| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340166
Identifier: 146340166
GI number: 146340166
Start: 3384030
End: 3384854
Strand: Direct
Name: 146340166
Synonym: BRADO3182
Alternate gene names: NA
Gene position: 3384030-3384854 (Clockwise)
Preceding gene: 146340165
Following gene: 146340167
Centisome position: 45.38
GC content: 64.0
Gene sequence:
>825_bases ATGTCCATTCGCTACGGTTCTCTCGCTGTCCTGGCCACGGCCGCGCTGACCCTTTCGGCGATCGCCGTGTTCGGGCAGGA GGCGGAACGGAAGGGCATTCCGGCGCCTCCCGGCCACGTCTTCAAGACCATCATCTCGGGCTATCAGTTCCGCACCAAGG AGACCCGCGCGCTGCAGGATGATGACCTGGAGAACCCGGGCTTCCTCGCGGTGGAGCGGGCGGCCGATGTCTGGAAGTCG GTCGACGGCAGCGAAGGCAAGTCGTGCATGAGCTGCCACGGCGAGGCGGAAACGACCATGAAGGGCGTCGGCGCTGCCAT GCCCAAATGGAGCGAGAAGCTCAACAAGCCGGTCAATCTCGAGCAGCAGATCAACATCTGCCGCACCGAGCACATGAAGG CGCAGCCCTGGGCGTTCAAGTCCAAGGAGCTGACGGACATGACGACCTTCGTCCGCTTCCAGTCGCGCGGCATGCCGGTG GCTGTCAAGACCGACGGTCCGATGTCGCCCTGGTTCGAGAAGGGTAAGGAGATCTACTACACGCGTGTCGGCCAGCTCGA TCTCGCCTGCGCCTCGTGCCACGAGAAGAACAACGGCAAGTTCATGCGCGCTGATTTCCTCAGCCAGGGCCAGACCAACG GCTTTCCGACCTACCGGCTGCGTGATCAGCGCCTGATCCCGCTGCACGAGCGCTTCGAGGGTTGCATGTTCGATGTCCGC GGCGTGCCCTACAAGCCGCTGTCGGACGAGTTCCTCGCGCTAGAGCTCTACGTCGCCTGGCGCGGCATCGGTCTGCCCGT CGAGACACCGTCGGTCCGCAACTAG
Upstream 100 bases:
>100_bases TTCGCCTGGACGGATGACGACGGCTCGGTGGTGACGGCCGAGGAAAAGATCGCGTTGAAGGCCTGATTGGCAGGCTGCCG ATCGCTACAGGGAGTGACGG
Downstream 100 bases:
>100_bases CGGACACAAGGATAGACATCATGATATCGCGTCGCGAATTCGTTCAGGTCGCATTGGCGGCGGCTGCCTTGTCGGGCGGC ACGTCCCGCGCCTTTGCGCA
Product: putative sulfur oxidation protein (SoxA)/cytochrome c
Products: NA
Alternate protein names: Diheme Cytochrome C; Sulfur Oxidation Protein SoxA; Sulfur Oxidation Protein; Diheme Cytochrome C SoxA; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSIRYGSLAVLATAALTLSAIAVFGQEAERKGIPAPPGHVFKTIISGYQFRTKETRALQDDDLENPGFLAVERAADVWKS VDGSEGKSCMSCHGEAETTMKGVGAAMPKWSEKLNKPVNLEQQINICRTEHMKAQPWAFKSKELTDMTTFVRFQSRGMPV AVKTDGPMSPWFEKGKEIYYTRVGQLDLACASCHEKNNGKFMRADFLSQGQTNGFPTYRLRDQRLIPLHERFEGCMFDVR GVPYKPLSDEFLALELYVAWRGIGLPVETPSVRN
Sequences:
>Translated_274_residues MSIRYGSLAVLATAALTLSAIAVFGQEAERKGIPAPPGHVFKTIISGYQFRTKETRALQDDDLENPGFLAVERAADVWKS VDGSEGKSCMSCHGEAETTMKGVGAAMPKWSEKLNKPVNLEQQINICRTEHMKAQPWAFKSKELTDMTTFVRFQSRGMPV AVKTDGPMSPWFEKGKEIYYTRVGQLDLACASCHEKNNGKFMRADFLSQGQTNGFPTYRLRDQRLIPLHERFEGCMFDVR GVPYKPLSDEFLALELYVAWRGIGLPVETPSVRN >Mature_273_residues SIRYGSLAVLATAALTLSAIAVFGQEAERKGIPAPPGHVFKTIISGYQFRTKETRALQDDDLENPGFLAVERAADVWKSV DGSEGKSCMSCHGEAETTMKGVGAAMPKWSEKLNKPVNLEQQINICRTEHMKAQPWAFKSKELTDMTTFVRFQSRGMPVA VKTDGPMSPWFEKGKEIYYTRVGQLDLACASCHEKNNGKFMRADFLSQGQTNGFPTYRLRDQRLIPLHERFEGCMFDVRG VPYKPLSDEFLALELYVAWRGIGLPVETPSVRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30664; Mature: 30533
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRYGSLAVLATAALTLSAIAVFGQEAERKGIPAPPGHVFKTIISGYQFRTKETRALQD CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEECCCHHHCCCC DDLENPGFLAVERAADVWKSVDGSEGKSCMSCHGEAETTMKGVGAAMPKWSEKLNKPVNL CCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCH EQQINICRTEHMKAQPWAFKSKELTDMTTFVRFQSRGMPVAVKTDGPMSPWFEKGKEIYY HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCEEEE TRVGQLDLACASCHEKNNGKFMRADFLSQGQTNGFPTYRLRDQRLIPLHERFEGCMFDVR EECCCHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCEEECCCCCCCHHHHHCCCEEECC GVPYKPLSDEFLALELYVAWRGIGLPVETPSVRN CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SIRYGSLAVLATAALTLSAIAVFGQEAERKGIPAPPGHVFKTIISGYQFRTKETRALQD CCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCEECCCHHHCCCC DDLENPGFLAVERAADVWKSVDGSEGKSCMSCHGEAETTMKGVGAAMPKWSEKLNKPVNL CCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCH EQQINICRTEHMKAQPWAFKSKELTDMTTFVRFQSRGMPVAVKTDGPMSPWFEKGKEIYY HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCEEEE TRVGQLDLACASCHEKNNGKFMRADFLSQGQTNGFPTYRLRDQRLIPLHERFEGCMFDVR EECCCHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCEEECCCCCCCHHHHHCCCEEECC GVPYKPLSDEFLALELYVAWRGIGLPVETPSVRN CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA