Click here to switch to the map view.

The map label for this gene is glgB [H]

Identifier: 146340019

GI number: 146340019

Start: 3223598

End: 3225559

Strand: Direct

Name: glgB [H]

Synonym: BRADO3025

Alternate gene names: 146340019

Gene position: 3223598-3225559 (Clockwise)

Preceding gene: 146340018

Following gene: 146340022

Centisome position: 43.23

GC content: 65.65

Gene sequence:

>1962_bases
GTGGATATGCTGCTGGAACCTGTTACGCTGCCGCCATTCCCCGAAGGCATCCGAATTTCCTTGAGGCAGATGCATCTTCT
CCAGGCTCCCATGGGCGGCACCCTGGTGACCGGCGGCGCCACCTTCCGCGTGTTCGCACCGCATGCCAAGGCGATCTACG
TCTCCGGCCCGTTCAACGATTGGGCGCAGGACGCGAACTGCCGTCTCGCGCCGATCGGCAACGGCCATTGGGCGATCTTC
GTGCCCGGCTTGAAGGACGGCGACGCCTACATGTATTTCGTCGAGGGCGAGGGCAATGCGGGCTACAAGCGTGATCCGCA
TGCGCGGCTGCTCACCGTCGAGCCGCCGTTCCCGCAGGCGCATTCGGTGCTGCGCAACCCGCAAGCCTTTCCCTGGCACG
ACACGGATTTCACGCCGCCGCCCAGCAACGAGCTGGTGATCTATCAGCTTCATGTCGGCGTCTTCGACATGAAAGCCGGC
AATCCCGATGGCTGCTTCTTCGACGTGATCGAGCGCGTGCCGCATCTGAAGAGGCTCGGTATCAATGCCATCGAGTTGCT
GCCTGTGCAGGAATTCCCGACCATGTTCAGCATGGGCTACAACGGCACCGACCTGTTCAGCCCGGAGACCGAGTATGGCG
AGCACGAAGCGGGGCATCTCGCCGCCTATTTCGCCCGGACCAACGAGATTCTCACGGCCGCGGGCGCAGCAGCTTACGCC
GATATCGGCGTCGTCAGGCATTGCGACGACCAGCTGCGCGCGCTGATCGACGTCTGCCATGTCCATGGCATCGCCGTTCT
GTTCGACGTCGTCTACAACCACGCTGGCGGCGGGTTCGATGAGAACAGCATCTGGTTCTTCGACCGTCAGGCCTATGGCG
ATCCCAACCGCAGCCTGTATTTCACCGATCAGGGCTGGGCCGGCGGCCAGGTGTTTGCCTATTGGAATGCCGACGTGCGG
CAGTACCTCGTCGACAACGCTATCATGCTCTATCGCGAGTATCACGCCGACGGGTTGCGCTTCGACGAGGTCAGCGTGAT
GGACCGCTTCGGCGGCTGGGCGACCTGCCAGCAGCTCACCGAGGCGCTGCGCGCGGAGAAACCGGACGCGATCCAGATCG
CGGAGTACTGGCCGGTCAATCCGTGGATCGTGAAGGACATCGCCGCCGGCGGCGCCGGATTCGACGCGACGTGGAGCGAT
GGACTGCGGCTCGCGGTGCGGGGCGCGATTGCCAGCGCAGCAGGCGGAGCAGGGGCTCAAGTCGCCATGCAGCCGATCGC
CGCCGCGCTCGCCGATCTCGGCCTGGGCGAGCGCTGGCGCGCCGTCAACTCGATCGAGAACCACGACATCGTCTATGCCG
GCCGCGAGCCGCGCATCTCGCGTCTGGCCGATCCCGTCGACAGCCGCTGCTGGTACGCGCGCAGCCGCTGCCGTGTCGCC
ACCGGCCTGTTGCTGACCGCGCCGGGCATCCCGATGCTGTTCATGGGCCAGGAGCTGTTCGAGGACCGTCCCTGGAGCGA
CACGCCGAGCCCGGACACCACCATCCAATGGGCGCTGCTCGACGGCGAGGACAAGATCACGGCGGATGCGATCCGCTTCA
CGTCGGAGCTGATCGCTGTCCGCCGCACCCATCCGGCGCTGACCGCCGAGGGCTGCGCCATCGTCCACGTCCACGACGGC
AATCGCGTGCTCGCCTTCCACCGCTGGGACGGAAAGGGCGACGACGTCATGGTGATCGTCAGTTTGAGCGAGACGCCGTG
GCGCGACTACGCGATCGGCTTCCCGGCAGGCGGCACTTGGCACGAGGTGTTCAACAGCGACGTCTACGACAATTGGGTCA
ATCCGGGCGTGGTCGGCAACAACGGCGCGGTGACCGCGAACGGCCCCGCGCTGCACGGCCAGCCGAGCTCGGCCATGGTG
ACGATCCCTGCCAACGGCGTGCTGGTGTTTGCCAGGACATGA

Upstream 100 bases:

>100_bases
GACGCTCGGCTTTCCGGACGAGGCCGGGAACGTCGTGCTGTTCAAGCCCGACAAGGCCGTGCCGAACGGCGCGCGGCTGT
TCTGAGCGGGGGGCGAGACC

Downstream 100 bases:

>100_bases
GGTGTGTAGGGTGGGCAAAGGCGCTGCACTGCTCTCTCGACAAACGCGATCGCAGAGGCGCCGTGCCCACCATCTTGCCG
GCGTGCTCGCGGATCCACGG

Product: putative 1,4-alpha-glucan branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MDMLLEPVTLPPFPEGIRISLRQMHLLQAPMGGTLVTGGATFRVFAPHAKAIYVSGPFNDWAQDANCRLAPIGNGHWAIF
VPGLKDGDAYMYFVEGEGNAGYKRDPHARLLTVEPPFPQAHSVLRNPQAFPWHDTDFTPPPSNELVIYQLHVGVFDMKAG
NPDGCFFDVIERVPHLKRLGINAIELLPVQEFPTMFSMGYNGTDLFSPETEYGEHEAGHLAAYFARTNEILTAAGAAAYA
DIGVVRHCDDQLRALIDVCHVHGIAVLFDVVYNHAGGGFDENSIWFFDRQAYGDPNRSLYFTDQGWAGGQVFAYWNADVR
QYLVDNAIMLYREYHADGLRFDEVSVMDRFGGWATCQQLTEALRAEKPDAIQIAEYWPVNPWIVKDIAAGGAGFDATWSD
GLRLAVRGAIASAAGGAGAQVAMQPIAAALADLGLGERWRAVNSIENHDIVYAGREPRISRLADPVDSRCWYARSRCRVA
TGLLLTAPGIPMLFMGQELFEDRPWSDTPSPDTTIQWALLDGEDKITADAIRFTSELIAVRRTHPALTAEGCAIVHVHDG
NRVLAFHRWDGKGDDVMVIVSLSETPWRDYAIGFPAGGTWHEVFNSDVYDNWVNPGVVGNNGAVTANGPALHGQPSSAMV
TIPANGVLVFART

Sequences:

>Translated_653_residues
MDMLLEPVTLPPFPEGIRISLRQMHLLQAPMGGTLVTGGATFRVFAPHAKAIYVSGPFNDWAQDANCRLAPIGNGHWAIF
VPGLKDGDAYMYFVEGEGNAGYKRDPHARLLTVEPPFPQAHSVLRNPQAFPWHDTDFTPPPSNELVIYQLHVGVFDMKAG
NPDGCFFDVIERVPHLKRLGINAIELLPVQEFPTMFSMGYNGTDLFSPETEYGEHEAGHLAAYFARTNEILTAAGAAAYA
DIGVVRHCDDQLRALIDVCHVHGIAVLFDVVYNHAGGGFDENSIWFFDRQAYGDPNRSLYFTDQGWAGGQVFAYWNADVR
QYLVDNAIMLYREYHADGLRFDEVSVMDRFGGWATCQQLTEALRAEKPDAIQIAEYWPVNPWIVKDIAAGGAGFDATWSD
GLRLAVRGAIASAAGGAGAQVAMQPIAAALADLGLGERWRAVNSIENHDIVYAGREPRISRLADPVDSRCWYARSRCRVA
TGLLLTAPGIPMLFMGQELFEDRPWSDTPSPDTTIQWALLDGEDKITADAIRFTSELIAVRRTHPALTAEGCAIVHVHDG
NRVLAFHRWDGKGDDVMVIVSLSETPWRDYAIGFPAGGTWHEVFNSDVYDNWVNPGVVGNNGAVTANGPALHGQPSSAMV
TIPANGVLVFART
>Mature_653_residues
MDMLLEPVTLPPFPEGIRISLRQMHLLQAPMGGTLVTGGATFRVFAPHAKAIYVSGPFNDWAQDANCRLAPIGNGHWAIF
VPGLKDGDAYMYFVEGEGNAGYKRDPHARLLTVEPPFPQAHSVLRNPQAFPWHDTDFTPPPSNELVIYQLHVGVFDMKAG
NPDGCFFDVIERVPHLKRLGINAIELLPVQEFPTMFSMGYNGTDLFSPETEYGEHEAGHLAAYFARTNEILTAAGAAAYA
DIGVVRHCDDQLRALIDVCHVHGIAVLFDVVYNHAGGGFDENSIWFFDRQAYGDPNRSLYFTDQGWAGGQVFAYWNADVR
QYLVDNAIMLYREYHADGLRFDEVSVMDRFGGWATCQQLTEALRAEKPDAIQIAEYWPVNPWIVKDIAAGGAGFDATWSD
GLRLAVRGAIASAAGGAGAQVAMQPIAAALADLGLGERWRAVNSIENHDIVYAGREPRISRLADPVDSRCWYARSRCRVA
TGLLLTAPGIPMLFMGQELFEDRPWSDTPSPDTTIQWALLDGEDKITADAIRFTSELIAVRRTHPALTAEGCAIVHVHDG
NRVLAFHRWDGKGDDVMVIVSLSETPWRDYAIGFPAGGTWHEVFNSDVYDNWVNPGVVGNNGAVTANGPALHGQPSSAMV
TIPANGVLVFART

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=675, Percent_Identity=22.6666666666667, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI1789839, Length=662, Percent_Identity=24.6223564954683, Blast_Score=144, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28573410, Length=687, Percent_Identity=23.1441048034935, Blast_Score=94, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 71649; Mature: 71649

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMLLEPVTLPPFPEGIRISLRQMHLLQAPMGGTLVTGGATFRVFAPHAKAIYVSGPFND
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCCH
WAQDANCRLAPIGNGHWAIFVPGLKDGDAYMYFVEGEGNAGYKRDPHARLLTVEPPFPQA
HHCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHH
HSVLRNPQAFPWHDTDFTPPPSNELVIYQLHVGVFDMKAGNPDGCFFDVIERVPHLKRLG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHCC
INAIELLPVQEFPTMFSMGYNGTDLFSPETEYGEHEAGHLAAYFARTNEILTAAGAAAYA
CCEEEEEECHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCHHEECCCCHHHH
DIGVVRHCDDQLRALIDVCHVHGIAVLFDVVYNHAGGGFDENSIWFFDRQAYGDPNRSLY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEE
FTDQGWAGGQVFAYWNADVRQYLVDNAIMLYREYHADGLRFDEVSVMDRFGGWATCQQLT
EECCCCCCCEEEEEECHHHHHHHHHHHEEEEEECCCCCCEECHHHHHHHCCCHHHHHHHH
EALRAEKPDAIQIAEYWPVNPWIVKDIAAGGAGFDATWSDGLRLAVRGAIASAAGGAGAQ
HHHHCCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCHH
VAMQPIAAALADLGLGERWRAVNSIENHDIVYAGREPRISRLADPVDSRCWYARSRCRVA
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHEEE
TGLLLTAPGIPMLFMGQELFEDRPWSDTPSPDTTIQWALLDGEDKITADAIRFTSELIAV
ECEEEECCCCCEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
RRTHPALTAEGCAIVHVHDGNRVLAFHRWDGKGDDVMVIVSLSETPWRDYAIGFPAGGTW
HCCCCCEEECCEEEEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCH
HEVFNSDVYDNWVNPGVVGNNGAVTANGPALHGQPSSAMVTIPANGVLVFART
HHHHCCCHHHCCCCCCEECCCCEEEECCCEECCCCCCCEEEECCCCEEEEEEC
>Mature Secondary Structure
MDMLLEPVTLPPFPEGIRISLRQMHLLQAPMGGTLVTGGATFRVFAPHAKAIYVSGPFND
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCCH
WAQDANCRLAPIGNGHWAIFVPGLKDGDAYMYFVEGEGNAGYKRDPHARLLTVEPPFPQA
HHCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCHH
HSVLRNPQAFPWHDTDFTPPPSNELVIYQLHVGVFDMKAGNPDGCFFDVIERVPHLKRLG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHCC
INAIELLPVQEFPTMFSMGYNGTDLFSPETEYGEHEAGHLAAYFARTNEILTAAGAAAYA
CCEEEEEECHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCHHEECCCCHHHH
DIGVVRHCDDQLRALIDVCHVHGIAVLFDVVYNHAGGGFDENSIWFFDRQAYGDPNRSLY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEE
FTDQGWAGGQVFAYWNADVRQYLVDNAIMLYREYHADGLRFDEVSVMDRFGGWATCQQLT
EECCCCCCCEEEEEECHHHHHHHHHHHEEEEEECCCCCCEECHHHHHHHCCCHHHHHHHH
EALRAEKPDAIQIAEYWPVNPWIVKDIAAGGAGFDATWSDGLRLAVRGAIASAAGGAGAQ
HHHHCCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCHH
VAMQPIAAALADLGLGERWRAVNSIENHDIVYAGREPRISRLADPVDSRCWYARSRCRVA
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHEEE
TGLLLTAPGIPMLFMGQELFEDRPWSDTPSPDTTIQWALLDGEDKITADAIRFTSELIAV
ECEEEECCCCCEEECCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
RRTHPALTAEGCAIVHVHDGNRVLAFHRWDGKGDDVMVIVSLSETPWRDYAIGFPAGGTW
HCCCCCEEECCEEEEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCH
HEVFNSDVYDNWVNPGVVGNNGAVTANGPALHGQPSSAMVTIPANGVLVFART
HHHHCCCHHHCCCCCCEECCCCEEEECCCEECCCCCCCEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA