Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339016
Identifier: 146339016
GI number: 146339016
Start: 2092301
End: 2092954
Strand: Direct
Name: 146339016
Synonym: BRADO1965
Alternate gene names: NA
Gene position: 2092301-2092954 (Clockwise)
Preceding gene: 146339009
Following gene: 146339017
Centisome position: 28.06
GC content: 62.84
Gene sequence:
>654_bases ATGAAATCCTGCACCAATCATGCCAAGGCACAAGCAAACTCGGGACAAACCATGGCGAACCAAGGGCAGAGCACCGACCA GGGACTCGAGCGGCTGACATCGGCCGCAACACAGGCCGGCAACGCAGGCCGCGGCTTGCCGCCGGTGCATCTGTGGAATC CGCCATTCTGCGGCGATCTAGACATGCGAATCGCCGGTGATGGTAGCTGGTACTACTTGGGCACGCCAATCGGCCGGCCG GCGCTGGTGCGCCTGTTCTCCACCATTCTCAAGCGCGAGGGTGACCGCTATTTCCTCGTCACGCCCGTGGAGAAGGTCGG CATCCGCGTCGACGATGCGCCCTTCATGGCCGTAGAATTGCGGAAGGAGACCGATGCGCACGGCGTGAGGCTGCAGTTTC GCACCAATGTCGACGATTGGGTCGCCTGCGATGCCGAGCACCGGCTGCGCTTCGAACGCAGCGAGAGCGGTGGCCTCACG CCCTATCTTCATGTCCGGGCCGATCTCTGGGCCAAGGTGACCCGGGCGCTCTACTATGAGCTTGTTGACATGGGCGAGGA GCGGATGATCGATGGCGAGGTCATGTTCGGGGTGGAGTCGTCAGGCGCGTTCTTCCCCATGGCCAATGCAGACGAGGTGA GGGCGGCGCTTTGA
Upstream 100 bases:
>100_bases ATCCCCATATTATCGGCATTCCGGGGTATTGACGGCATCACGTTATGGCGACCTTACCTCAGCTGCACCGGCGCCAGGAA CTTTTGCACAGACGATCGCG
Downstream 100 bases:
>100_bases ACGAGCCCATGGTGGCGAGGAGTGCGACGGACCGGGTGAGTTCGGCCGAATTCTTCGCGCGTGGCCGGGAGCGGCTGCGC TTCGACGTGCCGCCCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKSCTNHAKAQANSGQTMANQGQSTDQGLERLTSAATQAGNAGRGLPPVHLWNPPFCGDLDMRIAGDGSWYYLGTPIGRP ALVRLFSTILKREGDRYFLVTPVEKVGIRVDDAPFMAVELRKETDAHGVRLQFRTNVDDWVACDAEHRLRFERSESGGLT PYLHVRADLWAKVTRALYYELVDMGEERMIDGEVMFGVESSGAFFPMANADEVRAAL
Sequences:
>Translated_217_residues MKSCTNHAKAQANSGQTMANQGQSTDQGLERLTSAATQAGNAGRGLPPVHLWNPPFCGDLDMRIAGDGSWYYLGTPIGRP ALVRLFSTILKREGDRYFLVTPVEKVGIRVDDAPFMAVELRKETDAHGVRLQFRTNVDDWVACDAEHRLRFERSESGGLT PYLHVRADLWAKVTRALYYELVDMGEERMIDGEVMFGVESSGAFFPMANADEVRAAL >Mature_217_residues MKSCTNHAKAQANSGQTMANQGQSTDQGLERLTSAATQAGNAGRGLPPVHLWNPPFCGDLDMRIAGDGSWYYLGTPIGRP ALVRLFSTILKREGDRYFLVTPVEKVGIRVDDAPFMAVELRKETDAHGVRLQFRTNVDDWVACDAEHRLRFERSESGGLT PYLHVRADLWAKVTRALYYELVDMGEERMIDGEVMFGVESSGAFFPMANADEVRAAL
Specific function: Unknown
COG id: COG3816
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24054; Mature: 24054
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSCTNHAKAQANSGQTMANQGQSTDQGLERLTSAATQAGNAGRGLPPVHLWNPPFCGDL CCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC DMRIAGDGSWYYLGTPIGRPALVRLFSTILKREGDRYFLVTPVEKVGIRVDDAPFMAVEL CEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHCEEECCCCEEEEEE RKETDAHGVRLQFRTNVDDWVACDAEHRLRFERSESGGLTPYLHVRADLWAKVTRALYYE ECCCCCCCEEEEEECCCCHHEEECHHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHH LVDMGEERMIDGEVMFGVESSGAFFPMANADEVRAAL HHHCCHHHEECCEEEEEECCCCCEEECCCHHHHHHCC >Mature Secondary Structure MKSCTNHAKAQANSGQTMANQGQSTDQGLERLTSAATQAGNAGRGLPPVHLWNPPFCGDL CCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC DMRIAGDGSWYYLGTPIGRPALVRLFSTILKREGDRYFLVTPVEKVGIRVDDAPFMAVEL CEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHCEEECCCCEEEEEE RKETDAHGVRLQFRTNVDDWVACDAEHRLRFERSESGGLTPYLHVRADLWAKVTRALYYE ECCCCCCCEEEEEECCCCHHEEECHHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHH LVDMGEERMIDGEVMFGVESSGAFFPMANADEVRAAL HHHCCHHHEECCEEEEEECCCCCEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA