| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340245
Identifier: 146340245
GI number: 146340245
Start: 3465976
End: 3466848
Strand: Reverse
Name: 146340245
Synonym: BRADO3265
Alternate gene names: NA
Gene position: 3466848-3465976 (Counterclockwise)
Preceding gene: 146340246
Following gene: 146340244
Centisome position: 46.49
GC content: 65.41
Gene sequence:
>873_bases GTGAACGAAAATGTCGAGGCTTGCCATGTGCGCCCGCTGAAAAACAAGTGGACCGAGCATGCCGAGCGCAACGCCATCTA TAAAGCTGCCGCGCGTGGCGTCAGCACACTCGGCTGCACGATCTATCTCTCATGGTTTCCGTGCAGCGATTGCGCTCGCG CGATCATTCAGTCCGGCATCGAGCGCCTGATCTGTGTGGCGTCCGAGCCGGACGATCCGCAATGGTCCGAGGACATACGC TTCATCCTCATGGCGAGGAGCGACCGCAAGCGCGTGCTGTGGCCGATGCCGACCCATGCCCGCGTGCCGGCGAGCGGCAA CCTCTCGTTGTTCGGCGACATGAAGCCGTGGCGCCCGGCGCGCGACATCATCGACTGGAAGATCAAGGGCCGCTCGATCT ATGACCGGAAGAAGCCGCTCGCCCCTGCGACGCTGGCGCGCATCCATGCCGGCGCCGTCAAGTTCGGCTGGCCTGAGCCC TTCATCGTCACGCTGCGCAACCACATGGCGGCGCACGGGGTCGACCAGCCTATCCCGACCATCGCGGCGAACGGAACGCA TATCGGGCTGGCAGAGCCGTTCCTCCTGAATCGCCACGGGGACGGCTACGGCGAGACGCGCGCTCATTCGATCGACGAGC CCGCTCCCACCGCGAACTGCGACGGCGGCGGCTACGTGGTCGAGCCGTTGGTCGTCAACCTAAAGGGCCAGTCGACGGCA CCGAAATTGAGTCGCCCCTGCCGACGCAGACAGCGCACGCCGGCCATCTCTATATCGCGGAGCCGTTCGTCTTCTCCCGC CATGCCGAGGGAGCCCCGCGCTCGGTCGACGAGCCGACTCCGACCCAGGTGGCCAAGCACTCGTATTGCCTGA
Upstream 100 bases:
>100_bases CGCCACGCAGAGCAAGGATCGCAGCCGCAAGATCGGTTGCGTGATAGTCGATCGCAACGACGTTTTAGTGCAAATGGGCT GGAAGGGCTTTCCCCGCCGC
Downstream 100 bases:
>100_bases TCTCGCCCTACTACGGCTCCGGATCTGGCGAGACCTGACAGAGCGCGTCCGAGCCGCTGCCGACGGTCACCTCGAAGGGG CGGTTCGGAATAGTGGTGCC
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine; DNA containing 5-methylcytosine
Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; Methylase; Prophage LambdaSo Type II DNA Methyltransferase; Prophage DNA Cytosine Methylase; Cytosine-Specific Methylase; DNA Methyltransferase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA
Sequences:
>Translated_290_residues MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA >Mature_290_residues MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.37
Molecular weight: Translated: 32328; Mature: 32328
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGI CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH ERLICVASEPDDPQWSEDIRFILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPA HHEEEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCH RDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEPFIVTLRNHMAAHGVDQPIPT HHCEEEEECCCEECCCCCCCCHHHHHHHHHCEEECCCCCCEEEHHHHHHHHCCCCCCCCE IAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA EECCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCCC PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGI CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH ERLICVASEPDDPQWSEDIRFILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPA HHEEEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCH RDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEPFIVTLRNHMAAHGVDQPIPT HHCEEEEECCCEECCCCCCCCHHHHHHHHHCEEECCCCCCEEEHHHHHHHHCCCCCCCCE IAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA EECCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCCC PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; DNA
Specific reaction: S-adenosyl-L-methionine + DNA = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA