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The map label for this gene is ttuB [H]

Identifier: 146338956

GI number: 146338956

Start: 2022613

End: 2023944

Strand: Direct

Name: ttuB [H]

Synonym: BRADO1900

Alternate gene names: 146338956

Gene position: 2022613-2023944 (Clockwise)

Preceding gene: 146338954

Following gene: 146338957

Centisome position: 27.13

GC content: 65.77

Gene sequence:

>1332_bases
ATGAGTCCGTCCACCACCGTTCCGGCCGCGCCTGGCCGCTCCGACATCGAGGCTGCAACCATCCGCGCCATCTCCTGGCG
GCTGATTCCGTTTCTGGTGCTTGCCTATTTCTTCTCCTATCTCGACCGCGTCAATCTCGGCTTCGCCGCGCTGACGATGA
ACGCCGAGCTGAAATTCTCGCCGCTTGTGTTCGCCTGGGGCGCCGGCATTTTCTTCATCGGCTATTTCATCTTCGAGGTG
CCGAGCAATCTTGCCCTGGAGAAGTTCGGCGCCAGCCGCTGGATCGCGCGCATCATGGTGACCTGGGGCATCATCTCGGC
GTTGATGGCGCTGGTGTCGGGGCCGTGGAGCTTCTACGCGCTGCGCTTCCTGCTCGGTGTCGCCGAGGCCGGTTTCTTTC
CCGGCATCATCCTCTATCTGACCTATTGGTATCCGGCGCAGTATCGCGCGCGCTTTCTCGCCGCCTTCGCGGTGGCGGTG
CCGATCTCCACCGTGATCGGCGCGCCGGTCTCAGGCCTGCTGCTCGGCATGCACGGCCTGATGGGGCTGCAGGGCTGGCA
GTGGCTGTTCATCATCGAGGGCATCCCCTCGATCATCCTGGGCGTCGTCACCTGGTTCTATCTGACCGACCGGCCGGAGC
ATGCGACCTGGCTCGCGCCAGAGCAGAAGGCCTGGCTCGCCGCCAAGCTCGAGGCCGAGACCGCGGCGAAGCAGGCCGCG
GGACACATGACGCTCGGCGAGGCGCTGTCGTCGCCGAAGGTGATCGTGCTCAGCCTGATCTATTTCGGCTTCGTCGGCGC
GCTCTATGGCATGCAGTTCTGGCTGCCGCAGATCGTCAAGGCGTTCGGCCTCAGCAACACCCAGACCGGCTTCGTCACCG
CGATTCCCTATGCGTTCGGCACCGTCGCGATGATCCTGTGGGCGCGGCATTCCGATGCGACGCGCGAGCGCGTCGTGCAT
GTCGGCGCGCCGCTGATCCTGATCGCGGTGGCGCTTGCTGCGTCGAGCCAGATCGGCGATCCGACCTTGACGATGGTGGC
GCTGACATTCGCGGCGATCGGCGTGTTCTGCGTGTTCGGCGTGTTCTGGACGTTGCCGACGGCGTGGCTGTCCGGCACGG
CCGCCGCCGGTGCCATCGCGCTGATCAACTCGATCGGCAATCTCGCCGGCTTCGGCGGGCCCTATCTGGTCGGCTGGATC
AAGGATACGACCGGCTCCACCACGCACGGCCTGCTCGCGCTGTCGGTGCTGCCGCTGATCGCGGGTCTCCTGGTGTTCTT
CGGCGGCCATGAGAGCAAGGCGGAGTTCGCCGGCCAGGCACCGGCGGAGTGA

Upstream 100 bases:

>100_bases
ACGAACTGTGGGATGTCGGGTTTTCCGATTGACTTGCCATCACCGATGCTCAACACCCGCCTCAACTACCAATCCTGCAA
TGCTCCCCGGGAGGAGATCA

Downstream 100 bases:

>100_bases
GCGCGGTGATCCGCAGTTGCGGTGCCCAGCGTGGTTGCTGGACCTGCTCATGTCATTCCGGGGCGGTCGCACCAGCGAGC
TAACCCGGAATCTCGAGATG

Product: MFS family tartrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSPSTTVPAAPGRSDIEAATIRAISWRLIPFLVLAYFFSYLDRVNLGFAALTMNAELKFSPLVFAWGAGIFFIGYFIFEV
PSNLALEKFGASRWIARIMVTWGIISALMALVSGPWSFYALRFLLGVAEAGFFPGIILYLTYWYPAQYRARFLAAFAVAV
PISTVIGAPVSGLLLGMHGLMGLQGWQWLFIIEGIPSIILGVVTWFYLTDRPEHATWLAPEQKAWLAAKLEAETAAKQAA
GHMTLGEALSSPKVIVLSLIYFGFVGALYGMQFWLPQIVKAFGLSNTQTGFVTAIPYAFGTVAMILWARHSDATRERVVH
VGAPLILIAVALAASSQIGDPTLTMVALTFAAIGVFCVFGVFWTLPTAWLSGTAAAGAIALINSIGNLAGFGGPYLVGWI
KDTTGSTTHGLLALSVLPLIAGLLVFFGGHESKAEFAGQAPAE

Sequences:

>Translated_443_residues
MSPSTTVPAAPGRSDIEAATIRAISWRLIPFLVLAYFFSYLDRVNLGFAALTMNAELKFSPLVFAWGAGIFFIGYFIFEV
PSNLALEKFGASRWIARIMVTWGIISALMALVSGPWSFYALRFLLGVAEAGFFPGIILYLTYWYPAQYRARFLAAFAVAV
PISTVIGAPVSGLLLGMHGLMGLQGWQWLFIIEGIPSIILGVVTWFYLTDRPEHATWLAPEQKAWLAAKLEAETAAKQAA
GHMTLGEALSSPKVIVLSLIYFGFVGALYGMQFWLPQIVKAFGLSNTQTGFVTAIPYAFGTVAMILWARHSDATRERVVH
VGAPLILIAVALAASSQIGDPTLTMVALTFAAIGVFCVFGVFWTLPTAWLSGTAAAGAIALINSIGNLAGFGGPYLVGWI
KDTTGSTTHGLLALSVLPLIAGLLVFFGGHESKAEFAGQAPAE
>Mature_442_residues
SPSTTVPAAPGRSDIEAATIRAISWRLIPFLVLAYFFSYLDRVNLGFAALTMNAELKFSPLVFAWGAGIFFIGYFIFEVP
SNLALEKFGASRWIARIMVTWGIISALMALVSGPWSFYALRFLLGVAEAGFFPGIILYLTYWYPAQYRARFLAAFAVAVP
ISTVIGAPVSGLLLGMHGLMGLQGWQWLFIIEGIPSIILGVVTWFYLTDRPEHATWLAPEQKAWLAAKLEAETAAKQAAG
HMTLGEALSSPKVIVLSLIYFGFVGALYGMQFWLPQIVKAFGLSNTQTGFVTAIPYAFGTVAMILWARHSDATRERVVHV
GAPLILIAVALAASSQIGDPTLTMVALTFAAIGVFCVFGVFWTLPTAWLSGTAAAGAIALINSIGNLAGFGGPYLVGWIK
DTTGSTTHGLLALSVLPLIAGLLVFFGGHESKAEFAGQAPAE

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=412, Percent_Identity=39.5631067961165, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI2367379, Length=420, Percent_Identity=24.2857142857143, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1789152, Length=444, Percent_Identity=24.7747747747748, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789515, Length=431, Percent_Identity=23.6658932714617, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI2367193, Length=289, Percent_Identity=23.8754325259516, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115534558, Length=249, Percent_Identity=26.9076305220884, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=201, Percent_Identity=32.3383084577114, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321698, Length=354, Percent_Identity=24.8587570621469, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6324410, Length=159, Percent_Identity=27.0440251572327, Blast_Score=78, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323032, Length=252, Percent_Identity=23.8095238095238, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322612, Length=228, Percent_Identity=25, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319876, Length=222, Percent_Identity=25.6756756756757, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19922400, Length=372, Percent_Identity=26.3440860215054, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654215, Length=372, Percent_Identity=26.3440860215054, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24584153, Length=342, Percent_Identity=24.5614035087719, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47517; Mature: 47386

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSTTVPAAPGRSDIEAATIRAISWRLIPFLVLAYFFSYLDRVNLGFAALTMNAELKFS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEC
PLVFAWGAGIFFIGYFIFEVPSNLALEKFGASRWIARIMVTWGIISALMALVSGPWSFYA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LRFLLGVAEAGFFPGIILYLTYWYPAQYRARFLAAFAVAVPISTVIGAPVSGLLLGMHGL
HHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MGLQGWQWLFIIEGIPSIILGVVTWFYLTDRPEHATWLAPEQKAWLAAKLEAETAAKQAA
HCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC
GHMTLGEALSSPKVIVLSLIYFGFVGALYGMQFWLPQIVKAFGLSNTQTGFVTAIPYAFG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
TVAMILWARHSDATRERVVHVGAPLILIAVALAASSQIGDPTLTMVALTFAAIGVFCVFG
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VFWTLPTAWLSGTAAAGAIALINSIGNLAGFGGPYLVGWIKDTTGSTTHGLLALSVLPLI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
AGLLVFFGGHESKAEFAGQAPAE
HHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
SPSTTVPAAPGRSDIEAATIRAISWRLIPFLVLAYFFSYLDRVNLGFAALTMNAELKFS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEC
PLVFAWGAGIFFIGYFIFEVPSNLALEKFGASRWIARIMVTWGIISALMALVSGPWSFYA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LRFLLGVAEAGFFPGIILYLTYWYPAQYRARFLAAFAVAVPISTVIGAPVSGLLLGMHGL
HHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MGLQGWQWLFIIEGIPSIILGVVTWFYLTDRPEHATWLAPEQKAWLAAKLEAETAAKQAA
HCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC
GHMTLGEALSSPKVIVLSLIYFGFVGALYGMQFWLPQIVKAFGLSNTQTGFVTAIPYAFG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
TVAMILWARHSDATRERVVHVGAPLILIAVALAASSQIGDPTLTMVALTFAAIGVFCVFG
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VFWTLPTAWLSGTAAAGAIALINSIGNLAGFGGPYLVGWIKDTTGSTTHGLLALSVLPLI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
AGLLVFFGGHESKAEFAGQAPAE
HHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]