| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340141
Identifier: 146340141
GI number: 146340141
Start: 3356337
End: 3357806
Strand: Direct
Name: 146340141
Synonym: BRADO3156
Alternate gene names: NA
Gene position: 3356337-3357806 (Clockwise)
Preceding gene: 146340140
Following gene: 146340142
Centisome position: 45.01
GC content: 67.01
Gene sequence:
>1470_bases ATGGCGATCGCCGCCCAGCCCATGAACCTGCTTTACGCGCTGATCGGCGTGTTTCTCGGCACCGCCGTCGGCGTGCTGCC GGGCATCGGCCCGGCGCTCACCGTCGCGCTGCTGCTGCCGGTCACCTACAAGCTCGATCCCGGCGGCTCGCTGATCATGT TCGCCGGCATCTATTACGGCGGGATGTATGGCGGCTCGACCACCGCGATCTTGATCAACACGCCCGGCGAGAGTGCCTCG ATGGCCACCGCGCTGGAGGGCAACAAGATGGCCAAGGCCGGCCGCGGCGGCCCGGCGCTGGCGACCTCGGCGATCGGCTC GTTCGTCGCTGGCACCATCGCCACCATCGGTCTCGCGTTTCTCTCGCCCTATCTCGTCGACATCGCCGTTCGCTTCGGAC CCGAGGATTACTTCGCGCTGATGTGCGTCGCCTTCGTCACGGTGTCCGCGACGTTCGGCGACTCCCCCATCCGCGGGCTG ATCAGCCTGTTCATCGGGCTGACCCTCGGCCTTGTCGGCATCGACAAGCTCACCGGCCAGGCGCGGCTCGCCTTCGGCGT GCCCGAGTTGCTCGACGGCGTCGAGGTGACGACGCTTGCGGTCGGCCTGTTCGCCGTCGGCGAGGCGCTCTACGTCGCCT CGCGCCGCCATCACAGCGAGGAGAAGATCGAGGCGGTCAAAGGCTCGCTGTGGATGACGCGCGAGGATTGGAAGCGCTCG TGGAAGCCGTGGCTGCGCGGTACTGCGTTCGGCTTCCCGATCGGCGCGCTGCCGGCCGGCGGCGCCGAGATTCCGACCTT CCTGTCCTATTCGACGGAGCGGCGTCTGACCAAATATCCCGACCAGTTCGGCAAGGGCGCGATCGAAGGCGTCGCCGGGC CGGAGGCCGCGAACAACGCCTCCGCCGCGGGTACACTCGTGCCGCTGCTGACCCTGGGACTGCCGACCTCCGCCACCGCG GCGATGATGCTCGCGGGGTTCCAGCAATATGGACTCAATCCGGGCCCGCTGCTGTTCGCTGAACGTCCCGATCTGGTCTG GGGCCTGATCGCGAGCCTGTTTATCGCCAACACGATGCTGCTGGTCTTGAACCTGCCACTTGTCGGCCTGTGGGTGCGGC TGTTGAGAATCCCGACGCCCTGGCTCTATGCCGGCATCCTCGTGTTCGCGACCATGGGCACCATCGCCGCCAAGCCGTCG GTGGTCGAACTGTCGATGCTCGCCGGCTTCGGCGTGCTCGGCTTCCTGATGCGCCGCTTCGATTTTCCGATCGCCCCTGT CGTGGTTGGGCTGATCCTCGGACCGATCGCCGAGAGCCAGCTGCGACGCGCGCTCGCCATCAGCCTCGGCGATCCCATGA CCTTGCTGCAATCTCCGATCTCTGCCACCTTGCTGGTCGTCGCGCTGATCGCGCTGGTCGCGCCGTTCATCCTGAAGGGG CTCGGGCGCTTCAAGGCGAACGAGGATTGA
Upstream 100 bases:
>100_bases TCATCTACGTCGCGTTCGACCGTCTCCTCACTTTGAGCCTTCCCGCCGGTCCGCTCGAAAGACTGCTCTGATGGACACCT TCGCCGCGCTCGCGCATGGG
Downstream 100 bases:
>100_bases GCACGACGCGATCCGCGGTCTGGCGCGGCTGATGTTCGAGCGCAGGCGACGCGATGAGGCTGATATCCGTGGTCATCATG GCGACAGCGCTGTTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MAIAAQPMNLLYALIGVFLGTAVGVLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESAS MATALEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLSPYLVDIAVRFGPEDYFALMCVAFVTVSATFGDSPIRGL ISLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLFAVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRS WKPWLRGTAFGFPIGALPAGGAEIPTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATA AMMLAGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLRIPTPWLYAGILVFATMGTIAAKPS VVELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRALAISLGDPMTLLQSPISATLLVVALIALVAPFILKG LGRFKANED
Sequences:
>Translated_489_residues MAIAAQPMNLLYALIGVFLGTAVGVLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESAS MATALEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLSPYLVDIAVRFGPEDYFALMCVAFVTVSATFGDSPIRGL ISLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLFAVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRS WKPWLRGTAFGFPIGALPAGGAEIPTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATA AMMLAGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLRIPTPWLYAGILVFATMGTIAAKPS VVELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRALAISLGDPMTLLQSPISATLLVVALIALVAPFILKG LGRFKANED >Mature_488_residues AIAAQPMNLLYALIGVFLGTAVGVLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASM ATALEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLSPYLVDIAVRFGPEDYFALMCVAFVTVSATFGDSPIRGLI SLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLFAVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRSW KPWLRGTAFGFPIGALPAGGAEIPTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAA MMLAGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLRIPTPWLYAGILVFATMGTIAAKPSV VELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRALAISLGDPMTLLQSPISATLLVVALIALVAPFILKGL GRFKANED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 51125; Mature: 50994
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAAQPMNLLYALIGVFLGTAVGVLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHHC GMYGGSTTAILINTPGESASMATALEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAF CCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSPYLVDIAVRFGPEDYFALMCVAFVTVSATFGDSPIRGLISLFIGLTLGLVGIDKLTGQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ARLAFGVPELLDGVEVTTLAVGLFAVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRS CEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHH WKPWLRGTAFGFPIGALPAGGAEIPTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNA HHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCC SAAGTLVPLLTLGLPTSATAAMMLAGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTML CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH LVLNLPLVGLWVRLLRIPTPWLYAGILVFATMGTIAAKPSVVELSMLAGFGVLGFLMRRF HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFPIAPVVVGLILGPIAESQLRRALAISLGDPMTLLQSPISATLLVVALIALVAPFILKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH LGRFKANED HHCCCCCCC >Mature Secondary Structure AIAAQPMNLLYALIGVFLGTAVGVLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHHC GMYGGSTTAILINTPGESASMATALEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAF CCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSPYLVDIAVRFGPEDYFALMCVAFVTVSATFGDSPIRGLISLFIGLTLGLVGIDKLTGQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ARLAFGVPELLDGVEVTTLAVGLFAVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRS CEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHHHH WKPWLRGTAFGFPIGALPAGGAEIPTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNA HHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCC SAAGTLVPLLTLGLPTSATAAMMLAGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTML CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH LVLNLPLVGLWVRLLRIPTPWLYAGILVFATMGTIAAKPSVVELSMLAGFGVLGFLMRRF HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFPIAPVVVGLILGPIAESQLRRALAISLGDPMTLLQSPISATLLVVALIALVAPFILKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH LGRFKANED HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]