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The map label for this gene is ypfJ [H]

Identifier: 146339057

GI number: 146339057

Start: 2138421

End: 2139266

Strand: Direct

Name: ypfJ [H]

Synonym: BRADO2011

Alternate gene names: 146339057

Gene position: 2138421-2139266 (Clockwise)

Preceding gene: 146339055

Following gene: 146339058

Centisome position: 28.68

GC content: 67.73

Gene sequence:

>846_bases
ATGGGTCTGCCGATCGGCGGCGGCGGGCTCGGCATCGGCACGATCATCGTGCTCGGCCTGATCGGCTACGCCTTCGGCAT
CGACCCGCGCATCCTGATCGGCGGCGCCGAGATGATCAGCCATGGCGGCGCGCCGACCTATCAGACCGACCGCCGCTCGG
CGGGCAAGAGCGGCGCGCCGAAGGACGAGATGGGCGACATGATCGCCGGCGTGCTCGGCGAGATCGACGACCGCTGGAGC
GAGATCTTCCAGGCGTCAGGCCAGAGCTACACCGGGCCGAAGATCGTGCTGTTCCGCAACAGCACCAATGGCGGCCGCTG
CGGCATGGCGCAGTCGGCGATGGGGCCGTTCTATTGTCCGCCGGACAAGCAGATCTTCCTCGACACGGGATTCTTCCGTG
AGGTCGAGACCCGCTTCCGCGGGTGCTCCGGCAACGCCTGCAAGTTCACCGCGGCCTACATCATCGCGCATGAGGCAGGA
CATCACGTCCAGAACCTGCTCGGCATCCTGCCGCGGGTGACCCGCATGCAGCAGCAGGTCGGCAGCAAGGCCGAGGCCAA
CGCGCTGCAGGTCAAGGTCGAGCTGCAGGCCGACTGCCTGTCCGGCGTCTGGGTCAATCGCGAGGCCAAGAAGCGTCCGG
GCTTCATCGAGGAGGGCGACATCGATGCGGCGCTGACGACGGCGTCGGCGATCGGCGACGACACCCTGCAGCGCCAGGCG
ACCGGGCGCGTGGTGCCGGATTCGTTCACGCATGGCTCGGCCGCGCAGCGCAAGCGCTGGTTCATGACCGGCTACCAGCA
GGGCACGGTGCAGGCCTGCAATACGTTCGGCGCCAATTCGCTTTAG

Upstream 100 bases:

>100_bases
GCAAGGACAGTGAGGAAAGGCCGCCATGCGTTACGATGATTTCCGTCGCAGCGACGACATCGACGACCGTCGCGACGAAG
GCGGCGGGATGGGCGGCGGT

Downstream 100 bases:

>100_bases
GAGACGCGATCATGGCGATCGATGAGAGCAAGAGCTTCATCCCCCTCAACATCGCCGTGCTGACGGTGTCAGACACCCGA
TCGCTCGCCGACGACAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGLPIGGGGLGIGTIIVLGLIGYAFGIDPRILIGGAEMISHGGAPTYQTDRRSAGKSGAPKDEMGDMIAGVLGEIDDRWS
EIFQASGQSYTGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFLDTGFFREVETRFRGCSGNACKFTAAYIIAHEAG
HHVQNLLGILPRVTRMQQQVGSKAEANALQVKVELQADCLSGVWVNREAKKRPGFIEEGDIDAALTTASAIGDDTLQRQA
TGRVVPDSFTHGSAAQRKRWFMTGYQQGTVQACNTFGANSL

Sequences:

>Translated_281_residues
MGLPIGGGGLGIGTIIVLGLIGYAFGIDPRILIGGAEMISHGGAPTYQTDRRSAGKSGAPKDEMGDMIAGVLGEIDDRWS
EIFQASGQSYTGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFLDTGFFREVETRFRGCSGNACKFTAAYIIAHEAG
HHVQNLLGILPRVTRMQQQVGSKAEANALQVKVELQADCLSGVWVNREAKKRPGFIEEGDIDAALTTASAIGDDTLQRQA
TGRVVPDSFTHGSAAQRKRWFMTGYQQGTVQACNTFGANSL
>Mature_280_residues
GLPIGGGGLGIGTIIVLGLIGYAFGIDPRILIGGAEMISHGGAPTYQTDRRSAGKSGAPKDEMGDMIAGVLGEIDDRWSE
IFQASGQSYTGPKIVLFRNSTNGGRCGMAQSAMGPFYCPPDKQIFLDTGFFREVETRFRGCSGNACKFTAAYIIAHEAGH
HVQNLLGILPRVTRMQQQVGSKAEANALQVKVELQADCLSGVWVNREAKKRPGFIEEGDIDAALTTASAIGDDTLQRQAT
GRVVPDSFTHGSAAQRKRWFMTGYQQGTVQACNTFGANSL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=278, Percent_Identity=42.4460431654676, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 29952; Mature: 29821

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPIGGGGLGIGTIIVLGLIGYAFGIDPRILIGGAEMISHGGAPTYQTDRRSAGKSGAP
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCCHHHCCCCCCCC
KDEMGDMIAGVLGEIDDRWSEIFQASGQSYTGPKIVLFRNSTNGGRCGMAQSAMGPFYCP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCC
PDKQIFLDTGFFREVETRFRGCSGNACKFTAAYIIAHEAGHHVQNLLGILPRVTRMQQQV
CCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
GSKAEANALQVKVELQADCLSGVWVNREAKKRPGFIEEGDIDAALTTASAIGDDTLQRQA
CCCCCCCEEEEEEEEECHHHCCEEECCHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHH
TGRVVPDSFTHGSAAQRKRWFMTGYQQGTVQACNTFGANSL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
GLPIGGGGLGIGTIIVLGLIGYAFGIDPRILIGGAEMISHGGAPTYQTDRRSAGKSGAP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCCHHHCCCCCCCC
KDEMGDMIAGVLGEIDDRWSEIFQASGQSYTGPKIVLFRNSTNGGRCGMAQSAMGPFYCP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCC
PDKQIFLDTGFFREVETRFRGCSGNACKFTAAYIIAHEAGHHVQNLLGILPRVTRMQQQV
CCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
GSKAEANALQVKVELQADCLSGVWVNREAKKRPGFIEEGDIDAALTTASAIGDDTLQRQA
CCCCCCCEEEEEEEEECHHHCCEEECCHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHH
TGRVVPDSFTHGSAAQRKRWFMTGYQQGTVQACNTFGANSL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]