Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ybjT [C]

Identifier: 146339507

GI number: 146339507

Start: 2665212

End: 2666153

Strand: Direct

Name: ybjT [C]

Synonym: BRADO2496

Alternate gene names: 146339507

Gene position: 2665212-2666153 (Clockwise)

Preceding gene: 146339506

Following gene: 146339510

Centisome position: 35.74

GC content: 69.64

Gene sequence:

>942_bases
ATGCTCGGCGCCACCGGGACGATCGGCCGTGCCACCGTGCGTGCGCTCGTCGCGCGCGGGCACGAGGTGGTCTGCTTCGT
CCGCCCACGCAGCGAGGCCATCACGATTCCTGGCGCCACCGTCAGGACCGGCGACGTCACCGATCCCGCCTCGCTCGTGC
GCGACGGCTTTCGCGGCGAGCGCTTCGATGCCGTCGTGTCCTGCATGGCGTCGCGGACCGGCGTGCCCCGGGATGCCCAG
GCAATCGACTATCAGGCGCATGTCAACGTGCTGGAAGCGGCCCGCGCGGCAGGCGTCACGCAATTCGTGCTGTTGTCCGC
CATCTGCGTGCAGAAGCCGCTGCTGGCGTTTCAGCAGGCCAAGCTCGCGTTCGAGGCGCAGCTGGTCGCGGCGGGCCTGA
CCTACTCGATCGTCCGTCCCACCGCGTTCTTCAAGTCGCTGTCGGGACAGGTCGCGCGGGTGCAGCAGGGCCGGCCCTAC
CTGGTGTTCGGCGATGGCCGCCTCACCGCGTGCAAGCCGATCAGCGATGCCGATCTCGGCGCCTATCTCGCCGGCTGTCT
CGATGATGAGGCGCTCTGGAACCGCGTGCTGCCGATCGGCGGCCCCGGGCCCGCCATCACCCCGCTCGATCAGGCCGAGC
ATCTGTTCGCGCTGCTCGGCCGCAAGCCGAACATCCGTCGCGTCCCGGTGGGCCTGCTCGATGCCATCATCGGCGGGCTC
GACGTCGCCAGGCGGATCGTGCCGTCGCTCGCCGACAAGGCCGAACTCGCCCGCATCGGCCGCTACTACGCCACCGAATC
CATGCTGGTGATGAACCCCGCCACCGGCCGCTACGATGCCGACGCGACGCCGTCCACGGGATCGGACACGTTGTTCGACT
ACTACGCCCGGCTGATCCGCGGCGAAGCCGAGGCCGAACGCGGCGATCACGCGGTGTTCTAA

Upstream 100 bases:

>100_bases
TGTGGTATAGGTCGAACTGGTTCTCAGAGACGCATTTCTGCCTATGAGCTCGCCGGCCGTTCCTTCCGCATCCCACTCGC
TCTATCCCCGCCGCGTGTTC

Downstream 100 bases:

>100_bases
GCCCATCTCTTTCCGCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCCAGGGCCGCACGCGTGGCCCTGGATTGCTTCG
CTACGCGTAACTGCCCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; NmrA-Like Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Dtdp-Glucose-46-Dehydratase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; 3 8-Divinyl Protochlorophyllide A 8-Vinyl Reductase; NADH-Ubiquinone Oxidoreductase; Glucose/Sorbosone Dehydrogenase-Like Protein; NmrA-Like Family Protein

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLGATGTIGRATVRALVARGHEVVCFVRPRSEAITIPGATVRTGDVTDPASLVRDGFRGERFDAVVSCMASRTGVPRDAQ
AIDYQAHVNVLEAARAAGVTQFVLLSAICVQKPLLAFQQAKLAFEAQLVAAGLTYSIVRPTAFFKSLSGQVARVQQGRPY
LVFGDGRLTACKPISDADLGAYLAGCLDDEALWNRVLPIGGPGPAITPLDQAEHLFALLGRKPNIRRVPVGLLDAIIGGL
DVARRIVPSLADKAELARIGRYYATESMLVMNPATGRYDADATPSTGSDTLFDYYARLIRGEAEAERGDHAVF

Sequences:

>Translated_313_residues
MLGATGTIGRATVRALVARGHEVVCFVRPRSEAITIPGATVRTGDVTDPASLVRDGFRGERFDAVVSCMASRTGVPRDAQ
AIDYQAHVNVLEAARAAGVTQFVLLSAICVQKPLLAFQQAKLAFEAQLVAAGLTYSIVRPTAFFKSLSGQVARVQQGRPY
LVFGDGRLTACKPISDADLGAYLAGCLDDEALWNRVLPIGGPGPAITPLDQAEHLFALLGRKPNIRRVPVGLLDAIIGGL
DVARRIVPSLADKAELARIGRYYATESMLVMNPATGRYDADATPSTGSDTLFDYYARLIRGEAEAERGDHAVF
>Mature_313_residues
MLGATGTIGRATVRALVARGHEVVCFVRPRSEAITIPGATVRTGDVTDPASLVRDGFRGERFDAVVSCMASRTGVPRDAQ
AIDYQAHVNVLEAARAAGVTQFVLLSAICVQKPLLAFQQAKLAFEAQLVAAGLTYSIVRPTAFFKSLSGQVARVQQGRPY
LVFGDGRLTACKPISDADLGAYLAGCLDDEALWNRVLPIGGPGPAITPLDQAEHLFALLGRKPNIRRVPVGLLDAIIGGL
DVARRIVPSLADKAELARIGRYYATESMLVMNPATGRYDADATPSTGSDTLFDYYARLIRGEAEAERGDHAVF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33396; Mature: 33396

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGATGTIGRATVRALVARGHEVVCFVRPRSEAITIPGATVRTGDVTDPASLVRDGFRGE
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHCCCCCH
RFDAVVSCMASRTGVPRDAQAIDYQAHVNVLEAARAAGVTQFVLLSAICVQKPLLAFQQA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KLAFEAQLVAAGLTYSIVRPTAFFKSLSGQVARVQQGRPYLVFGDGRLTACKPISDADLG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCEEEECCCCCCHHH
AYLAGCLDDEALWNRVLPIGGPGPAITPLDQAEHLFALLGRKPNIRRVPVGLLDAIIGGL
HHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
DVARRIVPSLADKAELARIGRYYATESMLVMNPATGRYDADATPSTGSDTLFDYYARLIR
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GEAEAERGDHAVF
CCHHHCCCCCCCC
>Mature Secondary Structure
MLGATGTIGRATVRALVARGHEVVCFVRPRSEAITIPGATVRTGDVTDPASLVRDGFRGE
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHCCCCCH
RFDAVVSCMASRTGVPRDAQAIDYQAHVNVLEAARAAGVTQFVLLSAICVQKPLLAFQQA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KLAFEAQLVAAGLTYSIVRPTAFFKSLSGQVARVQQGRPYLVFGDGRLTACKPISDADLG
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCEEEECCCCCCHHH
AYLAGCLDDEALWNRVLPIGGPGPAITPLDQAEHLFALLGRKPNIRRVPVGLLDAIIGGL
HHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
DVARRIVPSLADKAELARIGRYYATESMLVMNPATGRYDADATPSTGSDTLFDYYARLIR
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GEAEAERGDHAVF
CCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA