Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yegM [C]
Identifier: 146339511
GI number: 146339511
Start: 2670668
End: 2671858
Strand: Direct
Name: yegM [C]
Synonym: BRADO2501
Alternate gene names: 146339511
Gene position: 2670668-2671858 (Clockwise)
Preceding gene: 146339510
Following gene: 146339512
Centisome position: 35.82
GC content: 66.92
Gene sequence:
>1191_bases ATGAACATTGCGACGGAACCCAAGCTCTCCGGAAAGCCGATCGACGACAAGCCGCGCAAGCGCACCCGCCCGGTGCTGTG GTTCATCGTCATCGGCCTGCTGCTCGCGGGACTGGTCGGCGGCCTCGTCTGGTTCAACATGTTCCGCGACAAGATGATCG CGCAGTTCTTCGCGAACATGAAGCCGCCGCCGCTCAACGTTAGCATCGCGACCGCGACCGCGGAGACCGTGCCGAACCTG CTGACCGCGGTCGGCGATCTCGCCGCCGTGCATCAGGTCAACGTGACCGCGGACGCCTCGGGCCGCATCACCGACATCAT GTTCACGCCGGGCACGACGGTGAAGCAGGGCACGCCGCTGGTGCAGCTCTATGACGCGCCGGAGCAGGGCGACCTCGCCA ACTTCAAGGCCCAGGTCACCGTGGCGCAGCTGTCGCTCGACCGTGCCAAGCAACTCGCCTCGCGCCAGTTCGGTCCGCAG GCGACCGTCGACCAGGCCCAGGCCGCCTACGACCAGGCTCAGGCCGGCGTCGCCAAGACCGAGGCGCTGATCGCGCAGAA GCTGGTGCGCGCGCCCTTCGACGGCGAGCTCGGCGTCCGCAAGGTCGATCTCGGCCAGTATCTCTCGGCCGGCACGCAGA TCGTGTCGCTGACCGATCTCTCGCAGCTGTGGGTCAACTTCACTGTGACGGAGAAGGATTCGGGCCAGCTCAAGGTCGGG CAGGTCGTGCGGGTCACCGTCGATGCCTATCCGGGCAAGACCTTCGAGGGCAAGATCACCACGATCGAGCCGCAGATCGC GACCGACACGCGCAACATTCGCGTGCAGGGCACGATCGCCAATCCCGAGCATATCCTCAAGCCGGGCATGTTCGCCACCA CCACCGTGGTGCTGCCGGACAAGCCGCCGGTGCTGACCGTGCCGGAGACGGCGGTCGACTACACGCTGTATGGCGACTCG GTGTTCGTCATCAACGAGAAGAAGACCGATGACGGCAAGACGACGCTGGTGGCGGACCGCACCTATGTCCAGACCGGCGA CCGCGTCAACGGCCGCGCCGAGATCCTCAAGGGCCTGAAGGACGGCGACCGCGTCGTCGCCGTCGGACAGCTCAAGATCC AGTCGGGCGCCGCGGTCGCGATCTCGACCGATCCGCTGCCGCCGGTGCCGGCGAAGCCGCCGCGCTACTGA
Upstream 100 bases:
>100_bases CTGCGCGGCATCGGACTGACTGACGCCGCCATCGCGTGCTATCTCGACCACGAATTGTCGCAACCTCCGGCCCGGCCGGC GACGGCAGAAAGTGCATGAC
Downstream 100 bases:
>100_bases TCGCACATCCGAGCCAATGCCGGGCCGCCACGAGGCAGCCCGGCCGGACCTCATCCGAATTCTGCTGACGGGATTGCCGC GATGCGTTTCACCGATATCT
Product: putative RND efflux membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNIATEPKLSGKPIDDKPRKRTRPVLWFIVIGLLLAGLVGGLVWFNMFRDKMIAQFFANMKPPPLNVSIATATAETVPNL LTAVGDLAAVHQVNVTADASGRITDIMFTPGTTVKQGTPLVQLYDAPEQGDLANFKAQVTVAQLSLDRAKQLASRQFGPQ ATVDQAQAAYDQAQAGVAKTEALIAQKLVRAPFDGELGVRKVDLGQYLSAGTQIVSLTDLSQLWVNFTVTEKDSGQLKVG QVVRVTVDAYPGKTFEGKITTIEPQIATDTRNIRVQGTIANPEHILKPGMFATTTVVLPDKPPVLTVPETAVDYTLYGDS VFVINEKKTDDGKTTLVADRTYVQTGDRVNGRAEILKGLKDGDRVVAVGQLKIQSGAAVAISTDPLPPVPAKPPRY
Sequences:
>Translated_396_residues MNIATEPKLSGKPIDDKPRKRTRPVLWFIVIGLLLAGLVGGLVWFNMFRDKMIAQFFANMKPPPLNVSIATATAETVPNL LTAVGDLAAVHQVNVTADASGRITDIMFTPGTTVKQGTPLVQLYDAPEQGDLANFKAQVTVAQLSLDRAKQLASRQFGPQ ATVDQAQAAYDQAQAGVAKTEALIAQKLVRAPFDGELGVRKVDLGQYLSAGTQIVSLTDLSQLWVNFTVTEKDSGQLKVG QVVRVTVDAYPGKTFEGKITTIEPQIATDTRNIRVQGTIANPEHILKPGMFATTTVVLPDKPPVLTVPETAVDYTLYGDS VFVINEKKTDDGKTTLVADRTYVQTGDRVNGRAEILKGLKDGDRVVAVGQLKIQSGAAVAISTDPLPPVPAKPPRY >Mature_396_residues MNIATEPKLSGKPIDDKPRKRTRPVLWFIVIGLLLAGLVGGLVWFNMFRDKMIAQFFANMKPPPLNVSIATATAETVPNL LTAVGDLAAVHQVNVTADASGRITDIMFTPGTTVKQGTPLVQLYDAPEQGDLANFKAQVTVAQLSLDRAKQLASRQFGPQ ATVDQAQAAYDQAQAGVAKTEALIAQKLVRAPFDGELGVRKVDLGQYLSAGTQIVSLTDLSQLWVNFTVTEKDSGQLKVG QVVRVTVDAYPGKTFEGKITTIEPQIATDTRNIRVQGTIANPEHILKPGMFATTTVVLPDKPPVLTVPETAVDYTLYGDS VFVINEKKTDDGKTTLVADRTYVQTGDRVNGRAEILKGLKDGDRVVAVGQLKIQSGAAVAISTDPLPPVPAKPPRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=345, Percent_Identity=28.1159420289855, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1789665, Length=318, Percent_Identity=25.1572327044025, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87081796, Length=327, Percent_Identity=29.3577981651376, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789929, Length=312, Percent_Identity=25, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 42567; Mature: 42567
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIATEPKLSGKPIDDKPRKRTRPVLWFIVIGLLLAGLVGGLVWFNMFRDKMIAQFFANM CCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPPPLNVSIATATAETVPNLLTAVGDLAAVHQVNVTADASGRITDIMFTPGTTVKQGTPL CCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCE VQLYDAPEQGDLANFKAQVTVAQLSLDRAKQLASRQFGPQATVDQAQAAYDQAQAGVAKT EEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH EALIAQKLVRAPFDGELGVRKVDLGQYLSAGTQIVSLTDLSQLWVNFTVTEKDSGQLKVG HHHHHHHHHHCCCCCCCCCEEECHHHHHHCCCEEEEEECCCEEEEEEEEEECCCCCEEEC QVVRVTVDAYPGKTFEGKITTIEPQIATDTRNIRVQGTIANPEHILKPGMFATTTVVLPD EEEEEEEECCCCCCCCCEEEEECCEEECCCCEEEEEEEECCHHHHHCCCCEEEEEEEECC KPPVLTVPETAVDYTLYGDSVFVINEKKTDDGKTTLVADRTYVQTGDRVNGRAEILKGLK CCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCEEEECCCCCCCHHHHHHCCC DGDRVVAVGQLKIQSGAAVAISTDPLPPVPAKPPRY CCCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNIATEPKLSGKPIDDKPRKRTRPVLWFIVIGLLLAGLVGGLVWFNMFRDKMIAQFFANM CCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPPPLNVSIATATAETVPNLLTAVGDLAAVHQVNVTADASGRITDIMFTPGTTVKQGTPL CCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCE VQLYDAPEQGDLANFKAQVTVAQLSLDRAKQLASRQFGPQATVDQAQAAYDQAQAGVAKT EEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH EALIAQKLVRAPFDGELGVRKVDLGQYLSAGTQIVSLTDLSQLWVNFTVTEKDSGQLKVG HHHHHHHHHHCCCCCCCCCEEECHHHHHHCCCEEEEEECCCEEEEEEEEEECCCCCEEEC QVVRVTVDAYPGKTFEGKITTIEPQIATDTRNIRVQGTIANPEHILKPGMFATTTVVLPD EEEEEEEECCCCCCCCCEEEEECCEEECCCCEEEEEEEECCHHHHHCCCCEEEEEEEECC KPPVLTVPETAVDYTLYGDSVFVINEKKTDDGKTTLVADRTYVQTGDRVNGRAEILKGLK CCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCEEEECCCCCCCHHHHHHCCC DGDRVVAVGQLKIQSGAAVAISTDPLPPVPAKPPRY CCCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]