Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is fixI [H]
Identifier: 146339458
GI number: 146339458
Start: 2604145
End: 2606346
Strand: Direct
Name: fixI [H]
Synonym: BRADO2444
Alternate gene names: 146339458
Gene position: 2604145-2606346 (Clockwise)
Preceding gene: 146339457
Following gene: 146339459
Centisome position: 34.92
GC content: 68.3
Gene sequence:
>2202_bases ATGCACGTGACGCGTGACTTCTCCCACTATGTGAAAGATCTCGGCAAGGGCCTCAAGCACATCGACCTCGCGGTCGAGGG CGTGAGCTGCGCCGGCTGCATGGCCAAGATCGAGCGCGGCTTGTCGGCGCTGCCGGATGTGACCTTGGCGCGCGTCAATC TCACCGACCGCCGCGTCGCGCTGGAGTGGAAGCAGGGCACGCTCGATCCGGCAAAATTCATCGATCGCCTCGCCGAGCTC GGCTACAAGGCCTATCCGTTCGAGAAGGCGAGCGCAGAGGCCACCGAAGCCGAGGAATCGCGCTTCCTCCTGCGCTGCCT CGGCGTCGCGGCGTTCGCGACCATGAACGTGATGATGCTGTCGATCCCGGTCTGGTCCGGCAATGTCAGCGACATGCTGC CGGAGCAGCGCGACTTCTTCCACTGGCTGTCGGCCGTGATCGCGCTGCCGGCCGCGGCCTATGCCGGCCAGCCGTTCTTC CGCTCGGCGTGGCGCGCCTTGAAGACCGGTAACGTCAACATGGACGTGCCGATCTGCATCGGCGTGATCCTGGCCTTGGG CATGTCGATCGTCGAGACGTTCCATCACGCCGAGCACGCTTATTTCGATGCCGCGATCATGCTGCTGACCTTCCTCCTGG TCGGCCGCTATCTCGATCAGAACATGCGGCGGCGGACCCGGGCGGTCGCCGGCAATCTCGCCGCGCTGAAGGCGGAGACC GCGACCAAGTTCATCGGCCCGGATGAAATCTCCGAGGTGCCCGTGGCCGCCGTCCGCGCCGGCGATCTGGTGCTGCTGCG CCCCGGCGAGCGTTGCGCCGTCGACGGCGTCGTGATCGAGGGCCGCTCCGAGATCGACCAGAGCCTGATCACCGGCGAGA CGCTGTATGTGCCGGCCGAGCAGGGCACCGCGGTCTATGCCGGCTCGCTGAACATTTCCGGCACGCTGCGCGTCCGCGTC TCGGCCGCCGCCGAGGGCACGCTGCTCGCCGAGATCACGCGCCTGCTCGACACAGCGCTGCAGGCGCGCTCGCGCTACAT GCGGCTCGCCGATCGCGCCTCGCGGCTGTATGCGCCGGTGGTGCACGCCACCGCCGCGCTGACGGTGCTGGGCTGGGTGC TGGCCGGCGCGAGCTGGCACGATGCCATCGTCACCGGCATCGCCGTGCTGATCATCACCTGTCCCTGCGCGCTCGGCCTT GCCATTCCCACCGTGCAGACGGTCGCCTCCGGCGCGATGTTCAAGTCAGGCGTGCTGCTCAATGCGGGCGACGCGATCGA GCGGCTCGCCGAGGCCGATCACGTGATCTTCGATAAGACCGGCACCTTGACCTTGCCGGAGCTCGAAGTGGTCAACGCCG CCGACATTCCGGCGGATGTCTTCTCCGTCGCCGGCCAGCTCGCGCTGTCGAGCCATCACCCCGTGGCGGCGGCGGTCGCG CAGGCCGCGAAGTCGCGGTCGCCGCTGATGGGCGCGGTCGAGGAGCCCGGGCAGGGCGTGCGCGCGGTGGTCGATGGCGT CGAGCTCCGGCTTGGCCGTCCCTCCTTCTGCGACGCCGAGGCGCTGGTGGCGCAGAGCGCCAGCGTCGATCCCGAAGCGT CCGTCGTGGCCTTCTGCCGTGGCGATCAAAAATATCTGTTCTCCGTGCGCCAGGGTTTGCGTCCCGATGCCGCGAAGATC GTCGCCGGCCTGCAGCGCCGCGGCATCAAGGTCGAAATCCTCTCGGGCGATCGCGAGGCGGCCGTCGCCGCCGCCGCGAA GGCGCTCGGGATCAGCGAATGGCGCGCCGGCGTCACCCCGGCCGACAAGATCGCTCGCGTCGAAGAGCTGAAGCGCGCCA ACGTCAAGGTCATGATGGTCGGCGACGGCATGAACGACGCGCCGTCGCTCGCTGCCGCGCATGTCTCGATGTCGCCGATC TCGGCTGCGCATCTCAGCCAGGCTACCGCCGATCTCGTCTTCCTCGGCCGTCCCTTGGCGCCGGTGCTGGCCGCGATCGA CTATGCGCGCAAGGCGCTGCATCTGATGCGGCAAAATCTCTGGCTCGCGGTGCTCTACAATCTGTTCGCCGTGCCGCTCG CCATCAGCGGCGTCGTCACGCCCTTGATCGCGGCCGCCGCGATGTCGGGCTCGTCGATCCTGGTGATGCTGAATGCGCTG CGCGCCCGCAAGGTCCGCGAGGAGGCCGCGTCATGGAAGTGA
Upstream 100 bases:
>100_bases CGCCGGGCCAGTGGGATCTCGTGCTCGAAGGTGATTCCAGCGGTCGGCGGCTGTTCCTGTCGAAGAACCGCGTGCTGCTG AACTGAAGGACTGACTGATC
Downstream 100 bases:
>100_bases TGATCATTCTCGTCCCGCTCGCACTCGCACTGGGCTTGGCCGGCCTGGTCGGCTTCCTCTGGTCGCTGAAGAGCGGCCAG TACGAGGATCTCGAAGGCGC
Product: nitrogen fixation protein fixI
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MHVTRDFSHYVKDLGKGLKHIDLAVEGVSCAGCMAKIERGLSALPDVTLARVNLTDRRVALEWKQGTLDPAKFIDRLAEL GYKAYPFEKASAEATEAEESRFLLRCLGVAAFATMNVMMLSIPVWSGNVSDMLPEQRDFFHWLSAVIALPAAAYAGQPFF RSAWRALKTGNVNMDVPICIGVILALGMSIVETFHHAEHAYFDAAIMLLTFLLVGRYLDQNMRRRTRAVAGNLAALKAET ATKFIGPDEISEVPVAAVRAGDLVLLRPGERCAVDGVVIEGRSEIDQSLITGETLYVPAEQGTAVYAGSLNISGTLRVRV SAAAEGTLLAEITRLLDTALQARSRYMRLADRASRLYAPVVHATAALTVLGWVLAGASWHDAIVTGIAVLIITCPCALGL AIPTVQTVASGAMFKSGVLLNAGDAIERLAEADHVIFDKTGTLTLPELEVVNAADIPADVFSVAGQLALSSHHPVAAAVA QAAKSRSPLMGAVEEPGQGVRAVVDGVELRLGRPSFCDAEALVAQSASVDPEASVVAFCRGDQKYLFSVRQGLRPDAAKI VAGLQRRGIKVEILSGDREAAVAAAAKALGISEWRAGVTPADKIARVEELKRANVKVMMVGDGMNDAPSLAAAHVSMSPI SAAHLSQATADLVFLGRPLAPVLAAIDYARKALHLMRQNLWLAVLYNLFAVPLAISGVVTPLIAAAAMSGSSILVMLNAL RARKVREEAASWK
Sequences:
>Translated_733_residues MHVTRDFSHYVKDLGKGLKHIDLAVEGVSCAGCMAKIERGLSALPDVTLARVNLTDRRVALEWKQGTLDPAKFIDRLAEL GYKAYPFEKASAEATEAEESRFLLRCLGVAAFATMNVMMLSIPVWSGNVSDMLPEQRDFFHWLSAVIALPAAAYAGQPFF RSAWRALKTGNVNMDVPICIGVILALGMSIVETFHHAEHAYFDAAIMLLTFLLVGRYLDQNMRRRTRAVAGNLAALKAET ATKFIGPDEISEVPVAAVRAGDLVLLRPGERCAVDGVVIEGRSEIDQSLITGETLYVPAEQGTAVYAGSLNISGTLRVRV SAAAEGTLLAEITRLLDTALQARSRYMRLADRASRLYAPVVHATAALTVLGWVLAGASWHDAIVTGIAVLIITCPCALGL AIPTVQTVASGAMFKSGVLLNAGDAIERLAEADHVIFDKTGTLTLPELEVVNAADIPADVFSVAGQLALSSHHPVAAAVA QAAKSRSPLMGAVEEPGQGVRAVVDGVELRLGRPSFCDAEALVAQSASVDPEASVVAFCRGDQKYLFSVRQGLRPDAAKI VAGLQRRGIKVEILSGDREAAVAAAAKALGISEWRAGVTPADKIARVEELKRANVKVMMVGDGMNDAPSLAAAHVSMSPI SAAHLSQATADLVFLGRPLAPVLAAIDYARKALHLMRQNLWLAVLYNLFAVPLAISGVVTPLIAAAAMSGSSILVMLNAL RARKVREEAASWK >Mature_733_residues MHVTRDFSHYVKDLGKGLKHIDLAVEGVSCAGCMAKIERGLSALPDVTLARVNLTDRRVALEWKQGTLDPAKFIDRLAEL GYKAYPFEKASAEATEAEESRFLLRCLGVAAFATMNVMMLSIPVWSGNVSDMLPEQRDFFHWLSAVIALPAAAYAGQPFF RSAWRALKTGNVNMDVPICIGVILALGMSIVETFHHAEHAYFDAAIMLLTFLLVGRYLDQNMRRRTRAVAGNLAALKAET ATKFIGPDEISEVPVAAVRAGDLVLLRPGERCAVDGVVIEGRSEIDQSLITGETLYVPAEQGTAVYAGSLNISGTLRVRV SAAAEGTLLAEITRLLDTALQARSRYMRLADRASRLYAPVVHATAALTVLGWVLAGASWHDAIVTGIAVLIITCPCALGL AIPTVQTVASGAMFKSGVLLNAGDAIERLAEADHVIFDKTGTLTLPELEVVNAADIPADVFSVAGQLALSSHHPVAAAVA QAAKSRSPLMGAVEEPGQGVRAVVDGVELRLGRPSFCDAEALVAQSASVDPEASVVAFCRGDQKYLFSVRQGLRPDAAKI VAGLQRRGIKVEILSGDREAAVAAAAKALGISEWRAGVTPADKIARVEELKRANVKVMMVGDGMNDAPSLAAAHVSMSPI SAAHLSQATADLVFLGRPLAPVLAAIDYARKALHLMRQNLWLAVLYNLFAVPLAISGVVTPLIAAAAMSGSSILVMLNAL RARKVREEAASWK
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=816, Percent_Identity=27.5735294117647, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI115529486, Length=825, Percent_Identity=25.8181818181818, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI55743073, Length=545, Percent_Identity=29.3577981651376, Blast_Score=196, Evalue=5e-50, Organism=Escherichia coli, GI1786691, Length=735, Percent_Identity=30.7482993197279, Blast_Score=274, Evalue=2e-74, Organism=Escherichia coli, GI1789879, Length=715, Percent_Identity=28.8111888111888, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1786914, Length=498, Percent_Identity=26.9076305220884, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17556548, Length=804, Percent_Identity=25.6218905472637, Blast_Score=196, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320475, Length=748, Percent_Identity=25.668449197861, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6319772, Length=629, Percent_Identity=29.093799682035, Blast_Score=227, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6321430, Length=537, Percent_Identity=23.463687150838, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6325221, Length=558, Percent_Identity=23.4767025089606, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI221329854, Length=582, Percent_Identity=28.3505154639175, Blast_Score=192, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 77935; Mature: 77935
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVTRDFSHYVKDLGKGLKHIDLAVEGVSCAGCMAKIERGLSALPDVTLARVNLTDRRVA CCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE LEWKQGTLDPAKFIDRLAELGYKAYPFEKASAEATEAEESRFLLRCLGVAAFATMNVMML EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE SIPVWSGNVSDMLPEQRDFFHWLSAVIALPAAAYAGQPFFRSAWRALKTGNVNMDVPICI EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHH GVILALGMSIVETFHHAEHAYFDAAIMLLTFLLVGRYLDQNMRRRTRAVAGNLAALKAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ATKFIGPDEISEVPVAAVRAGDLVLLRPGERCAVDGVVIEGRSEIDQSLITGETLYVPAE HHHCCCCCHHHHCCCHHEECCCEEEECCCCCEEECCEEECCHHHHHHHHHCCCEEEEECC QGTAVYAGSLNISGTLRVRVSAAAEGTLLAEITRLLDTALQARSRYMRLADRASRLYAPV CCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHATAALTVLGWVLAGASWHDAIVTGIAVLIITCPCALGLAIPTVQTVASGAMFKSGVLL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEE NAGDAIERLAEADHVIFDKTGTLTLPELEVVNAADIPADVFSVAGQLALSSHHPVAAAVA ECCHHHHHHHHCCCEEEECCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHH QAAKSRSPLMGAVEEPGQGVRAVVDGVELRLGRPSFCDAEALVAQSASVDPEASVVAFCR HHHHCCCCCCCCCCCCCCCHHHHHCCHHEECCCCCCCCHHHHHHHCCCCCCCCCEEEEEC GDQKYLFSVRQGLRPDAAKIVAGLQRRGIKVEILSGDREAAVAAAAKALGISEWRAGVTP CCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCHHHHHCCCCC ADKIARVEELKRANVKVMMVGDGMNDAPSLAAAHVSMSPISAAHLSQATADLVFLGRPLA HHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCHH PVLAAIDYARKALHLMRQNLWLAVLYNLFAVPLAISGVVTPLIAAAAMSGSSILVMLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RARKVREEAASWK HHHHHHHHHCCCC >Mature Secondary Structure MHVTRDFSHYVKDLGKGLKHIDLAVEGVSCAGCMAKIERGLSALPDVTLARVNLTDRRVA CCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE LEWKQGTLDPAKFIDRLAELGYKAYPFEKASAEATEAEESRFLLRCLGVAAFATMNVMML EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE SIPVWSGNVSDMLPEQRDFFHWLSAVIALPAAAYAGQPFFRSAWRALKTGNVNMDVPICI EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHH GVILALGMSIVETFHHAEHAYFDAAIMLLTFLLVGRYLDQNMRRRTRAVAGNLAALKAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ATKFIGPDEISEVPVAAVRAGDLVLLRPGERCAVDGVVIEGRSEIDQSLITGETLYVPAE HHHCCCCCHHHHCCCHHEECCCEEEECCCCCEEECCEEECCHHHHHHHHHCCCEEEEECC QGTAVYAGSLNISGTLRVRVSAAAEGTLLAEITRLLDTALQARSRYMRLADRASRLYAPV CCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHATAALTVLGWVLAGASWHDAIVTGIAVLIITCPCALGLAIPTVQTVASGAMFKSGVLL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEE NAGDAIERLAEADHVIFDKTGTLTLPELEVVNAADIPADVFSVAGQLALSSHHPVAAAVA ECCHHHHHHHHCCCEEEECCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHH QAAKSRSPLMGAVEEPGQGVRAVVDGVELRLGRPSFCDAEALVAQSASVDPEASVVAFCR HHHHCCCCCCCCCCCCCCCHHHHHCCHHEECCCCCCCCHHHHHHHCCCCCCCCCEEEEEC GDQKYLFSVRQGLRPDAAKIVAGLQRRGIKVEILSGDREAAVAAAAKALGISEWRAGVTP CCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCHHHHHCCCCC ADKIARVEELKRANVKVMMVGDGMNDAPSLAAAHVSMSPISAAHLSQATADLVFLGRPLA HHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCHH PVLAAIDYARKALHLMRQNLWLAVLYNLFAVPLAISGVVTPLIAAAAMSGSSILVMLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RARKVREEAASWK HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661920; 12597275 [H]