| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340006
Identifier: 146340006
GI number: 146340006
Start: 3210415
End: 3211017
Strand: Direct
Name: 146340006
Synonym: BRADO3012
Alternate gene names: NA
Gene position: 3210415-3211017 (Clockwise)
Preceding gene: 146340005
Following gene: 146340007
Centisome position: 43.05
GC content: 62.69
Gene sequence:
>603_bases ATGCCCGAGCTCCAATCCGACCTGTTCGAGATGCGCCGCCTGGAGTCGCTGTCCAACACCATCTTCGGTGTGGCGATGAC GCTTCTCGCCTATGACTTGCCGAAACCGAACTTCGCCCAGATGCCGGATTGGAGTGACCTCGTGCACACCTATTCCGGCC GGCTCGCCGGACTGGTGCTGAGCTTCATCATCGCCGGCGTGTTCTGGATCAGCCACCACCGCCGGCTGGCCCGGCAGCCC TATGGCAGCCGCTTCGTCGTGATCCTCAACCTGTTTTTTCTGCTGTCGATCGTGCTGCTGCCGGTCACCAACGGGCTCTA CAGCAGCTATCGGCTGTCGAGCGCGGTAGCAGTGATGTACGGCGTGCATCTCACCATCATTGCCGCGCTGAACGCCGCAC TCTGGTGGCTCAGCCTTCCGTCAGGTCGTCATGCCGAGATCGCCGGCGCGGTCTTCCCGGTCATCGTGTTCGTTCCGGGG ATTGTGATGGCCGCGTACGCGCCCGAATACGTGCAGTATTTCTGGATGCTCGGCTTCGGCGGGTTTCTTGCGCGTCGCTT CGTTGCCACCAAGCCGGAGACAGCGGCGGGCGAGAGCGGATGA
Upstream 100 bases:
>100_bases CGCGACCGCGTCGTCATGGCACAGGGGCAGGCGACGTCGCGAAAGACCTGCTATAGAGCGCCCGATCCTTGAAACGGTTG CGTGCCCTCCCTGATTACTC
Downstream 100 bases:
>100_bases AAAACGCGGCGGGCCATCCGACCCGCCGCGTTCCAGATCTTGAACTCGCTGGTCCAGGGCCGAGACCGCCCCGTTGCCGA GCCGCGATGGGCACGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPELQSDLFEMRRLESLSNTIFGVAMTLLAYDLPKPNFAQMPDWSDLVHTYSGRLAGLVLSFIIAGVFWISHHRRLARQP YGSRFVVILNLFFLLSIVLLPVTNGLYSSYRLSSAVAVMYGVHLTIIAALNAALWWLSLPSGRHAEIAGAVFPVIVFVPG IVMAAYAPEYVQYFWMLGFGGFLARRFVATKPETAAGESG
Sequences:
>Translated_200_residues MPELQSDLFEMRRLESLSNTIFGVAMTLLAYDLPKPNFAQMPDWSDLVHTYSGRLAGLVLSFIIAGVFWISHHRRLARQP YGSRFVVILNLFFLLSIVLLPVTNGLYSSYRLSSAVAVMYGVHLTIIAALNAALWWLSLPSGRHAEIAGAVFPVIVFVPG IVMAAYAPEYVQYFWMLGFGGFLARRFVATKPETAAGESG >Mature_199_residues PELQSDLFEMRRLESLSNTIFGVAMTLLAYDLPKPNFAQMPDWSDLVHTYSGRLAGLVLSFIIAGVFWISHHRRLARQPY GSRFVVILNLFFLLSIVLLPVTNGLYSSYRLSSAVAVMYGVHLTIIAALNAALWWLSLPSGRHAEIAGAVFPVIVFVPGI VMAAYAPEYVQYFWMLGFGGFLARRFVATKPETAAGESG
Specific function: Unknown
COG id: COG3548
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22177; Mature: 22046
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELQSDLFEMRRLESLSNTIFGVAMTLLAYDLPKPNFAQMPDWSDLVHTYSGRLAGLVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SFIIAGVFWISHHRRLARQPYGSRFVVILNLFFLLSIVLLPVTNGLYSSYRLSSAVAVMY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHLTIIAALNAALWWLSLPSGRHAEIAGAVFPVIVFVPGIVMAAYAPEYVQYFWMLGFG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLARRFVATKPETAAGESG HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PELQSDLFEMRRLESLSNTIFGVAMTLLAYDLPKPNFAQMPDWSDLVHTYSGRLAGLVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SFIIAGVFWISHHRRLARQPYGSRFVVILNLFFLLSIVLLPVTNGLYSSYRLSSAVAVMY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHLTIIAALNAALWWLSLPSGRHAEIAGAVFPVIVFVPGIVMAAYAPEYVQYFWMLGFG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLARRFVATKPETAAGESG HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA