| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yeeE [H]
Identifier: 146340173
GI number: 146340173
Start: 3390453
End: 3391553
Strand: Direct
Name: yeeE [H]
Synonym: BRADO3189
Alternate gene names: 146340173
Gene position: 3390453-3391553 (Clockwise)
Preceding gene: 146340172
Following gene: 146340174
Centisome position: 45.47
GC content: 71.12
Gene sequence:
>1101_bases GTGCTCACCGCATTGATCGACCTTCTGGGTGAGGAGCTGGTGTCGCTGCTGGGCGGGCTCGCGGTCGGCGGCGCGTTCGG CTTCTTCGCCCAGCGCAGCCGCTTCTGCCTGCGGGCGGCGACGATCGAGTTCGCGCGCGGGCAGGGCGGGCCGCGTCTGG CGGTGTGGCTCCTCACCTTCGCCTCGGCGCTGCTCGGCACCCAGGCGCTGGTGGCGATGGGCCTGCTCGATGTGTCCGAA GCGCGCCAGCTGGCACAGCAGGGCAGCATCTCCGGCGCGATGATCGGCGGCACCCTGTTCGGCTGCGGCATGATCCTGGC GCGCGGCTGTGCCAGCCGGCTCCTGGTGCTCTCGGCGAACGGCAATCTGCGGGCGCTGCTGTCCGGCTTGATCTTCGCGG TGACGGCGCAGTCTGCCTATCGTGGCCTGCTCGCGCCGGCGCGCGAGTGGCTCACCAATCTCTGGCTCGTCGACGGCGGG CCGTCCCGCGACATCATGAGCCTGTTCGGCGGCGGCACGCCCGAGAAGCTCGGCTTCGGCATGTTGTGGTTCGTGGCCGG CCTCGCCGCGGTGTCGAAGTTTCAGGTCGGCGCGAAGGTCCTGCGCTCGGCCGTGGCCGCGGGCGCGGCAGTCGTGGCGG GCTGGCTGCTGACGTATCAGCTCGGCCAGGCCTCGTTCGCGCCGGTGCCGCTGAAGAGCCTGACGTTCAGCGGGCCTTCC GCCGAGCTCCTGATGCAGGTGCTGGCCAGCCCCCAGCTGAAGCCGGGGTTCGACCTCGGCATCATCCCGGGCGTCTTTCT CGGCTCGTTCGTCGCCGCCGCGCTGGCCCGCGAGCTCAATCTCGAAGGCTTTTCCGACGGCCGCGGCATGCGGCGCTATC TGATCGGCGCCGTCCTCATGGGCTTCGGCGCGATGCTGGCCGGCGGCTGCGCGGTCGGGGCCGGCGTGACCGGAGCGTCG GTGTTCGCGCTGACGGCCTGGATCGTGCTCGGCGGCATGTGGATCGGCGCGGCGGTGACCGATTTCGTCGTCGATCGCTG GCTGTTCGGAGCCAAACGGGCGCAGCGCGACACACTGTCGAGCACGGCGGCGCCCTCATAA
Upstream 100 bases:
>100_bases CAGCAGAGCGGATATGCCTATCTGCGCCCGTAGCGGGTGCATGCGTCCCACCGAGGCCGCCCGGCGTGACCGCCGACAGA CCTGAACGACGAGAGCGCCC
Downstream 100 bases:
>100_bases TTTATATTCACAAGTTCGAATGTACGTATATAATGAGTGCACCAGCGCGGCATGCGCCGCGCGCGAGCAGGGAGGACAGG CGTCATGACGATCATGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLTALIDLLGEELVSLLGGLAVGGAFGFFAQRSRFCLRAATIEFARGQGGPRLAVWLLTFASALLGTQALVAMGLLDVSE ARQLAQQGSISGAMIGGTLFGCGMILARGCASRLLVLSANGNLRALLSGLIFAVTAQSAYRGLLAPAREWLTNLWLVDGG PSRDIMSLFGGGTPEKLGFGMLWFVAGLAAVSKFQVGAKVLRSAVAAGAAVVAGWLLTYQLGQASFAPVPLKSLTFSGPS AELLMQVLASPQLKPGFDLGIIPGVFLGSFVAAALARELNLEGFSDGRGMRRYLIGAVLMGFGAMLAGGCAVGAGVTGAS VFALTAWIVLGGMWIGAAVTDFVVDRWLFGAKRAQRDTLSSTAAPS
Sequences:
>Translated_366_residues MLTALIDLLGEELVSLLGGLAVGGAFGFFAQRSRFCLRAATIEFARGQGGPRLAVWLLTFASALLGTQALVAMGLLDVSE ARQLAQQGSISGAMIGGTLFGCGMILARGCASRLLVLSANGNLRALLSGLIFAVTAQSAYRGLLAPAREWLTNLWLVDGG PSRDIMSLFGGGTPEKLGFGMLWFVAGLAAVSKFQVGAKVLRSAVAAGAAVVAGWLLTYQLGQASFAPVPLKSLTFSGPS AELLMQVLASPQLKPGFDLGIIPGVFLGSFVAAALARELNLEGFSDGRGMRRYLIGAVLMGFGAMLAGGCAVGAGVTGAS VFALTAWIVLGGMWIGAAVTDFVVDRWLFGAKRAQRDTLSSTAAPS >Mature_366_residues MLTALIDLLGEELVSLLGGLAVGGAFGFFAQRSRFCLRAATIEFARGQGGPRLAVWLLTFASALLGTQALVAMGLLDVSE ARQLAQQGSISGAMIGGTLFGCGMILARGCASRLLVLSANGNLRALLSGLIFAVTAQSAYRGLLAPAREWLTNLWLVDGG PSRDIMSLFGGGTPEKLGFGMLWFVAGLAAVSKFQVGAKVLRSAVAAGAAVVAGWLLTYQLGQASFAPVPLKSLTFSGPS AELLMQVLASPQLKPGFDLGIIPGVFLGSFVAAALARELNLEGFSDGRGMRRYLIGAVLMGFGAMLAGGCAVGAGVTGAS VFALTAWIVLGGMWIGAAVTDFVVDRWLFGAKRAQRDTLSSTAAPS
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=365, Percent_Identity=26.027397260274, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 37668; Mature: 37668
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTALIDLLGEELVSLLGGLAVGGAFGFFAQRSRFCLRAATIEFARGQGGPRLAVWLLTF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ASALLGTQALVAMGLLDVSEARQLAQQGSISGAMIGGTLFGCGMILARGCASRLLVLSAN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECC GNLRALLSGLIFAVTAQSAYRGLLAPAREWLTNLWLVDGGPSRDIMSLFGGGTPEKLGFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCHHHHHHH MLWFVAGLAAVSKFQVGAKVLRSAVAAGAAVVAGWLLTYQLGQASFAPVPLKSLTFSGPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC AELLMQVLASPQLKPGFDLGIIPGVFLGSFVAAALARELNLEGFSDGRGMRRYLIGAVLM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GFGAMLAGGCAVGAGVTGASVFALTAWIVLGGMWIGAAVTDFVVDRWLFGAKRAQRDTLS HHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC STAAPS CCCCCC >Mature Secondary Structure MLTALIDLLGEELVSLLGGLAVGGAFGFFAQRSRFCLRAATIEFARGQGGPRLAVWLLTF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ASALLGTQALVAMGLLDVSEARQLAQQGSISGAMIGGTLFGCGMILARGCASRLLVLSAN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECC GNLRALLSGLIFAVTAQSAYRGLLAPAREWLTNLWLVDGGPSRDIMSLFGGGTPEKLGFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCHHHHHHH MLWFVAGLAAVSKFQVGAKVLRSAVAAGAAVVAGWLLTYQLGQASFAPVPLKSLTFSGPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC AELLMQVLASPQLKPGFDLGIIPGVFLGSFVAAALARELNLEGFSDGRGMRRYLIGAVLM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GFGAMLAGGCAVGAGVTGASVFALTAWIVLGGMWIGAAVTDFVVDRWLFGAKRAQRDTLS HHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC STAAPS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]