| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fabG [H]
Identifier: 146340035
GI number: 146340035
Start: 3242095
End: 3242862
Strand: Direct
Name: fabG [H]
Synonym: BRADO3043
Alternate gene names: 146340035
Gene position: 3242095-3242862 (Clockwise)
Preceding gene: 146340034
Following gene: 146340038
Centisome position: 43.48
GC content: 64.45
Gene sequence:
>768_bases ATGACCCTGTTCGACATGACCGGCAAGGTGGCCGTCATCACCGGCTCCACCCGCGGCATCGGGCTCGCCATTGCCGAGCG CATGGCCGAGCACGGCGCCAAGGTGGTGATCTCCTCGCGCAAGGCCGATGTCTGCGATGCCGTGGCGAAGAAGATCAACG ACCGTCACGGCGCGGGTACGGCGGCCGCGGTCGCCGCCAACATCTCCAGCAAGGAGAACCTGCAGAACCTCGTCGACGAG GCCAACCGCATCTACGGCAAGATCGACGTCCTGGTCTGCAACGCCGCCTCCAATCCCTATTACGGGCCGCTGGCCGGCAT CTCCGACGATCAGTTCCGGAAAATCCTCGACAACAACATCGTCGCCAACAACTGGCTGATCAGCATGGTCGTGCCGCAAA TGATCGCGCGCAAGGACGGCTCTGTGATCATCGTCTCCTCGATCGGCGGCCTGAAGGGCTCGACCATCCTCGGCGCCTAC GCGATCTCCAAGGCGGCCGACATGCAGCTCGCGCGCAATCTCGCCTGCGAATACGGCCCGCACAATGTGCGCGTGAACTG TATCGCGCCCGGCCTGATCAAGACCGACTTCGCCAAGGCACTGTGGGACAATCCGGAGAACCTGAAGGCCTCGACCGCCC GCTCGCCGCTGCTGCGCATCGGCATCCCCGACGAAATCGCGGGGGCCGCGGTGTTCCTGGGATCTGCCGCCGGCAACTTC ATGACCGGCCAGACCATGGTGATCGACGGCGGCGCGACGATTAGTTGA
Upstream 100 bases:
>100_bases CACAAGAGGAGAGGGCACATCAACTGGCACCGTAGAGGAGCAATGCCGACCGTGCGGTGCGCGTTGAACTAACAAAACCT ATAACCAGGAGGAACTCCCC
Downstream 100 bases:
>100_bases TCGACCGCTTTCCTCGTAACCCGCGGTGCAGCCACACCCACAATTGTCGTCCCGGCGAACGCCGGGACCCATAACCACCG GCCGGTGTGAGGCAGGCAAC
Product: putative short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTLFDMTGKVAVITGSTRGIGLAIAERMAEHGAKVVISSRKADVCDAVAKKINDRHGAGTAAAVAANISSKENLQNLVDE ANRIYGKIDVLVCNAASNPYYGPLAGISDDQFRKILDNNIVANNWLISMVVPQMIARKDGSVIIVSSIGGLKGSTILGAY AISKAADMQLARNLACEYGPHNVRVNCIAPGLIKTDFAKALWDNPENLKASTARSPLLRIGIPDEIAGAAVFLGSAAGNF MTGQTMVIDGGATIS
Sequences:
>Translated_255_residues MTLFDMTGKVAVITGSTRGIGLAIAERMAEHGAKVVISSRKADVCDAVAKKINDRHGAGTAAAVAANISSKENLQNLVDE ANRIYGKIDVLVCNAASNPYYGPLAGISDDQFRKILDNNIVANNWLISMVVPQMIARKDGSVIIVSSIGGLKGSTILGAY AISKAADMQLARNLACEYGPHNVRVNCIAPGLIKTDFAKALWDNPENLKASTARSPLLRIGIPDEIAGAAVFLGSAAGNF MTGQTMVIDGGATIS >Mature_254_residues TLFDMTGKVAVITGSTRGIGLAIAERMAEHGAKVVISSRKADVCDAVAKKINDRHGAGTAAAVAANISSKENLQNLVDEA NRIYGKIDVLVCNAASNPYYGPLAGISDDQFRKILDNNIVANNWLISMVVPQMIARKDGSVIIVSSIGGLKGSTILGAYA ISKAADMQLARNLACEYGPHNVRVNCIAPGLIKTDFAKALWDNPENLKASTARSPLLRIGIPDEIAGAAVFLGSAAGNFM TGQTMVIDGGATIS
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=39.9209486166008, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=39.3574297188755, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=42.6395939086294, Blast_Score=144, Evalue=8e-35, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=33.59375, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=40.5263157894737, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=30.7392996108949, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=32.1285140562249, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=31.3008130081301, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=30.3964757709251, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4503301, Length=251, Percent_Identity=29.8804780876494, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI302344755, Length=108, Percent_Identity=42.5925925925926, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=26.984126984127, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI226371731, Length=194, Percent_Identity=30.9278350515464, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI223718074, Length=215, Percent_Identity=29.7674418604651, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=26.3779527559055, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI7705855, Length=204, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=28.3464566929134, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI210032110, Length=205, Percent_Identity=25.8536585365854, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=26.7716535433071, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI32455239, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI5031765, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=26.4248704663212, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI7657478, Length=201, Percent_Identity=29.3532338308458, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI209862901, Length=206, Percent_Identity=27.6699029126214, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI19923983, Length=206, Percent_Identity=27.6699029126214, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI157739938, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI142976729, Length=227, Percent_Identity=26.431718061674, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=23.9669421487603, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4503817, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=33.0708661417323, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=34.2412451361868, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=36.144578313253, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=30.6451612903226, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.1960784313725, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=30.327868852459, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=27.2373540856031, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=31.3253012048193, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=28.957528957529, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786701, Length=201, Percent_Identity=29.8507462686567, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787526, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=36, Blast_Score=160, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=34.9397590361446, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=33.4586466165414, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.5985130111524, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17562906, Length=278, Percent_Identity=29.8561151079137, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=30.7984790874525, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=31.1787072243346, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=30.7407407407407, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=31.7269076305221, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=33.4586466165414, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=29.6, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.9433962264151, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=31.5589353612167, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=30.3846153846154, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115534694, Length=258, Percent_Identity=29.8449612403101, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=28.996282527881, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=25.6, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=28.8389513108614, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=31.203007518797, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=30.7086614173228, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=29.1044776119403, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562908, Length=276, Percent_Identity=27.8985507246377, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=31.9548872180451, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=28.740157480315, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=28.4, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=28.5198555956679, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71997099, Length=227, Percent_Identity=29.9559471365639, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17555612, Length=226, Percent_Identity=28.7610619469027, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=28.4090909090909, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567345, Length=201, Percent_Identity=27.8606965174129, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25152911, Length=194, Percent_Identity=26.8041237113402, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=29.9610894941634, Blast_Score=101, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=28, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319635, Length=260, Percent_Identity=25.3846153846154, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=248, Percent_Identity=22.9838709677419, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6322226, Length=209, Percent_Identity=28.7081339712919, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=30.6122448979592, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=39.0625, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=33.6032388663968, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=31.7460317460317, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=32.3886639676113, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=30.952380952381, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI24644337, Length=260, Percent_Identity=32.6923076923077, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=27.9527559055118, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24640492, Length=240, Percent_Identity=28.3333333333333, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640442, Length=230, Percent_Identity=29.1304347826087, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=27.1653543307087, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=28.7179487179487, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=28.7179487179487, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574402, Length=197, Percent_Identity=28.4263959390863, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24584744, Length=197, Percent_Identity=28.4263959390863, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI281364892, Length=202, Percent_Identity=28.7128712871287, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17737361, Length=231, Percent_Identity=25.5411255411255, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648944, Length=236, Percent_Identity=25, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26657; Mature: 26526
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFDMTGKVAVITGSTRGIGLAIAERMAEHGAKVVISSRKADVCDAVAKKINDRHGAGT CEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCH AAAVAANISSKENLQNLVDEANRIYGKIDVLVCNAASNPYYGPLAGISDDQFRKILDNNI HHHHEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCE VANNWLISMVVPQMIARKDGSVIIVSSIGGLKGSTILGAYAISKAADMQLARNLACEYGP EECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC HNVRVNCIAPGLIKTDFAKALWDNPENLKASTARSPLLRIGIPDEIAGAAVFLGSAAGNF CEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHCCCCEEEECCCHHHCCHHEEEECCCCCE MTGQTMVIDGGATIS ECCCEEEEECCCCCC >Mature Secondary Structure TLFDMTGKVAVITGSTRGIGLAIAERMAEHGAKVVISSRKADVCDAVAKKINDRHGAGT EEECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCH AAAVAANISSKENLQNLVDEANRIYGKIDVLVCNAASNPYYGPLAGISDDQFRKILDNNI HHHHEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCE VANNWLISMVVPQMIARKDGSVIIVSSIGGLKGSTILGAYAISKAADMQLARNLACEYGP EECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC HNVRVNCIAPGLIKTDFAKALWDNPENLKASTARSPLLRIGIPDEIAGAAVFLGSAAGNF CEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHCCCCEEEECCCHHHCCHHEEEECCCCCE MTGQTMVIDGGATIS ECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]