Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340105
Identifier: 146340105
GI number: 146340105
Start: 3312597
End: 3313715
Strand: Direct
Name: 146340105
Synonym: BRADO3116
Alternate gene names: NA
Gene position: 3312597-3313715 (Clockwise)
Preceding gene: 146340103
Following gene: 146340107
Centisome position: 44.43
GC content: 64.52
Gene sequence:
>1119_bases ATGTCCCACGAGACGCATTCGGATCCTTATCTTCGTTACTATCCAGCCATTGAGCAGCCGCGGCCTGACGAGGCCGAAAT GATCCGCGCCATCGTGGCGTCTGTCGAGCGCACAAGCGCCACTACCTTTGCCACTTACAAACATGGGCTCCGGCAGCAGC ACGCAAAGGGCGTCGGCTATCTGCGCGGCGAGCTCACCGTCTATGAGGACCTTCCGAGTCATCTGCGCCAGGGCTTGTTC GCGCAACCCACGCGCTATCCCGTGATCGTGCGATTCTCGACGGCATTGGGCGCGATCAAGAGCGATCGGATCCGGGTGCC GCGCGGCTTCGCGATCAAGGTGCTGGGCGTGAGCGGCGCCAAGGCACTCGCCGACGACGACACCACCAGCCAGGACCTTC TGCTCGTCAATCATCCGAGCTATATCGCCGACGCGCGCAGCTACTTGGAGGCGCAGCGCAAATTCGAGCGTACCAAAAGT CTCCCCGACCTCGCTGTCCGGGCCGTTGGCCTCGTCTCGCGCGTGCTGCTCGAGCTATCAACACTCGTCCGCCTGCCGTT GCCAATCATCATCAAGGCGCTCGGCGATCCCGGACATCATATTCTTGGCGAGACGTTTCACACCGAGGGCGCGATCCGCT TCGGGGATTTTGTGGCGCGGCTGCGGGCTGTTCCGGTTTCACCCGCGCTTCGTCGTCTCACGGGGCAGCCCAGTCACGAC GGCGACGATGTGGTGCGGCAATCCGTCGTCTCGTTCTTCCGGACGGAGCCTGCCGAGTACGAGCTGCAGGCACAGCTTTG CACCGACCTGCGGCACACCCCGATCGAGGACTCCTCAATCGACTGGCCTGAAGACTTCGCGCCACCGCAGCCGATCGCCA ATATCAGGCTTCCGGCGCAGGTTGCTGACAGTCCCGCCCGCCGCGCCTATGTCGACGACGTGCTCTCGTTCGACCCGTGG CGCTGCCTGGCCGCCCATCAGCCGCTCGGCTCTGTCATGCGGATGCGTCGCGACGTCTATCGAACCTCGCGAGTCCTGCG CCAGCAGCAGAATGCGGCGCTCGGCCTCGCGCCACCCAATCCGACGGAGCCGCGCGACATCGCGGAGCTGCCCGACTGA
Upstream 100 bases:
>100_bases CGATCATCTGCACGGCAGCGAGCTCATTCCGTGCTTGCAGGCGGGCTGTGCACGCTTCTACACTAAATAGCCTCCGCATT GGAGCGGGAGATCCTGTGCC
Downstream 100 bases:
>100_bases GATGTTCAGTCGATCCGGGTCGTGAGCGCAAAGAACGGCGCGGCCCGCAGCGGATCGTCGGGTGCTAGCGAGTGTGCCAG CAGAGCCACCATATCATTTG
Product: putative catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSHETHSDPYLRYYPAIEQPRPDEAEMIRAIVASVERTSATTFATYKHGLRQQHAKGVGYLRGELTVYEDLPSHLRQGLF AQPTRYPVIVRFSTALGAIKSDRIRVPRGFAIKVLGVSGAKALADDDTTSQDLLLVNHPSYIADARSYLEAQRKFERTKS LPDLAVRAVGLVSRVLLELSTLVRLPLPIIIKALGDPGHHILGETFHTEGAIRFGDFVARLRAVPVSPALRRLTGQPSHD GDDVVRQSVVSFFRTEPAEYELQAQLCTDLRHTPIEDSSIDWPEDFAPPQPIANIRLPAQVADSPARRAYVDDVLSFDPW RCLAAHQPLGSVMRMRRDVYRTSRVLRQQQNAALGLAPPNPTEPRDIAELPD
Sequences:
>Translated_372_residues MSHETHSDPYLRYYPAIEQPRPDEAEMIRAIVASVERTSATTFATYKHGLRQQHAKGVGYLRGELTVYEDLPSHLRQGLF AQPTRYPVIVRFSTALGAIKSDRIRVPRGFAIKVLGVSGAKALADDDTTSQDLLLVNHPSYIADARSYLEAQRKFERTKS LPDLAVRAVGLVSRVLLELSTLVRLPLPIIIKALGDPGHHILGETFHTEGAIRFGDFVARLRAVPVSPALRRLTGQPSHD GDDVVRQSVVSFFRTEPAEYELQAQLCTDLRHTPIEDSSIDWPEDFAPPQPIANIRLPAQVADSPARRAYVDDVLSFDPW RCLAAHQPLGSVMRMRRDVYRTSRVLRQQQNAALGLAPPNPTEPRDIAELPD >Mature_371_residues SHETHSDPYLRYYPAIEQPRPDEAEMIRAIVASVERTSATTFATYKHGLRQQHAKGVGYLRGELTVYEDLPSHLRQGLFA QPTRYPVIVRFSTALGAIKSDRIRVPRGFAIKVLGVSGAKALADDDTTSQDLLLVNHPSYIADARSYLEAQRKFERTKSL PDLAVRAVGLVSRVLLELSTLVRLPLPIIIKALGDPGHHILGETFHTEGAIRFGDFVARLRAVPVSPALRRLTGQPSHDG DDVVRQSVVSFFRTEPAEYELQAQLCTDLRHTPIEDSSIDWPEDFAPPQPIANIRLPAQVADSPARRAYVDDVLSFDPWR CLAAHQPLGSVMRMRRDVYRTSRVLRQQQNAALGLAPPNPTEPRDIAELPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020835 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase [H]
EC number: NA
Molecular weight: Translated: 41510; Mature: 41379
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHETHSDPYLRYYPAIEQPRPDEAEMIRAIVASVERTSATTFATYKHGLRQQHAKGVGY CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE LRGELTVYEDLPSHLRQGLFAQPTRYPVIVRFSTALGAIKSDRIRVPRGFAIKVLGVSGA EECCEEHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCEECCCCCEEEEEECCCC KALADDDTTSQDLLLVNHPSYIADARSYLEAQRKFERTKSLPDLAVRAVGLVSRVLLELS CHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TLVRLPLPIIIKALGDPGHHILGETFHTEGAIRFGDFVARLRAVPVSPALRRLTGQPSHD HHHHCCHHHHHHHCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC GDDVVRQSVVSFFRTEPAEYELQAQLCTDLRHTPIEDSSIDWPEDFAPPQPIANIRLPAQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCHH VADSPARRAYVDDVLSFDPWRCLAAHQPLGSVMRMRRDVYRTSRVLRQQQNAALGLAPPN HCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC PTEPRDIAELPD CCCCCCCCCCCC >Mature Secondary Structure SHETHSDPYLRYYPAIEQPRPDEAEMIRAIVASVERTSATTFATYKHGLRQQHAKGVGY CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCE LRGELTVYEDLPSHLRQGLFAQPTRYPVIVRFSTALGAIKSDRIRVPRGFAIKVLGVSGA EECCEEHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCEECCCCCEEEEEECCCC KALADDDTTSQDLLLVNHPSYIADARSYLEAQRKFERTKSLPDLAVRAVGLVSRVLLELS CHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TLVRLPLPIIIKALGDPGHHILGETFHTEGAIRFGDFVARLRAVPVSPALRRLTGQPSHD HHHHCCHHHHHHHCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC GDDVVRQSVVSFFRTEPAEYELQAQLCTDLRHTPIEDSSIDWPEDFAPPQPIANIRLPAQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCHH VADSPARRAYVDDVLSFDPWRCLAAHQPLGSVMRMRRDVYRTSRVLRQQQNAALGLAPPN HCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC PTEPRDIAELPD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]