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The map label for this gene is rbsC [H]

Identifier: 146339380

GI number: 146339380

Start: 2517719

End: 2518816

Strand: Direct

Name: rbsC [H]

Synonym: BRADO2362

Alternate gene names: 146339380

Gene position: 2517719-2518816 (Clockwise)

Preceding gene: 146339379

Following gene: 146339381

Centisome position: 33.77

GC content: 66.12

Gene sequence:

>1098_bases
ATGTCCGTTCCATCCGAGACCAGCCCCGCGAGCCCCGACGTCACCTTCACCAATGTCGGCGCCGCACGCTGGTGGCACCG
CGGCGTGTTCGCCTCGCAGACCGCCTATGTGACGCTGGCGCTGGTCGCGCTCATCATCGTGATGAGCTTCGCCAGCCCTT
ATTTCCTCACCGAAGGCAACCTGCAGAACGTCGCCAAGAACTTCTCCTTCATCGCGATCGCGACGCTCGGCATCACCTTC
GTCATCATCACCGGGGGCATCGACCTGTCGGTCGGCTCGATGATGTGCCTCGCCGCGATGATCACCTCGATGGTGATGGT
GACGCTGTCGACGCCCGGCACGCCGCTGGCCGCGCTGTTCGTGCATCTCGCCGCCGACGGCAAGACCGTGGTCGCCAACG
TGCCCGGGCTTATCCTGCTGGTGTCGGTGCTGGCAGGGCTTGCCGTGTCGGTGCTGGTCGGCCTCATCAACGGGATGTGC
ATCGCCATTCTCGGCCTGTCGCCGTTTGTGACCACGCTCGGCATGCTCTCGATCGTGCGCGGCCTCTGCTACGTCATCTC
CAACGGCCGCGGCAGCTTTCCCGGCGGTCCGGATGCCGACTATTTCTATGCGCTGACCTCGGGCGACGTCTATGGCGTGC
CGGCGCCGTTCATCTACCTGATGGTGCTGGCGCTGGCGATGGCGCTGGTTCTGCATCACAGCGCGTTCGGCCGCCACGTC
TTCGCGATCGGCGGCAACGAGAAGGCGGCCGAGCTGACCGGCATCTCGGTGACGCGGGTCAAGATCGAGGTCTATGTGAT
CGGCGCGGTGGCTGCGGGGCTGCAGGGCATCATCATCTCCGGCTGGCTGGGCTCGGCGCCGGCCAACATGGCGACGTCCT
ACGAGCTCAACGTGATCGCCGCCGCCGTGATCGGCGGTGCCAATCTCGCCGGCGGTCTCGGCGGTCCGCTCGGCGCCATC
GTCGGCTGCGTGCTGCTCGAGGTGATCAGGAACGGGCTGGTGCTGGCGCAGGTCAATTCGTACTGGCAGCAGACGCTGGT
CGGCGTGATCATCATCGCCGCCGTACTGGTCGATCGCATCCGCTCGCGGCTGCTGTAG

Upstream 100 bases:

>100_bases
TGGTGATGCGGCGCGGCGAGAAGAGGGCCGACAAGCCGGTCGGCGAGACCAGTCCCGAGGAAGTCACCGCGCTGATCACC
GGCGCCAAGGAGGCGGCGTG

Downstream 100 bases:

>100_bases
TCAAATGAGGATACTGGCCGGGATGAGACTGATCACGTCTATCCGCACCCGGCACAGACAATCATCATGGATAGACGATG
AGGAGGGAAACCCATGAAGA

Product: high-affinity D-ribose ABC transporter membrane protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSVPSETSPASPDVTFTNVGAARWWHRGVFASQTAYVTLALVALIIVMSFASPYFLTEGNLQNVAKNFSFIAIATLGITF
VIITGGIDLSVGSMMCLAAMITSMVMVTLSTPGTPLAALFVHLAADGKTVVANVPGLILLVSVLAGLAVSVLVGLINGMC
IAILGLSPFVTTLGMLSIVRGLCYVISNGRGSFPGGPDADYFYALTSGDVYGVPAPFIYLMVLALAMALVLHHSAFGRHV
FAIGGNEKAAELTGISVTRVKIEVYVIGAVAAGLQGIIISGWLGSAPANMATSYELNVIAAAVIGGANLAGGLGGPLGAI
VGCVLLEVIRNGLVLAQVNSYWQQTLVGVIIIAAVLVDRIRSRLL

Sequences:

>Translated_365_residues
MSVPSETSPASPDVTFTNVGAARWWHRGVFASQTAYVTLALVALIIVMSFASPYFLTEGNLQNVAKNFSFIAIATLGITF
VIITGGIDLSVGSMMCLAAMITSMVMVTLSTPGTPLAALFVHLAADGKTVVANVPGLILLVSVLAGLAVSVLVGLINGMC
IAILGLSPFVTTLGMLSIVRGLCYVISNGRGSFPGGPDADYFYALTSGDVYGVPAPFIYLMVLALAMALVLHHSAFGRHV
FAIGGNEKAAELTGISVTRVKIEVYVIGAVAAGLQGIIISGWLGSAPANMATSYELNVIAAAVIGGANLAGGLGGPLGAI
VGCVLLEVIRNGLVLAQVNSYWQQTLVGVIIIAAVLVDRIRSRLL
>Mature_364_residues
SVPSETSPASPDVTFTNVGAARWWHRGVFASQTAYVTLALVALIIVMSFASPYFLTEGNLQNVAKNFSFIAIATLGITFV
IITGGIDLSVGSMMCLAAMITSMVMVTLSTPGTPLAALFVHLAADGKTVVANVPGLILLVSVLAGLAVSVLVGLINGMCI
AILGLSPFVTTLGMLSIVRGLCYVISNGRGSFPGGPDADYFYALTSGDVYGVPAPFIYLMVLALAMALVLHHSAFGRHVF
AIGGNEKAAELTGISVTRVKIEVYVIGAVAAGLQGIIISGWLGSAPANMATSYELNVIAAAVIGGANLAGGLGGPLGAIV
GCVLLEVIRNGLVLAQVNSYWQQTLVGVIIIAAVLVDRIRSRLL

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=350, Percent_Identity=35.7142857142857, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790524, Length=363, Percent_Identity=30.5785123966942, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1788896, Length=315, Percent_Identity=33.968253968254, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI145693152, Length=365, Percent_Identity=31.7808219178082, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1789992, Length=361, Percent_Identity=30.7479224376731, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1788471, Length=334, Percent_Identity=33.2335329341317, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787794, Length=329, Percent_Identity=27.9635258358663, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI87082395, Length=311, Percent_Identity=28.9389067524116, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI145693214, Length=294, Percent_Identity=29.5918367346939, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787793, Length=316, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37581; Mature: 37450

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPSETSPASPDVTFTNVGAARWWHRGVFASQTAYVTLALVALIIVMSFASPYFLTEGN
CCCCCCCCCCCCCEEEECCCHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEECCC
LQNVAKNFSFIAIATLGITFVIITGGIDLSVGSMMCLAAMITSMVMVTLSTPGTPLAALF
HHHHHHCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
VHLAADGKTVVANVPGLILLVSVLAGLAVSVLVGLINGMCIAILGLSPFVTTLGMLSIVR
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLCYVISNGRGSFPGGPDADYFYALTSGDVYGVPAPFIYLMVLALAMALVLHHSAFGRHV
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
FAIGGNEKAAELTGISVTRVKIEVYVIGAVAAGLQGIIISGWLGSAPANMATSYELNVIA
EEECCCCCCCEECCCEEEEEEEEEEEEEHHHHCCCCEEEECCCCCCCCCCCCCEEHHHHH
AAVIGGANLAGGLGGPLGAIVGCVLLEVIRNGLVLAQVNSYWQQTLVGVIIIAAVLVDRI
HHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RSRLL
HHHCC
>Mature Secondary Structure 
SVPSETSPASPDVTFTNVGAARWWHRGVFASQTAYVTLALVALIIVMSFASPYFLTEGN
CCCCCCCCCCCCEEEECCCHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEECCC
LQNVAKNFSFIAIATLGITFVIITGGIDLSVGSMMCLAAMITSMVMVTLSTPGTPLAALF
HHHHHHCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
VHLAADGKTVVANVPGLILLVSVLAGLAVSVLVGLINGMCIAILGLSPFVTTLGMLSIVR
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLCYVISNGRGSFPGGPDADYFYALTSGDVYGVPAPFIYLMVLALAMALVLHHSAFGRHV
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE
FAIGGNEKAAELTGISVTRVKIEVYVIGAVAAGLQGIIISGWLGSAPANMATSYELNVIA
EEECCCCCCCEECCCEEEEEEEEEEEEEHHHHCCCCEEEECCCCCCCCCCCCCEEHHHHH
AAVIGGANLAGGLGGPLGAIVGCVLLEVIRNGLVLAQVNSYWQQTLVGVIIIAAVLVDRI
HHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RSRLL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]