| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ubiE [H]
Identifier: 146340233
GI number: 146340233
Start: 3456889
End: 3457698
Strand: Reverse
Name: ubiE [H]
Synonym: BRADO3252
Alternate gene names: 146340233
Gene position: 3457698-3456889 (Counterclockwise)
Preceding gene: 146340237
Following gene: 146340227
Centisome position: 46.37
GC content: 66.05
Gene sequence:
>810_bases ATGACGGCATCCGACAAGGCCTTCACCGGTTCGATCCCGCAGATCTACGACGAGCTGCTGGTTCCGCTGATCTTCACGCC CTATGCACATGATCTTGCAGGCCGTATTGCGAAGGCAAAGCCTGGCCAGGTGCTGGAGACGGCGGCGGGAACCGGCGTCG TGACCCGGGCGCTTCATGCGGCGCTGCCGCCGGAGGTGCGCATGACGGCCACCGACCTCAACGAACCCATGCTGATGCAG GCGAGGACCCATCTCGCCGGCGCTGACCGCATCAGCTTCCAACAGGCCGATGCGCTGGCCCTGCCCTTTGCCGATGCGAG CTTCGATGTCGTCGCGTGCCAGTTCGGCGTGATGTTCTTCCCGGATCGCGTCAAGGGCTATGCCGAGGCGCGCCGCGTGC TCAGGCCGGGCGGACGCTTCGTCTTTAACGTGTGGGACCGGATCGAGGACAACGAGTTCGCCCACGTGGTGCATGAGACG CTGCAACAGATCTTCTCAGACAACCCGCCCCAGTTCTTCACCCGCGCGCCGCATGGCTATTTCGATCCGGTGAAGATCCG GGCCGACCTGGGCGACGCCGGCTTCTCCGATATCATCATCGAGACGCTGCCTCACCGCAGCCGCGCCGCCTCTGCGCAGG AGCCCGCCATTGCCTACTGCCAGGGTACGCCGATGCGCGGCGAGATCGAGGCGCGGGGCACGCCGGACCTCGCCACCGTG ACGCAAGCGGCCGCGAACGCGATCCGGCAACGCTTCGGAGATGGACCGGTCGAGGGGCAGATCCAGGGGCTGGTGATTTC AGCCCGGTGA
Upstream 100 bases:
>100_bases CGCAGGCCCGATTGGCAAGACGCAGATGAGGGCGCGGACTTCGTCCGCCGACGACCACCGCCCTGACGTTTCTCCGCCAC ACCTGGAACAGGAGCCAGCC
Downstream 100 bases:
>100_bases GCGCCGCAGCTAGACCGTCGGCAGGACGGAGAACTCTTCGCCGGGCCGGCGCAGCGCGAGTTGATCGACCGTGGCCGGCG TGTCCGCGACATTGTCGACG
Product: ubiquinone/menaquinone biosynthesis methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTASDKAFTGSIPQIYDELLVPLIFTPYAHDLAGRIAKAKPGQVLETAAGTGVVTRALHAALPPEVRMTATDLNEPMLMQ ARTHLAGADRISFQQADALALPFADASFDVVACQFGVMFFPDRVKGYAEARRVLRPGGRFVFNVWDRIEDNEFAHVVHET LQQIFSDNPPQFFTRAPHGYFDPVKIRADLGDAGFSDIIIETLPHRSRAASAQEPAIAYCQGTPMRGEIEARGTPDLATV TQAAANAIRQRFGDGPVEGQIQGLVISAR
Sequences:
>Translated_269_residues MTASDKAFTGSIPQIYDELLVPLIFTPYAHDLAGRIAKAKPGQVLETAAGTGVVTRALHAALPPEVRMTATDLNEPMLMQ ARTHLAGADRISFQQADALALPFADASFDVVACQFGVMFFPDRVKGYAEARRVLRPGGRFVFNVWDRIEDNEFAHVVHET LQQIFSDNPPQFFTRAPHGYFDPVKIRADLGDAGFSDIIIETLPHRSRAASAQEPAIAYCQGTPMRGEIEARGTPDLATV TQAAANAIRQRFGDGPVEGQIQGLVISAR >Mature_268_residues TASDKAFTGSIPQIYDELLVPLIFTPYAHDLAGRIAKAKPGQVLETAAGTGVVTRALHAALPPEVRMTATDLNEPMLMQA RTHLAGADRISFQQADALALPFADASFDVVACQFGVMFFPDRVKGYAEARRVLRPGGRFVFNVWDRIEDNEFAHVVHETL QQIFSDNPPQFFTRAPHGYFDPVKIRADLGDAGFSDIIIETLPHRSRAASAQEPAIAYCQGTPMRGEIEARGTPDLATVT QAAANAIRQRFGDGPVEGQIQGLVISAR
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Escherichia coli, GI48994983, Length=101, Percent_Identity=34.6534653465347, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 29275; Mature: 29143
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDKAFTGSIPQIYDELLVPLIFTPYAHDLAGRIAKAKPGQVLETAAGTGVVTRALHA CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHH ALPPEVRMTATDLNEPMLMQARTHLAGADRISFQQADALALPFADASFDVVACQFGVMFF HCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCHHCCCEEEEECCCCCCCCEEEHHCCEEC PDRVKGYAEARRVLRPGGRFVFNVWDRIEDNEFAHVVHETLQQIFSDNPPQFFTRAPHGY CHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCC FDPVKIRADLGDAGFSDIIIETLPHRSRAASAQEPAIAYCQGTPMRGEIEARGTPDLATV CCCEEEEECCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCEEECCCCCCHHHH TQAAANAIRQRFGDGPVEGQIQGLVISAR HHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure TASDKAFTGSIPQIYDELLVPLIFTPYAHDLAGRIAKAKPGQVLETAAGTGVVTRALHA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHH ALPPEVRMTATDLNEPMLMQARTHLAGADRISFQQADALALPFADASFDVVACQFGVMFF HCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCHHCCCEEEEECCCCCCCCEEEHHCCEEC PDRVKGYAEARRVLRPGGRFVFNVWDRIEDNEFAHVVHETLQQIFSDNPPQFFTRAPHGY CHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCC FDPVKIRADLGDAGFSDIIIETLPHRSRAASAQEPAIAYCQGTPMRGEIEARGTPDLATV CCCEEEEECCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCEEECCCCCCHHHH TQAAANAIRQRFGDGPVEGQIQGLVISAR HHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA