Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339462
Identifier: 146339462
GI number: 146339462
Start: 2608755
End: 2609468
Strand: Direct
Name: 146339462
Synonym: BRADO2448
Alternate gene names: NA
Gene position: 2608755-2609468 (Clockwise)
Preceding gene: 146339459
Following gene: 146339464
Centisome position: 34.99
GC content: 68.35
Gene sequence:
>714_bases ATGACGGCACTCTCTCCCGACGATGCCGAGCGCTTGCGGCAGGCGTTCCTGCAATGCCGCGGCAGCGCCGCAACGCTGCG TGAGCAACTGGAGGCCTATGCTGCGGCGGGCCGCGAGATCTTCCCGGCCTACGCGGACGCGGTCGACCGGCTGGTGACGC GGCTGCAGGCGAATGGCGGCGGTGAGAACGCGCCGCGCTTGGGCGAGGTGATGCCGCCATTCGTTCTGCCGGACGAGACC GGGCGGCTGGTCGATCTGCCGTCACTGCTGGCGACGGGGCCCGTCGCCGTGATGTTCTTTCGCGGCCACTGGTGTCCGTA TTGTCGGCTCAGCGCCATCGCGCTCGTCCGCGCCCAAGAGCGCATTCGCGCGACTGGCGGCCGGCTCGTCGCCATCACAC CGGAGCTGCAGTCCTTTGCACAGCGCTTCAAGGCCGAGACGGGGGCCGACTTTCCAGTGCTGAGCGATCTCGACAACGGC TATGCCTTGTCGCTCAACCTCGCGATCTGGCTCGGCAGCGACATCCGCGAACTGCTGGCGCATCAGGATTTCGCCGCCTT TCACGGCAACCAGGGCGGCCTGCTGCCGATCCCTGCGGTCTTCGTCGTCGGCCGGGACGGCCTCGTCAAGGCGCGCTACA TCGATCCTGATTTCCGTCGCCGGATGGAGATCGACGATCTCGTTGCCGCGCTCGCGCAGGCCGCCCCCGCCTGA
Upstream 100 bases:
>100_bases TGGCCTGCTCGGTCAGGATGAGCACGAGCAGCCTAGTCAGTCGTATGCGCGAGACCGGTGGATGGCTGATGTTCGGCCGC CTCCAGCAGAGGAGCTGCAC
Downstream 100 bases:
>100_bases TCATGCCGGTGAGCGCGCTCACGCCAGCTGACCCAGCCATTTCTGCCAGTCCCTGCCGCGCAACATGCGCATGACCGCGG ATGCGACGGCGGTCCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin; Peroxiredoxin; AhpC/Tsa Family Protein; Peroxiredoxin-Like Protein; Redoxin Superfamily; Antioxidant AhpC/TSA Family; AhpC-TSA; Peroxiredoxin/AhpC/Tsa Family Protein; AhpC/Tsa Family Protein Selenocysteine-Containing; Peroxiredoxin Family Protein; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTALSPDDAERLRQAFLQCRGSAATLREQLEAYAAAGREIFPAYADAVDRLVTRLQANGGGENAPRLGEVMPPFVLPDET GRLVDLPSLLATGPVAVMFFRGHWCPYCRLSAIALVRAQERIRATGGRLVAITPELQSFAQRFKAETGADFPVLSDLDNG YALSLNLAIWLGSDIRELLAHQDFAAFHGNQGGLLPIPAVFVVGRDGLVKARYIDPDFRRRMEIDDLVAALAQAAPA
Sequences:
>Translated_237_residues MTALSPDDAERLRQAFLQCRGSAATLREQLEAYAAAGREIFPAYADAVDRLVTRLQANGGGENAPRLGEVMPPFVLPDET GRLVDLPSLLATGPVAVMFFRGHWCPYCRLSAIALVRAQERIRATGGRLVAITPELQSFAQRFKAETGADFPVLSDLDNG YALSLNLAIWLGSDIRELLAHQDFAAFHGNQGGLLPIPAVFVVGRDGLVKARYIDPDFRRRMEIDDLVAALAQAAPA >Mature_236_residues TALSPDDAERLRQAFLQCRGSAATLREQLEAYAAAGREIFPAYADAVDRLVTRLQANGGGENAPRLGEVMPPFVLPDETG RLVDLPSLLATGPVAVMFFRGHWCPYCRLSAIALVRAQERIRATGGRLVAITPELQSFAQRFKAETGADFPVLSDLDNGY ALSLNLAIWLGSDIRELLAHQDFAAFHGNQGGLLPIPAVFVVGRDGLVKARYIDPDFRRRMEIDDLVAALAQAAPA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25730; Mature: 25599
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSPDDAERLRQAFLQCRGSAATLREQLEAYAAAGREIFPAYADAVDRLVTRLQANGG CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC GENAPRLGEVMPPFVLPDETGRLVDLPSLLATGPVAVMFFRGHWCPYCRLSAIALVRAQE CCCCCCCHHCCCCCCCCCCCCCEEECHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH RIRATGGRLVAITPELQSFAQRFKAETGADFPVLSDLDNGYALSLNLAIWLGSDIRELLA HHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEEEECHHHHHHHH HQDFAAFHGNQGGLLPIPAVFVVGRDGLVKARYIDPDFRRRMEIDDLVAALAQAAPA HCCHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure TALSPDDAERLRQAFLQCRGSAATLREQLEAYAAAGREIFPAYADAVDRLVTRLQANGG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC GENAPRLGEVMPPFVLPDETGRLVDLPSLLATGPVAVMFFRGHWCPYCRLSAIALVRAQE CCCCCCCHHCCCCCCCCCCCCCEEECHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH RIRATGGRLVAITPELQSFAQRFKAETGADFPVLSDLDNGYALSLNLAIWLGSDIRELLA HHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEEEECHHHHHHHH HQDFAAFHGNQGGLLPIPAVFVVGRDGLVKARYIDPDFRRRMEIDDLVAALAQAAPA HCCHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA