| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340164
Identifier: 146340164
GI number: 146340164
Start: 3383198
End: 3383650
Strand: Direct
Name: 146340164
Synonym: BRADO3180
Alternate gene names: NA
Gene position: 3383198-3383650 (Clockwise)
Preceding gene: 146340163
Following gene: 146340165
Centisome position: 45.37
GC content: 64.9
Gene sequence:
>453_bases ATGGGCGCAATCAACAGACGACAGGCATTCCTTCTCGGCGGCGGTTTCGTCGCCTTGACGGTGCTGCCGATGGCCGCCAA CGCCGAGCCGAGCAACGACGCGGCCGAGATGATCAAGAAGTTCACCGGCGGCAAGGATGCCACGAAGGGCAAGATCACGC TCGATCTGCCCGAGATCGCCGAGAACGGCAACACCGTGCCGCTCGCGCTCTCTGTCGAGAGCCCGATGACGGCTGACAAC TACGTCAAGGAGGTGCTGTTCGTGGCCGACGGCAATCCGAACGCTGGCGTCGCGACGCTGATGTTCACGCCGATGTCCGG CAAGGCCGAGGCCTCGATCCGCATCCGCCTGGCGCAGACCCAGAACGTGATCGCGGTCGCCAAGATGAGCGACGGCTCGC TGTTCACCGAGCGCAAGACCGTCAAGGTCACCATCGGCGGCTGCGGCGGCTGA
Upstream 100 bases:
>100_bases GTCCCGAGTTTGTCGGCAAGCCGGTTCTCACCGCCGCGCAGGTCGAGGATGTCGTGGCCTATCTCGAAACATTGAAATAA CCGCCTCTGGAGGATGATGC
Downstream 100 bases:
>100_bases GACAGGGGAGAGACTGATATGGCAGACAAGCCGCGAATCAAGCTTCCGAAGGAAGCCAAGAAGGGCGAGATCATCCAGAT CAAGACGCTGGTCTCGCATC
Product: sulfur oxidation protein SoxY
Products: NA
Alternate protein names: Sulfur Oxidation Protein; Sulfur Oxidation Y Protein; Twin-Arginine Translocation Pathway Signal; Tat Pathway Signal Sequence Domain Protein; Sulfur Oxidation Protein SoxY; Tat Pathway Signal Sequence Domain-Containing Protein; Sulphur Oxidation Protein SoxZ; Sulfur Oxidation Protein SoxY Domain-Containing Protein
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MGAINRRQAFLLGGGFVALTVLPMAANAEPSNDAAEMIKKFTGGKDATKGKITLDLPEIAENGNTVPLALSVESPMTADN YVKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQTQNVIAVAKMSDGSLFTERKTVKVTIGGCGG
Sequences:
>Translated_150_residues MGAINRRQAFLLGGGFVALTVLPMAANAEPSNDAAEMIKKFTGGKDATKGKITLDLPEIAENGNTVPLALSVESPMTADN YVKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQTQNVIAVAKMSDGSLFTERKTVKVTIGGCGG >Mature_149_residues GAINRRQAFLLGGGFVALTVLPMAANAEPSNDAAEMIKKFTGGKDATKGKITLDLPEIAENGNTVPLALSVESPMTADNY VKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQTQNVIAVAKMSDGSLFTERKTVKVTIGGCGG
Specific function: Unknown
COG id: COG5501
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15573; Mature: 15442
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAINRRQAFLLGGGFVALTVLPMAANAEPSNDAAEMIKKFTGGKDATKGKITLDLPEIA CCCCCCCEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHH ENGNTVPLALSVESPMTADNYVKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQT CCCCEEEEEEEECCCCCHHHHEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECC QNVIAVAKMSDGSLFTERKTVKVTIGGCGG CCEEEEEEECCCCEEECCEEEEEEEECCCC >Mature Secondary Structure GAINRRQAFLLGGGFVALTVLPMAANAEPSNDAAEMIKKFTGGKDATKGKITLDLPEIA CCCCCCEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHH ENGNTVPLALSVESPMTADNYVKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQT CCCCEEEEEEEECCCCCHHHHEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECC QNVIAVAKMSDGSLFTERKTVKVTIGGCGG CCEEEEEEECCCCEEECCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA