTGTGTTCAACACACCGATCGCTATCGCGCCGTCTGACAAGCCGCTGGGCACCCAC GTGTTCACGGCGGCCGCGGACAAGGCCGATCCGGCGACAATGCGCTGGTCGGTCATCTCGCTGCCCGCCACCGCGCGCAG CGTCGCGGCGAGCGAGGGCGCGGACAAAGCCGTCCGGCGGGGCAAGAAATCCGCGGAAGCCAAAGTCGACGCGAAGCCGG TCGTGCTGCAGAGCTCTCCGGCCGAGGCGCTCGACCGCATCACCATTCCCGCCGATATCATGGCCTGGCTCGGCGAAGCG CTGTCGGCTGGCAGCTCGCTGATCGTCTCCGACCAGGGCATCAACCAGGGCGAGACCGGCGAAGGCACCGAGTTCATCGT TTCGCTGCGCTGA
Upstream 100 bases:
>100_bases CGATTGGAACGAAAATCACCTCGGGCAGAAGCCCCAAGCTGGTGAACGCGGACTCCGTCTGCGACACTAAAGACCAGATG GTTCTTGAGGATTTGCCGGA
Downstream 100 bases:
>100_bases GGACGGACGACGTCCCTGTTTCCGCCTCAGCGTAGGGGTATCTCCCTGCGGGAGAGCAGTCTGATCCAACGCGAACGCGT GGCCGTTTGACAAGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Protein ErfK Family
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MLCVRVAARGRFFCAAIVSVPLVLATTSWADAASYYYWNDQEPVTIAPPARPVAPRKAKARHGQKPATIEKEAAKPLGPV TIAVSISKQQLKIYDANGLFAEAPVSTGMKGHATPMGVFSVIQKQKFHRSNIYSGAPMPFMQRITWSGVALHAGVLPGYP ASHGCIRMPASFAPRIYGWTRMGSRVLVTPGEVAPASFSHPLLAALKAPQPSASIQPDANAPTTTKSDKGAALAPTITVA TIDLRATIGHGEGVRAADDAMSAARQLRTADASNAGGLPAMASDAPPAAHPEQTGQTRAQDVANDLKPAIAETPASSAEA NTAVEPAPVLANQPAEAVQVAPIEKTTEAPTKSEVTGSTDLTAADAKASDTKASDTKASDTKSADVKPADAKNSEQPVAP STATVEAPARPVDDKDVSKDQSRVAAPDKPIAPKPELKRNSQIAIFISRKDSKLYVRQNFAPVFNTPIAIAPSDKPLGTH VFTAAADKADPATMRWSVISLPATARSVAASEGADKAVRRGKKSAEAKVDAKPVVLQSSPAEALDRITIPADIMAWLGEA LSAGSSLIVSDQGINQGETGEGTEFIVSLR
Sequences:
>Translated_590_residues MLCVRVAARGRFFCAAIVSVPLVLATTSWADAASYYYWNDQEPVTIAPPARPVAPRKAKARHGQKPATIEKEAAKPLGPV TIAVSISKQQLKIYDANGLFAEAPVSTGMKGHATPMGVFSVIQKQKFHRSNIYSGAPMPFMQRITWSGVALHAGVLPGYP ASHGCIRMPASFAPRIYGWTRMGSRVLVTPGEVAPASFSHPLLAALKAPQPSASIQPDANAPTTTKSDKGAALAPTITVA TIDLRATIGHGEGVRAADDAMSAARQLRTADASNAGGLPAMASDAPPAAHPEQTGQTRAQDVANDLKPAIAETPASSAEA NTAVEPAPVLANQPAEAVQVAPIEKTTEAPTKSEVTGSTDLTAADAKASDTKASDTKASDTKSADVKPADAKNSEQPVAP STATVEAPARPVDDKDVSKDQSRVAAPDKPIAPKPELKRNSQIAIFISRKDSKLYVRQNFAPVFNTPIAIAPSDKPLGTH VFTAAADKADPATMRWSVISLPATARSVAASEGADKAVRRGKKSAEAKVDAKPVVLQSSPAEALDRITIPADIMAWLGEA LSAGSSLIVSDQGINQGETGEGTEFIVSLR >Mature_590_residues MLCVRVAARGRFFCAAIVSVPLVLATTSWADAASYYYWNDQEPVTIAPPARPVAPRKAKARHGQKPATIEKEAAKPLGPV TIAVSISKQQLKIYDANGLFAEAPVSTGMKGHATPMGVFSVIQKQKFHRSNIYSGAPMPFMQRITWSGVALHAGVLPGYP ASHGCIRMPASFAPRIYGWTRMGSRVLVTPGEVAPASFSHPLLAALKAPQPSASIQPDANAPTTTKSDKGAALAPTITVA TIDLRATIGHGEGVRAADDAMSAARQLRTADASNAGGLPAMASDAPPAAHPEQTGQTRAQDVANDLKPAIAETPASSAEA NTAVEPAPVLANQPAEAVQVAPIEKTTEAPTKSEVTGSTDLTAADAKASDTKASDTKASDTKSADVKPADAKNSEQPVAP STATVEAPARPVDDKDVSKDQSRVAAPDKPIAPKPELKRNSQIAIFISRKDSKLYVRQNFAPVFNTPIAIAPSDKPLGTH VFTAAADKADPATMRWSVISLPATARSVAASEGADKAVRRGKKSAEAKVDAKPVVLQSSPAEALDRITIPADIMAWLGEA LSAGSSLIVSDQGINQGETGEGTEFIVSLR
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61455; Mature: 61455
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCVRVAARGRFFCAAIVSVPLVLATTSWADAASYYYWNDQEPVTIAPPARPVAPRKAKA CEEEEEECCCCHHHHHHHHHCHHEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHH RHGQKPATIEKEAAKPLGPVTIAVSISKQQLKIYDANGLFAEAPVSTGMKGHATPMGVFS HCCCCCCCCCHHHCCCCCCEEEEEEECCCEEEEEECCCCEEECCHHCCCCCCCCHHHHHH VIQKQKFHRSNIYSGAPMPFMQRITWSGVALHAGVLPGYPASHGCIRMPASFAPRIYGWT HHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEECCHHHCCCCEEHH RMGSRVLVTPGEVAPASFSHPLLAALKAPQPSASIQPDANAPTTTKSDKGAALAPTITVA HCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEE TIDLRATIGHGEGVRAADDAMSAARQLRTADASNAGGLPAMASDAPPAAHPEQTGQTRAQ EEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DVANDLKPAIAETPASSAEANTAVEPAPVLANQPAEAVQVAPIEKTTEAPTKSEVTGSTD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCC LTAADAKASDTKASDTKASDTKSADVKPADAKNSEQPVAPSTATVEAPARPVDDKDVSKD CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC QSRVAAPDKPIAPKPELKRNSQIAIFISRKDSKLYVRQNFAPVFNTPIAIAPSDKPLGTH HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHCCCEEECCCCCCCCCE VFTAAADKADPATMRWSVISLPATARSVAASEGADKAVRRGKKSAEAKVDAKPVVLQSSP EEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEECCC AEALDRITIPADIMAWLGEALSAGSSLIVSDQGINQGETGEGTEFIVSLR HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MLCVRVAARGRFFCAAIVSVPLVLATTSWADAASYYYWNDQEPVTIAPPARPVAPRKAKA CEEEEEECCCCHHHHHHHHHCHHEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHH RHGQKPATIEKEAAKPLGPVTIAVSISKQQLKIYDANGLFAEAPVSTGMKGHATPMGVFS HCCCCCCCCCHHHCCCCCCEEEEEEECCCEEEEEECCCCEEECCHHCCCCCCCCHHHHHH VIQKQKFHRSNIYSGAPMPFMQRITWSGVALHAGVLPGYPASHGCIRMPASFAPRIYGWT HHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEECCHHHCCCCEEHH RMGSRVLVTPGEVAPASFSHPLLAALKAPQPSASIQPDANAPTTTKSDKGAALAPTITVA HCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEE TIDLRATIGHGEGVRAADDAMSAARQLRTADASNAGGLPAMASDAPPAAHPEQTGQTRAQ EEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DVANDLKPAIAETPASSAEANTAVEPAPVLANQPAEAVQVAPIEKTTEAPTKSEVTGSTD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCC LTAADAKASDTKASDTKASDTKSADVKPADAKNSEQPVAPSTATVEAPARPVDDKDVSKD CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC QSRVAAPDKPIAPKPELKRNSQIAIFISRKDSKLYVRQNFAPVFNTPIAIAPSDKPLGTH HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHCCCEEECCCCCCCCCE VFTAAADKADPATMRWSVISLPATARSVAASEGADKAVRRGKKSAEAKVDAKPVVLQSSP EEEECCCCCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEECCC AEALDRITIPADIMAWLGEALSAGSSLIVSDQGINQGETGEGTEFIVSLR HHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA