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The map label for this gene is cyoD [H]

Identifier: 146339413

GI number: 146339413

Start: 2556549

End: 2556956

Strand: Direct

Name: cyoD [H]

Synonym: BRADO2398

Alternate gene names: 146339413

Gene position: 2556549-2556956 (Clockwise)

Preceding gene: 146339412

Following gene: 146339415

Centisome position: 34.29

GC content: 64.22

Gene sequence:

>408_bases
ATGACCGATCACGCTCAGGAGCTCGGCAAGCAGGAGTTTGGCGACCGCAGCGACCTTGCGCCCGGCGAGCAGCAGCCCGG
CGAACTGCGCGCGCGCATCCTGTTCTACCTCGCCGGCCTCGGCCTTGCGGTGCTGCTGACGGCGACCTCGTTCTTCATCG
CCGGCACCCATCTCGTTTGGCGGCCCTCGATTCCCGTGGCGCTGATCGTGCTGGCGATCGCGCAGATGGGCGTACACCTG
GTGTTCTTCCTGCACATCACCACCGGCCCCGACAACACCAACAACGTGCTGGCGCTGGCGTTCGGGCTGATCATCGTTGT
CCTCGTCGTAGGCGGTTCGCTGTGGATCATGGCGAACCTCAACCACAACATGATGCCGATGACCCAGCTGATGCAGATGC
AGCGCTGA

Upstream 100 bases:

>100_bases
ACATCGAGCGCCGCATCCTGTGCTTCGCGCTGTTCTGGCATGCGCTCGACATCATCTGGGTCGCGGTGTTCTCCGTCGTT
TATCTGCTCGGGAGTGCGAC

Downstream 100 bases:

>100_bases
GCCGGTCTTGCTCGGTGCGTAGGGTGGGCAAAGCGACGCCGCAGGCGGCGCGTGCCCACCATCTTTCAGCGCACGCGGTG
GGGACGGTGGGCACGGCGCG

Product: cytochrome O ubiquinol oxidase protein subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTDHAQELGKQEFGDRSDLAPGEQQPGELRARILFYLAGLGLAVLLTATSFFIAGTHLVWRPSIPVALIVLAIAQMGVHL
VFFLHITTGPDNTNNVLALAFGLIIVVLVVGGSLWIMANLNHNMMPMTQLMQMQR

Sequences:

>Translated_135_residues
MTDHAQELGKQEFGDRSDLAPGEQQPGELRARILFYLAGLGLAVLLTATSFFIAGTHLVWRPSIPVALIVLAIAQMGVHL
VFFLHITTGPDNTNNVLALAFGLIIVVLVVGGSLWIMANLNHNMMPMTQLMQMQR
>Mature_134_residues
TDHAQELGKQEFGDRSDLAPGEQQPGELRARILFYLAGLGLAVLLTATSFFIAGTHLVWRPSIPVALIVLAIAQMGVHLV
FFLHITTGPDNTNNVLALAFGLIIVVLVVGGSLWIMANLNHNMMPMTQLMQMQR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=107, Percent_Identity=33.6448598130841, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 14749; Mature: 14618

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHAQELGKQEFGDRSDLAPGEQQPGELRARILFYLAGLGLAVLLTATSFFIAGTHLVW
CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RPSIPVALIVLAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLIIVVLVVGGSLWIMANL
CCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
NHNMMPMTQLMQMQR
CCCCCHHHHHHHHCC
>Mature Secondary Structure 
TDHAQELGKQEFGDRSDLAPGEQQPGELRARILFYLAGLGLAVLLTATSFFIAGTHLVW
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RPSIPVALIVLAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLIIVVLVVGGSLWIMANL
CCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
NHNMMPMTQLMQMQR
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]