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The map label for this gene is yurN [H]

Identifier: 146338967

GI number: 146338967

Start: 2036028

End: 2036933

Strand: Direct

Name: yurN [H]

Synonym: BRADO1911

Alternate gene names: 146338967

Gene position: 2036028-2036933 (Clockwise)

Preceding gene: 146338966

Following gene: 146338968

Centisome position: 27.31

GC content: 62.14

Gene sequence:

>906_bases
GTGATGGACAAGACCATCAACAACAAGGCCTGGTTCCTGGTGCTGCCGGTGTTCCTGCTAGTCGCGTTCTCGGCGATTCT
GCCGTTGATGACGGTGGTGAACTATTCGATGCAGGACACCTTCGGCAACAACCAGTTCTTCTGGAACGGCGTCGGCTGGT
TCAAGGAGCTGCTCGATCCCTCGACCGATCTCGGCGGCCGCTTCCTGGCCTCGCTCGGTCGCAACCTGATCTTCTCGCTC
GCGATCCTCGCCATCGAGGTGCCGCTCGGCATCGTCGTCGCGCTGTCGATGCCGCGGGCCGGATGGACGGTGGCGTTCTG
CCTCGTCGTGCTGGCGCTGCCGCTGCTCATTCCATGGAATGTGGTAGGTACCATCTGGCAGATCTTCGGCCGTTCCGACA
TCGGCCTGCTCGGCTACGTGCTCAACGCCGTCGGGGTCGACTACAACTACGTCTCCAACGACGCCGATGCCTGGTTCACC
GTCATCGTCATGGATGTCTGGCATTGGACCAGCCTAGTGGCGCTGCTGTGCTATGCCGGCCTGAAGTCGATTCCCGACGC
CTACTATCAGGCGGCGCAGATCGATGGCGCCTCGCGCTGGGCGGTGTTCACCGCGATCCAGCTGCCGAAGATGCACCGCG
TGCTCCTCATCGCCGTGCTGCTGCGCTTCATGGACAGCTTCATGATCTACACCGAGCCGTTTGTCGTGACTGGGGGCGGC
CCGGGCAATTCGACGACCTTCATCTCGATCGAGCTGGTCAAGATCGCGCTCGGCCAGTTCGATCTCGGCAAGGCAGCGGC
GTTGTCGCTGGTCTACAATCTGATCATCCTGATCGTCTGCTGGGTGTTCTACACTATCATGACCAATGCCGGCGCCGAGC
GCCGGCCGGTGGAAGGGGGCGCGTGA

Upstream 100 bases:

>100_bases
GCCGGCCGGCTTCTCGCCAGCAGGCTCGGCCGTCGGGTTGAGGTTCAACCCGGCCAATGTCCACGTCTATGCCGACAGCC
GTCTGGTCGAGGGAGCCTGA

Downstream 100 bases:

>100_bases
TGAACACTATTCCGGGCCGCCGGGTCATCATATCGCTGTTCCTGGTCTTCCTGCTGTTGCCGATCTACTGGCTCGTCAAC
ATGAGCTTCAAGACGAACAA

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MMDKTINNKAWFLVLPVFLLVAFSAILPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFLASLGRNLIFSL
AILAIEVPLGIVVALSMPRAGWTVAFCLVVLALPLLIPWNVVGTIWQIFGRSDIGLLGYVLNAVGVDYNYVSNDADAWFT
VIVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFTAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGG
PGNSTTFISIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTIMTNAGAERRPVEGGA

Sequences:

>Translated_301_residues
MMDKTINNKAWFLVLPVFLLVAFSAILPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFLASLGRNLIFSL
AILAIEVPLGIVVALSMPRAGWTVAFCLVVLALPLLIPWNVVGTIWQIFGRSDIGLLGYVLNAVGVDYNYVSNDADAWFT
VIVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFTAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGG
PGNSTTFISIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTIMTNAGAERRPVEGGA
>Mature_301_residues
MMDKTINNKAWFLVLPVFLLVAFSAILPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFLASLGRNLIFSL
AILAIEVPLGIVVALSMPRAGWTVAFCLVVLALPLLIPWNVVGTIWQIFGRSDIGLLGYVLNAVGVDYNYVSNDADAWFT
VIVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFTAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGG
PGNSTTFISIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTIMTNAGAERRPVEGGA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787570, Length=222, Percent_Identity=28.3783783783784, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33179; Mature: 33179

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKTINNKAWFLVLPVFLLVAFSAILPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCC
STDLGGRFLASLGRNLIFSLAILAIEVPLGIVVALSMPRAGWTVAFCLVVLALPLLIPWN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHH
VVGTIWQIFGRSDIGLLGYVLNAVGVDYNYVSNDADAWFTVIVMDVWHWTSLVALLCYAG
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKSIPDAYYQAAQIDGASRWAVFTAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGG
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCC
PGNSTTFISIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTIMTNAGAERRPVEGG
CCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
A
C
>Mature Secondary Structure
MMDKTINNKAWFLVLPVFLLVAFSAILPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCC
STDLGGRFLASLGRNLIFSLAILAIEVPLGIVVALSMPRAGWTVAFCLVVLALPLLIPWN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHH
VVGTIWQIFGRSDIGLLGYVLNAVGVDYNYVSNDADAWFTVIVMDVWHWTSLVALLCYAG
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKSIPDAYYQAAQIDGASRWAVFTAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGG
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCEEEECCC
PGNSTTFISIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTIMTNAGAERRPVEGG
CCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]