| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339445
Identifier: 146339445
GI number: 146339445
Start: 2592028
End: 2593269
Strand: Direct
Name: 146339445
Synonym: BRADO2431
Alternate gene names: NA
Gene position: 2592028-2593269 (Clockwise)
Preceding gene: 146339444
Following gene: 146339450
Centisome position: 34.76
GC content: 66.75
Gene sequence:
>1242_bases GTGCAGCAGCATCCGGGCCCCGCCGCGAAGCCGTTGCCGTCGCGGCAGAGCCTGCGCGGGCTCGACTGGTTCATCTTCTT CCTTGCCGACGTCCAGACCGGCTTCGGCCCGTTCATCGCGGTGTACCTCACGACGCAGAAATGGACCCAGGCCCAGATCG GCCTGGTGCTGTCGATCGGCGGCATCGTCGGGCTGATCGGACAGATGCCTGGCGGCGCGATCATCGATGCGGCGAAATCG GAGCGGCGCGTGGCGGGATTCGCCGTGGCTGCCATCGGCTGCTGCGCGCTGGCCTATGCGGTGTGGCCGATCTTTCCAGT CGTGGCCGGCGCCGCAACCTTGCATGCGGCGGCGAGCTGCGTGCTCGGACCCGCGATCGCCGCGATCAGCCTCGGTCTCG TCGGCCCGCTTGGCATGGCCGAGCGTCTCGGCCGCAATGCGCGCTTCGCCTCGCTCGGCAATGGCGTCGCGGCGGCGATC ATGGGGACGTGCGGCTATCTGCTGTCCAGCCGCGCGGTTTTTCTTGTCACCTTCATCCTCGCATTCCCGACCTTGATCGC ACTGTCGCGGATCCGCGAGCACGAGATCGACGTCGCCCGGGCCCATGGTCACGCCGTCCAGGAGGACAGAGAGGTCGCGC GGCTGTCGAATCTGCTCGGCCTGTTGCGTCAGCGTGCGCTGCTCGTGTTCGCGCTCGGCGTGTTCCTGCTGCAGCTCGCC AATGCGGCGATGCTGCCGCTGATGGCTGGCGTGGTCACGACGAAATCGAGCGAGTGGGCGCCGATGCTGATCGCGTTCTG CATCGTGGTGCCGCAAGCGATCGTCGCGCTGACCTCGCCGTCAGTCGGCGCGGTGGCGCAACAATGGGGTAGGCGGCCGC TGCTGATGCTGGGATTTGCGGCGCTCACGATCCGTGGCGCGTTATTTGCCGTCGTTCACGATCCCTACGTGCTGGTCGCG GTGCAGATCTTCGACGGCGTCACCGCTGCAGTATTCGCCGTGATGATTCCACTGACGGTGGCCGATGTCGCATTTGGCAG CGGCCACTTCAATCTGGCGCAAGGCATCGTCGGCACCGCGTCGGGCGTCGGTGGCTCATTATCCACCGTGGTCGCCGGCT TTGCGAGTGACCGGTTTGGCAGCGCCACCGCCTTCATGGGTCTGTCAGGCGTGGCTCTGACAGGTCTTGTGTTGATCGCG CTGCTGATGCCGGAAACGGGGCAGCGCGTGCGGAGAGGCTGA
Upstream 100 bases:
>100_bases AATTGAAACGTTGAGAGCCATGCCGATCGCACGGCCGTCCAGATCACCTGACCGGGAGCCCGCGCCGGAGCGCGCGGCGG AGACGGACGCGCGCCCGGAC
Downstream 100 bases:
>100_bases GAGCGATCGCGCTCAGGCGTCCATGCTGCGCAGGCGCTGACGGTTGCGCAGCACGATCTGACGGGCACCGGAGAACCCGA GAATGCCCTGGCTCTGCAGC
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MQQHPGPAAKPLPSRQSLRGLDWFIFFLADVQTGFGPFIAVYLTTQKWTQAQIGLVLSIGGIVGLIGQMPGGAIIDAAKS ERRVAGFAVAAIGCCALAYAVWPIFPVVAGAATLHAAASCVLGPAIAAISLGLVGPLGMAERLGRNARFASLGNGVAAAI MGTCGYLLSSRAVFLVTFILAFPTLIALSRIREHEIDVARAHGHAVQEDREVARLSNLLGLLRQRALLVFALGVFLLQLA NAAMLPLMAGVVTTKSSEWAPMLIAFCIVVPQAIVALTSPSVGAVAQQWGRRPLLMLGFAALTIRGALFAVVHDPYVLVA VQIFDGVTAAVFAVMIPLTVADVAFGSGHFNLAQGIVGTASGVGGSLSTVVAGFASDRFGSATAFMGLSGVALTGLVLIA LLMPETGQRVRRG
Sequences:
>Translated_413_residues MQQHPGPAAKPLPSRQSLRGLDWFIFFLADVQTGFGPFIAVYLTTQKWTQAQIGLVLSIGGIVGLIGQMPGGAIIDAAKS ERRVAGFAVAAIGCCALAYAVWPIFPVVAGAATLHAAASCVLGPAIAAISLGLVGPLGMAERLGRNARFASLGNGVAAAI MGTCGYLLSSRAVFLVTFILAFPTLIALSRIREHEIDVARAHGHAVQEDREVARLSNLLGLLRQRALLVFALGVFLLQLA NAAMLPLMAGVVTTKSSEWAPMLIAFCIVVPQAIVALTSPSVGAVAQQWGRRPLLMLGFAALTIRGALFAVVHDPYVLVA VQIFDGVTAAVFAVMIPLTVADVAFGSGHFNLAQGIVGTASGVGGSLSTVVAGFASDRFGSATAFMGLSGVALTGLVLIA LLMPETGQRVRRG >Mature_413_residues MQQHPGPAAKPLPSRQSLRGLDWFIFFLADVQTGFGPFIAVYLTTQKWTQAQIGLVLSIGGIVGLIGQMPGGAIIDAAKS ERRVAGFAVAAIGCCALAYAVWPIFPVVAGAATLHAAASCVLGPAIAAISLGLVGPLGMAERLGRNARFASLGNGVAAAI MGTCGYLLSSRAVFLVTFILAFPTLIALSRIREHEIDVARAHGHAVQEDREVARLSNLLGLLRQRALLVFALGVFLLQLA NAAMLPLMAGVVTTKSSEWAPMLIAFCIVVPQAIVALTSPSVGAVAQQWGRRPLLMLGFAALTIRGALFAVVHDPYVLVA VQIFDGVTAAVFAVMIPLTVADVAFGSGHFNLAQGIVGTASGVGGSLSTVVAGFASDRFGSATAFMGLSGVALTGLVLIA LLMPETGQRVRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42717; Mature: 42717
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQHPGPAAKPLPSRQSLRGLDWFIFFLADVQTGFGPFIAVYLTTQKWTQAQIGLVLSIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH GIVGLIGQMPGGAIIDAAKSERRVAGFAVAAIGCCALAYAVWPIFPVVAGAATLHAAASC HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGPAIAAISLGLVGPLGMAERLGRNARFASLGNGVAAAIMGTCGYLLSSRAVFLVTFIL HHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHH AFPTLIALSRIREHEIDVARAHGHAVQEDREVARLSNLLGLLRQRALLVFALGVFLLQLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAAMLPLMAGVVTTKSSEWAPMLIAFCIVVPQAIVALTSPSVGAVAQQWGRRPLLMLGFA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH ALTIRGALFAVVHDPYVLVAVQIFDGVTAAVFAVMIPLTVADVAFGSGHFNLAQGIVGTA HHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC SGVGGSLSTVVAGFASDRFGSATAFMGLSGVALTGLVLIALLMPETGQRVRRG CCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MQQHPGPAAKPLPSRQSLRGLDWFIFFLADVQTGFGPFIAVYLTTQKWTQAQIGLVLSIG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH GIVGLIGQMPGGAIIDAAKSERRVAGFAVAAIGCCALAYAVWPIFPVVAGAATLHAAASC HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGPAIAAISLGLVGPLGMAERLGRNARFASLGNGVAAAIMGTCGYLLSSRAVFLVTFIL HHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHH AFPTLIALSRIREHEIDVARAHGHAVQEDREVARLSNLLGLLRQRALLVFALGVFLLQLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAAMLPLMAGVVTTKSSEWAPMLIAFCIVVPQAIVALTSPSVGAVAQQWGRRPLLMLGFA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH ALTIRGALFAVVHDPYVLVAVQIFDGVTAAVFAVMIPLTVADVAFGSGHFNLAQGIVGTA HHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC SGVGGSLSTVVAGFASDRFGSATAFMGLSGVALTGLVLIALLMPETGQRVRRG CCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]