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The map label for this gene is feaR [H]

Identifier: 146340264

GI number: 146340264

Start: 3483735

End: 3484718

Strand: Reverse

Name: feaR [H]

Synonym: BRADO3285

Alternate gene names: 146340264

Gene position: 3484718-3483735 (Counterclockwise)

Preceding gene: 146340267

Following gene: 146340262

Centisome position: 46.73

GC content: 67.58

Gene sequence:

>984_bases
ATGACTGGCGCAGCATCGGAACGTCAGCGGAGCTGGAACACCGCCATGGTGCGGCCGGCGGAGCAGTTCTCCTACTACCG
CGAAGCGATCTGCCAGGCCTTCATGAACCTGACGCCGGAGCCGCCGCGCCGCCACGGCTTTTCAGCGGAGGTGCAGCACA
TCAGTCTCGGCCGCGGCGCCATCAATCGCGTGACCTTCCCCGAACATACGGTGCGCCGCTCGCGCACGGACATCGCGGCC
TCCGACCAGCGCTGCTTCTATCTGAACCTCAAGCTCGCCGGCCGCTGCACGATCCTGCAGGACCAGCACGAGGTCAGCCT
GTCGACCGGACAGGTCGGCATCTTCGACAGCCACCGTACTTTCGAGCTGCGGCACGATCGCGGACCTTCGCTCGGCGTCA
TTTCGTTTCGCGTCCCCGCTGACGCGCTATTCGGCCGGCTGCCGACCATTTCGGAGGTTGCGCCGACGCGGCTGTCCGAT
GATCCCTGCCTCGGCGCGCTGATCGTCGAGACCGCGCGCTCCCTGAATGCCAATGCGCTCCGGCTCGTGCCCGACGATGC
CGCGGCGCTGTTTGACGTTCTGCTCGACCTGGTCGCGCTCAGCGTCTCACGCCGCACGCGCAACGAGGCCTTCGCTACGG
CATCCTTTGCCGACGCCACCACGTTGGCGGTGCGCCGCGCCATTCACGAGCGGCTGCGCGAGCCGGGCCTGACGGTCGCG
ACCATTGCGTCGGTTGTCGGGATCAGCGAGCGTTACGTGCACAAGCTTTTGGCGCGCGCCGGCACCAGCTTTTCCGACCT
CGTGATGCAGCGCAGGCTCGACGGCATCGCGCGAGACCTCCGCGATCCCGCCTGCGCGGGCCGCGACATCGGCCGTATCG
CCTTCGACTGGGGCTTTTCGGATCTGTCGCATTTTACGCGCCGCTTCAAGCAGCGCTTCGGCCTGCGCCCGCGCGACTGG
CGCGCGCAGGCGAACTCAGGCTGA

Upstream 100 bases:

>100_bases
GGTTCCTTTGCACGATGAAGGGACGGTGCAAGGAAGATGGGCCGGGCGGCGTTCGCCGCGCTTGGCTGCGACTGAACCCG
AATGGTCTCGGAGTGAACTG

Downstream 100 bases:

>100_bases
AAGCCGCCGCGCATTGGCGGCGACGTGCTCGCGATAGCGGCCCACGATGGCTGCAGCCGACGCACCGGCGCACAGGCCGG
CGGCAGCCTCGAACGCGGCC

Product: AraC/XylS family transcription factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTGAASERQRSWNTAMVRPAEQFSYYREAICQAFMNLTPEPPRRHGFSAEVQHISLGRGAINRVTFPEHTVRRSRTDIAA
SDQRCFYLNLKLAGRCTILQDQHEVSLSTGQVGIFDSHRTFELRHDRGPSLGVISFRVPADALFGRLPTISEVAPTRLSD
DPCLGALIVETARSLNANALRLVPDDAAALFDVLLDLVALSVSRRTRNEAFATASFADATTLAVRRAIHERLREPGLTVA
TIASVVGISERYVHKLLARAGTSFSDLVMQRRLDGIARDLRDPACAGRDIGRIAFDWGFSDLSHFTRRFKQRFGLRPRDW
RAQANSG

Sequences:

>Translated_327_residues
MTGAASERQRSWNTAMVRPAEQFSYYREAICQAFMNLTPEPPRRHGFSAEVQHISLGRGAINRVTFPEHTVRRSRTDIAA
SDQRCFYLNLKLAGRCTILQDQHEVSLSTGQVGIFDSHRTFELRHDRGPSLGVISFRVPADALFGRLPTISEVAPTRLSD
DPCLGALIVETARSLNANALRLVPDDAAALFDVLLDLVALSVSRRTRNEAFATASFADATTLAVRRAIHERLREPGLTVA
TIASVVGISERYVHKLLARAGTSFSDLVMQRRLDGIARDLRDPACAGRDIGRIAFDWGFSDLSHFTRRFKQRFGLRPRDW
RAQANSG
>Mature_326_residues
TGAASERQRSWNTAMVRPAEQFSYYREAICQAFMNLTPEPPRRHGFSAEVQHISLGRGAINRVTFPEHTVRRSRTDIAAS
DQRCFYLNLKLAGRCTILQDQHEVSLSTGQVGIFDSHRTFELRHDRGPSLGVISFRVPADALFGRLPTISEVAPTRLSDD
PCLGALIVETARSLNANALRLVPDDAAALFDVLLDLVALSVSRRTRNEAFATASFADATTLAVRRAIHERLREPGLTVAT
IASVVGISERYVHKLLARAGTSFSDLVMQRRLDGIARDLRDPACAGRDIGRIAFDWGFSDLSHFTRRFKQRFGLRPRDWR
AQANSG

Specific function: Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787649, Length=262, Percent_Identity=27.8625954198473, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36418; Mature: 36287

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAASERQRSWNTAMVRPAEQFSYYREAICQAFMNLTPEPPRRHGFSAEVQHISLGRGA
CCCCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCCC
INRVTFPEHTVRRSRTDIAASDQRCFYLNLKLAGRCTILQDQHEVSLSTGQVGIFDSHRT
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEECCCCCEEECCCCEEEECCCCE
FELRHDRGPSLGVISFRVPADALFGRLPTISEVAPTRLSDDPCLGALIVETARSLNANAL
EEEECCCCCCEEEEEEECCHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEE
RLVPDDAAALFDVLLDLVALSVSRRTRNEAFATASFADATTLAVRRAIHERLREPGLTVA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TIASVVGISERYVHKLLARAGTSFSDLVMQRRLDGIARDLRDPACAGRDIGRIAFDWGFS
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCHH
DLSHFTRRFKQRFGLRPRDWRAQANSG
HHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGAASERQRSWNTAMVRPAEQFSYYREAICQAFMNLTPEPPRRHGFSAEVQHISLGRGA
CCCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCCC
INRVTFPEHTVRRSRTDIAASDQRCFYLNLKLAGRCTILQDQHEVSLSTGQVGIFDSHRT
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEECCCCCEEECCCCEEEECCCCE
FELRHDRGPSLGVISFRVPADALFGRLPTISEVAPTRLSDDPCLGALIVETARSLNANAL
EEEECCCCCCEEEEEEECCHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEE
RLVPDDAAALFDVLLDLVALSVSRRTRNEAFATASFADATTLAVRRAIHERLREPGLTVA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TIASVVGISERYVHKLLARAGTSFSDLVMQRRLDGIARDLRDPACAGRDIGRIAFDWGFS
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCHH
DLSHFTRRFKQRFGLRPRDWRAQANSG
HHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631685; 9043126; 9278503; 9109378 [H]