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The map label for this gene is yliD [C]

Identifier: 146340015

GI number: 146340015

Start: 3219627

End: 3220544

Strand: Direct

Name: yliD [C]

Synonym: BRADO3021

Alternate gene names: 146340015

Gene position: 3219627-3220544 (Clockwise)

Preceding gene: 146340014

Following gene: 146340016

Centisome position: 43.18

GC content: 69.39

Gene sequence:

>918_bases
TTGACCGTCACGACCACAACGTCTCCGCCACCCGGCCTCGTCGTCGCGCCCCGTCTGCCGGACCTGATGGCGGCGCCGAA
GGTCCGGCGAGGCATCATCGGCTTCCTGCGCAACCATCCGACGGTCGCGATCGGCGGCGCGCTCTTGCTCGTGCTCGTCA
TCATCGGCGTGTTCGCGCCGTTCCTGTTCACCGTCGATCCCACCGCGATCGCGCCGGCCAAGCGCACGCGGCTGCCGTCG
GCCGACTTCTGGTTCGGCACGGATGCGCTCGGCCGCGACATCTATTCGCGCGTGCTCTACGGCACCCGCGTCTCGCTCAC
GGTCGGCCTCTCGGTGGCGCTCGCAGCCTCGCTCATCGGGCTTTCGATCGGCCTCGTCGCCGGCTTCGTGCGCTGGGCCG
ACGGCGTGCTGATGCGCTGCATGGACGGGCTGATGTCGATCCCGCCGATCCTGCTCGCGGTCGCGCTGATGGCGCTGACG
CGCGGCAGCGTCGGCAACGTCATCCTCGCCATCACCATCGCCGAGATCCCGCGCGTCGCGCGCCTCATCCGCGGCGTCGT
GCTGTCCTTGCGCGAGCAGCCTTATGTCGACGGCGCGGTCGCCTCGGGCACGCGCACGCCGATGGTGATCCTGCGCCACA
TCCTACCCAACACCATGGCGCCGATGCTGGTGCAGGCGACCTACATCTGCGCCAGCGCTATGATCACCGAGGCGATCCTG
TCCTTCATCGGCGCCGGCACGCCGCCGACCATCCCGTCCTGGGGCAACATCATGGCCGAGGGCCGCGCGCTCTGGCAGGT
CAAGCCCTACATCGTGTTCTTCCCGGCGGCGTTCCTGTCGGTGACGGTGCTCGCCGTGAATCTGGTGGGTGACGGACTCC
GCGACGCGCTCGACCCGCGCATGGCGAAGTCGCCATGA

Upstream 100 bases:

>100_bases
CTGTCATTCAGGGCATCGTGCTGCTGTTCAGCTTCGTCTACGTGCTTGTCAATCTCCTGATCGACATCACCTACACCCTG
GTCGACCCGAGGATCCGCTA

Downstream 100 bases:

>100_bases
GCCGCAGCGTGAGACATCGCCAGGAGCTGAACTGATGCCTTTGCTCGAGGTCGAGAATCTCCAGGTCCATTTCCGCACGC
CCACCGGCATCAACCGGGCC

Product: putative oligopeptide/dipeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTVTTTTSPPPGLVVAPRLPDLMAAPKVRRGIIGFLRNHPTVAIGGALLLVLVIIGVFAPFLFTVDPTAIAPAKRTRLPS
ADFWFGTDALGRDIYSRVLYGTRVSLTVGLSVALAASLIGLSIGLVAGFVRWADGVLMRCMDGLMSIPPILLAVALMALT
RGSVGNVILAITIAEIPRVARLIRGVVLSLREQPYVDGAVASGTRTPMVILRHILPNTMAPMLVQATYICASAMITEAIL
SFIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPAAFLSVTVLAVNLVGDGLRDALDPRMAKSP

Sequences:

>Translated_305_residues
MTVTTTTSPPPGLVVAPRLPDLMAAPKVRRGIIGFLRNHPTVAIGGALLLVLVIIGVFAPFLFTVDPTAIAPAKRTRLPS
ADFWFGTDALGRDIYSRVLYGTRVSLTVGLSVALAASLIGLSIGLVAGFVRWADGVLMRCMDGLMSIPPILLAVALMALT
RGSVGNVILAITIAEIPRVARLIRGVVLSLREQPYVDGAVASGTRTPMVILRHILPNTMAPMLVQATYICASAMITEAIL
SFIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPAAFLSVTVLAVNLVGDGLRDALDPRMAKSP
>Mature_304_residues
TVTTTTSPPPGLVVAPRLPDLMAAPKVRRGIIGFLRNHPTVAIGGALLLVLVIIGVFAPFLFTVDPTAIAPAKRTRLPSA
DFWFGTDALGRDIYSRVLYGTRVSLTVGLSVALAASLIGLSIGLVAGFVRWADGVLMRCMDGLMSIPPILLAVALMALTR
GSVGNVILAITIAEIPRVARLIRGVVLSLREQPYVDGAVASGTRTPMVILRHILPNTMAPMLVQATYICASAMITEAILS
FIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPAAFLSVTVLAVNLVGDGLRDALDPRMAKSP

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=270, Percent_Identity=40.3703703703704, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1787760, Length=270, Percent_Identity=38.1481481481481, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=35.6617647058824, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=35.8333333333333, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=35.6589147286822, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1787549, Length=259, Percent_Identity=33.2046332046332, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=31.1688311688312, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32243; Mature: 32112

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTTTTSPPPGLVVAPRLPDLMAAPKVRRGIIGFLRNHPTVAIGGALLLVLVIIGVFAP
CEECCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
FLFTVDPTAIAPAKRTRLPSADFWFGTDALGRDIYSRVLYGTRVSLTVGLSVALAASLIG
HHEECCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LSIGLVAGFVRWADGVLMRCMDGLMSIPPILLAVALMALTRGSVGNVILAITIAEIPRVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
RLIRGVVLSLREQPYVDGAVASGTRTPMVILRHILPNTMAPMLVQATYICASAMITEAIL
HHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SFIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPAAFLSVTVLAVNLVGDGLRDALDPR
HHHCCCCCCCCCCCHHHHHCCCEEEEECCHHEEHHHHHHHHHHHHHHHHCCHHHHHCCCC
MAKSP
CCCCC
>Mature Secondary Structure 
TVTTTTSPPPGLVVAPRLPDLMAAPKVRRGIIGFLRNHPTVAIGGALLLVLVIIGVFAP
EECCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
FLFTVDPTAIAPAKRTRLPSADFWFGTDALGRDIYSRVLYGTRVSLTVGLSVALAASLIG
HHEECCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LSIGLVAGFVRWADGVLMRCMDGLMSIPPILLAVALMALTRGSVGNVILAITIAEIPRVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
RLIRGVVLSLREQPYVDGAVASGTRTPMVILRHILPNTMAPMLVQATYICASAMITEAIL
HHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SFIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPAAFLSVTVLAVNLVGDGLRDALDPR
HHHCCCCCCCCCCCHHHHHCCCEEEEECCHHEEHHHHHHHHHHHHHHHHCCHHHHHCCCC
MAKSP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]