Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146340245

Identifier: 146340245

GI number: 146340245

Start: 3465976

End: 3466848

Strand: Reverse

Name: 146340245

Synonym: BRADO3265

Alternate gene names: NA

Gene position: 3466848-3465976 (Counterclockwise)

Preceding gene: 146340246

Following gene: 146340244

Centisome position: 46.49

GC content: 65.41

Gene sequence:

>873_bases
GTGAACGAAAATGTCGAGGCTTGCCATGTGCGCCCGCTGAAAAACAAGTGGACCGAGCATGCCGAGCGCAACGCCATCTA
TAAAGCTGCCGCGCGTGGCGTCAGCACACTCGGCTGCACGATCTATCTCTCATGGTTTCCGTGCAGCGATTGCGCTCGCG
CGATCATTCAGTCCGGCATCGAGCGCCTGATCTGTGTGGCGTCCGAGCCGGACGATCCGCAATGGTCCGAGGACATACGC
TTCATCCTCATGGCGAGGAGCGACCGCAAGCGCGTGCTGTGGCCGATGCCGACCCATGCCCGCGTGCCGGCGAGCGGCAA
CCTCTCGTTGTTCGGCGACATGAAGCCGTGGCGCCCGGCGCGCGACATCATCGACTGGAAGATCAAGGGCCGCTCGATCT
ATGACCGGAAGAAGCCGCTCGCCCCTGCGACGCTGGCGCGCATCCATGCCGGCGCCGTCAAGTTCGGCTGGCCTGAGCCC
TTCATCGTCACGCTGCGCAACCACATGGCGGCGCACGGGGTCGACCAGCCTATCCCGACCATCGCGGCGAACGGAACGCA
TATCGGGCTGGCAGAGCCGTTCCTCCTGAATCGCCACGGGGACGGCTACGGCGAGACGCGCGCTCATTCGATCGACGAGC
CCGCTCCCACCGCGAACTGCGACGGCGGCGGCTACGTGGTCGAGCCGTTGGTCGTCAACCTAAAGGGCCAGTCGACGGCA
CCGAAATTGAGTCGCCCCTGCCGACGCAGACAGCGCACGCCGGCCATCTCTATATCGCGGAGCCGTTCGTCTTCTCCCGC
CATGCCGAGGGAGCCCCGCGCTCGGTCGACGAGCCGACTCCGACCCAGGTGGCCAAGCACTCGTATTGCCTGA

Upstream 100 bases:

>100_bases
CGCCACGCAGAGCAAGGATCGCAGCCGCAAGATCGGTTGCGTGATAGTCGATCGCAACGACGTTTTAGTGCAAATGGGCT
GGAAGGGCTTTCCCCGCCGC

Downstream 100 bases:

>100_bases
TCTCGCCCTACTACGGCTCCGGATCTGGCGAGACCTGACAGAGCGCGTCCGAGCCGCTGCCGACGGTCACCTCGAAGGGG
CGGTTCGGAATAGTGGTGCC

Product: hypothetical protein

Products: S-adenosyl-L-homocysteine; DNA containing 5-methylcytosine

Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; Methylase; Prophage LambdaSo Type II DNA Methyltransferase; Prophage DNA Cytosine Methylase; Cytosine-Specific Methylase; DNA Methyltransferase

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR
FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP
FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA
PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA

Sequences:

>Translated_290_residues
MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR
FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP
FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA
PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA
>Mature_290_residues
MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGIERLICVASEPDDPQWSEDIR
FILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPARDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEP
FIVTLRNHMAAHGVDQPIPTIAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA
PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.37

Molecular weight: Translated: 32328; Mature: 32328

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGI
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH
ERLICVASEPDDPQWSEDIRFILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPA
HHEEEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCH
RDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEPFIVTLRNHMAAHGVDQPIPT
HHCEEEEECCCEECCCCCCCCHHHHHHHHHCEEECCCCCCEEEHHHHHHHHCCCCCCCCE
IAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA
EECCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCCC
PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA
CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNENVEACHVRPLKNKWTEHAERNAIYKAAARGVSTLGCTIYLSWFPCSDCARAIIQSGI
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHH
ERLICVASEPDDPQWSEDIRFILMARSDRKRVLWPMPTHARVPASGNLSLFGDMKPWRPA
HHEEEEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCH
RDIIDWKIKGRSIYDRKKPLAPATLARIHAGAVKFGWPEPFIVTLRNHMAAHGVDQPIPT
HHCEEEEECCCEECCCCCCCCHHHHHHHHHCEEECCCCCCEEEHHHHHHHHCCCCCCCCE
IAANGTHIGLAEPFLLNRHGDGYGETRAHSIDEPAPTANCDGGGYVVEPLVVNLKGQSTA
EECCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCCC
PKLSRPCRRRQRTPAISISRSRSSSPAMPREPRARSTSRLRPRWPSTRIA
CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-adenosyl-L-methionine; DNA

Specific reaction: S-adenosyl-L-methionine + DNA = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA