Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is paaB [H]
Identifier: 146339530
GI number: 146339530
Start: 2694037
End: 2694324
Strand: Direct
Name: paaB [H]
Synonym: BRADO2520
Alternate gene names: 146339530
Gene position: 2694037-2694324 (Clockwise)
Preceding gene: 146339529
Following gene: 146339531
Centisome position: 36.13
GC content: 67.01
Gene sequence:
>288_bases ATGACGACGCCGAACACGCCGTTGTGGGAGGTCTTCATCCGCAGCCGCAACGGGCTCGCGCACAAGCATTGCGGCTCGCT GCATGCGCCCGACGCGACCATGGCGCTGCAGGCCGCGCGCGACCTCTACACCCGCCGCGGCGAGGGCCTGTCGATCTGGG TCGTGCCGTCGAGCGCGATCACCGCATCCGATCCCGCCGACAAGGGCATGATGTTCGAGCCGGCGGAGACGAAGATCTAT CGCCACCCGACGTTCTACGAGGTGCCCGAGGAAGTCGGGCATATGTAG
Upstream 100 bases:
>100_bases TGCCGACGGCGCCTGGGTGCGCGAGGCGGCAGCTGCCTACGCCGAGAAGCGCGCGCGGCGCCAGATGGCGCAGGCCGCCG AATAACAAGGGAGATCTGGA
Downstream 100 bases:
>100_bases TAAATCCTCATGGTGAGGAGGCGCGCAGCGCCGTCTCGAACCATGAGGCCCGATATGGCTCGTAGCCCATCCTTCGAGAC GCCCGCCTGCGGCGGGCTCC
Product: phenylacetate-CoA oxygenase subunit PaaB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTTPNTPLWEVFIRSRNGLAHKHCGSLHAPDATMALQAARDLYTRRGEGLSIWVVPSSAITASDPADKGMMFEPAETKIY RHPTFYEVPEEVGHM
Sequences:
>Translated_95_residues MTTPNTPLWEVFIRSRNGLAHKHCGSLHAPDATMALQAARDLYTRRGEGLSIWVVPSSAITASDPADKGMMFEPAETKIY RHPTFYEVPEEVGHM >Mature_94_residues TTPNTPLWEVFIRSRNGLAHKHCGSLHAPDATMALQAARDLYTRRGEGLSIWVVPSSAITASDPADKGMMFEPAETKIYR HPTFYEVPEEVGHM
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3460
COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787655, Length=95, Percent_Identity=57.8947368421053, Blast_Score=125, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009359 [H]
Pfam domain/function: PF06243 PaaB [H]
EC number: NA
Molecular weight: Translated: 10597; Mature: 10466
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPNTPLWEVFIRSRNGLAHKHCGSLHAPDATMALQAARDLYTRRGEGLSIWVVPSSAI CCCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCE TASDPADKGMMFEPAETKIYRHPTFYEVPEEVGHM ECCCCCCCCEEECCCCCEEEECCCCEECCHHHCCC >Mature Secondary Structure TTPNTPLWEVFIRSRNGLAHKHCGSLHAPDATMALQAARDLYTRRGEGLSIWVVPSSAI CCCCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCE TASDPADKGMMFEPAETKIYRHPTFYEVPEEVGHM ECCCCCCCCEEECCCCCEEEECCCCEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]