| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is zraS [C]
Identifier: 146338949
GI number: 146338949
Start: 2015632
End: 2017230
Strand: Direct
Name: zraS [C]
Synonym: BRADO1892
Alternate gene names: 146338949
Gene position: 2015632-2017230 (Clockwise)
Preceding gene: 146338948
Following gene: 146338951
Centisome position: 27.03
GC content: 65.42
Gene sequence:
>1599_bases ATGTTGGGATGGTTTGAGCGGCTGCTCGATTCGTCGACCTTGTCTCCGCACGGCATCTGTCTGTTGTGGGAACCCGAGCT GATCTGGCTCCATGTCGCCTCCGACGCCGTGATCGCGGCAGCCTATTTCTCCATCCCTGTGGTGCTCACGCTGTTCGTCT CCAAGCGGCGGGAAGTTGACTTCGGGTTCCTGTTCTGGGCCTTTGCGATCTTCATCATGGCCTGCGGCGTCACCCATGTG CTGTCGATCGTCACGTTGTGGGTTCCGATCTATGGCATCGAAGGCCTGGTCAAGGCGGCGACCGCGCTGGCGTCGATCCT GACCGCGGGCATTCTCTGGCCGCTGCTGCCGAAGATCCTGGCGATCCCGTCACCCGCACAATTGCGGGCGGCGGAGGCCG CGCTCGTTGTCGAGAGCCGGCAACGCCGCGAGGCCGAGGACATGCTGCGCCACGCTCAGAAGATGGAAGCCGTCGGTCAG CTGACCGGCGGCGTGGCGCATGACTTCAACAATCTGCTGACCATCATCAGCGGCAATCTCGAGATCGCCGAGCGCAGCCT GCGCGCGCAGGGCGAGGCCGCGCGCGACCGCCTGACGCGGGCGATCGCGCAGGCCGCCAGCGGCGCGCAGCGCGCGGCGA CGCTGACCCAGCGTCTGCTCGCCTTCGCGCGCCGCCAGCCGCTCGATCCGCGGCTGACCAATGTCAACAAGCTGCTCTCG GGCATGTCCGACTTCTTCCGCAGAACCTTGGGAGAGACGATCAGCGTCGAGGTGGTCGAGGCTGCGGGGCTCTGGCAAGT CGAGGTCGATCCGAGCCAGATGGAGGCCGCGATTCTCAATCTCGTCGTCAACGCCAAGGACGCCATGCAGGGGCAGGGCA AGCTGACGATCGAGACATCGAACAGCTTCATCGACGAGGGCTATGCGCGGCAGCACGCCGACGTCCGGGTCGGCCAATAC GTCCTGATCGCGATCACCGACACCGGTGTCGGCATGTCGCGCGACGTCGTTGAGAAGGCGTTCGATCCGTTCTTCACCAC GAAGGAGCCGGGGCAGGGAACGGGCCTGGGACTGAGCCAGGTCTATGGCTTCGTCAAGCAGTCCGGCGGCCATGTGAACA TCTACAGCGAAGTCGGAGAGGGCACGACCGTGAAGATTTATCTGCCGCGCGCGCATCAGGCCACAGCCGATGCGCCGGAG AGCCGGAGCGCCGTGGTCGGCAGCCGCGGCAGCGAGACCGTGCTCATCGTCGAGGACGAGCCGGAGGTGCGCAGCTATAT CGCCGAGACGCTGTCCGAACTGGGCTATGCCGTGCGTGAGGCGCCCGACGGGCCGGCGGCGCTGGCGCTGCTCTCGCGCG AATCACTCGATGTCGATCTCCTGCTCACCGACATCGTCATGCCCGGCATGAACGGTCGCCAGCTCGCCGATGATCTGCGC AACAGCCGTCCGAAGCTCAAGGTGCTGTTCATGACCGGCTATTCGCGCAACGCTATCGTCCATCAGGGACGGCTGGATCC CGGCGTTGCGCTGCTGCAGAAGCCGCTCAGCCGAACGATGCTGAGCAGCAAGATCCGCGAGGTGCTGGACGCGCCGTAG
Upstream 100 bases:
>100_bases CGTGAGTTCCCTGAGGTTCCATTTGTCTGTTGCTTGACGAGAGGATCGCTCGCCGCCAGTTTCGCCTCGCTTCGAAACGA AGTTGGGGGAGCACGACTCG
Downstream 100 bases:
>100_bases AGCACGCTCCGGAAAAGGAGACGCCGGTTTTCCGGACGCATCATGCGCACGAAAACAGTCGGATCATGATGCGCTGCCGT GGCGGCGCATCATGACCGAC
Product: sensor histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MLGWFERLLDSSTLSPHGICLLWEPELIWLHVASDAVIAAAYFSIPVVLTLFVSKRREVDFGFLFWAFAIFIMACGVTHV LSIVTLWVPIYGIEGLVKAATALASILTAGILWPLLPKILAIPSPAQLRAAEAALVVESRQRREAEDMLRHAQKMEAVGQ LTGGVAHDFNNLLTIISGNLEIAERSLRAQGEAARDRLTRAIAQAASGAQRAATLTQRLLAFARRQPLDPRLTNVNKLLS GMSDFFRRTLGETISVEVVEAAGLWQVEVDPSQMEAAILNLVVNAKDAMQGQGKLTIETSNSFIDEGYARQHADVRVGQY VLIAITDTGVGMSRDVVEKAFDPFFTTKEPGQGTGLGLSQVYGFVKQSGGHVNIYSEVGEGTTVKIYLPRAHQATADAPE SRSAVVGSRGSETVLIVEDEPEVRSYIAETLSELGYAVREAPDGPAALALLSRESLDVDLLLTDIVMPGMNGRQLADDLR NSRPKLKVLFMTGYSRNAIVHQGRLDPGVALLQKPLSRTMLSSKIREVLDAP
Sequences:
>Translated_532_residues MLGWFERLLDSSTLSPHGICLLWEPELIWLHVASDAVIAAAYFSIPVVLTLFVSKRREVDFGFLFWAFAIFIMACGVTHV LSIVTLWVPIYGIEGLVKAATALASILTAGILWPLLPKILAIPSPAQLRAAEAALVVESRQRREAEDMLRHAQKMEAVGQ LTGGVAHDFNNLLTIISGNLEIAERSLRAQGEAARDRLTRAIAQAASGAQRAATLTQRLLAFARRQPLDPRLTNVNKLLS GMSDFFRRTLGETISVEVVEAAGLWQVEVDPSQMEAAILNLVVNAKDAMQGQGKLTIETSNSFIDEGYARQHADVRVGQY VLIAITDTGVGMSRDVVEKAFDPFFTTKEPGQGTGLGLSQVYGFVKQSGGHVNIYSEVGEGTTVKIYLPRAHQATADAPE SRSAVVGSRGSETVLIVEDEPEVRSYIAETLSELGYAVREAPDGPAALALLSRESLDVDLLLTDIVMPGMNGRQLADDLR NSRPKLKVLFMTGYSRNAIVHQGRLDPGVALLQKPLSRTMLSSKIREVLDAP >Mature_532_residues MLGWFERLLDSSTLSPHGICLLWEPELIWLHVASDAVIAAAYFSIPVVLTLFVSKRREVDFGFLFWAFAIFIMACGVTHV LSIVTLWVPIYGIEGLVKAATALASILTAGILWPLLPKILAIPSPAQLRAAEAALVVESRQRREAEDMLRHAQKMEAVGQ LTGGVAHDFNNLLTIISGNLEIAERSLRAQGEAARDRLTRAIAQAASGAQRAATLTQRLLAFARRQPLDPRLTNVNKLLS GMSDFFRRTLGETISVEVVEAAGLWQVEVDPSQMEAAILNLVVNAKDAMQGQGKLTIETSNSFIDEGYARQHADVRVGQY VLIAITDTGVGMSRDVVEKAFDPFFTTKEPGQGTGLGLSQVYGFVKQSGGHVNIYSEVGEGTTVKIYLPRAHQATADAPE SRSAVVGSRGSETVLIVEDEPEVRSYIAETLSELGYAVREAPDGPAALALLSRESLDVDLLLTDIVMPGMNGRQLADDLR NSRPKLKVLFMTGYSRNAIVHQGRLDPGVALLQKPLSRTMLSSKIREVLDAP
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=251, Percent_Identity=28.6852589641434, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788713, Length=387, Percent_Identity=26.3565891472868, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=28.1746031746032, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI48994928, Length=276, Percent_Identity=27.8985507246377, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57847; Mature: 57847
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGWFERLLDSSTLSPHGICLLWEPELIWLHVASDAVIAAAYFSIPVVLTLFVSKRREVD CCHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC FGFLFWAFAIFIMACGVTHVLSIVTLWVPIYGIEGLVKAATALASILTAGILWPLLPKIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPSPAQLRAAEAALVVESRQRREAEDMLRHAQKMEAVGQLTGGVAHDFNNLLTIISGNL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCH EIAERSLRAQGEAARDRLTRAIAQAASGAQRAATLTQRLLAFARRQPLDPRLTNVNKLLS HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GMSDFFRRTLGETISVEVVEAAGLWQVEVDPSQMEAAILNLVVNAKDAMQGQGKLTIETS HHHHHHHHHHCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHCCHHHHCCCCEEEEEEC NSFIDEGYARQHADVRVGQYVLIAITDTGVGMSRDVVEKAFDPFFTTKEPGQGTGLGLSQ CCHHHCCHHHHCCCEEECCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH VYGFVKQSGGHVNIYSEVGEGTTVKIYLPRAHQATADAPESRSAVVGSRGSETVLIVEDE HHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCEEEEECCC PEVRSYIAETLSELGYAVREAPDGPAALALLSRESLDVDLLLTDIVMPGMNGRQLADDLR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH NSRPKLKVLFMTGYSRNAIVHQGRLDPGVALLQKPLSRTMLSSKIREVLDAP CCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLGWFERLLDSSTLSPHGICLLWEPELIWLHVASDAVIAAAYFSIPVVLTLFVSKRREVD CCHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC FGFLFWAFAIFIMACGVTHVLSIVTLWVPIYGIEGLVKAATALASILTAGILWPLLPKIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPSPAQLRAAEAALVVESRQRREAEDMLRHAQKMEAVGQLTGGVAHDFNNLLTIISGNL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEECCH EIAERSLRAQGEAARDRLTRAIAQAASGAQRAATLTQRLLAFARRQPLDPRLTNVNKLLS HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GMSDFFRRTLGETISVEVVEAAGLWQVEVDPSQMEAAILNLVVNAKDAMQGQGKLTIETS HHHHHHHHHHCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHCCHHHHCCCCEEEEEEC NSFIDEGYARQHADVRVGQYVLIAITDTGVGMSRDVVEKAFDPFFTTKEPGQGTGLGLSQ CCHHHCCHHHHCCCEEECCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH VYGFVKQSGGHVNIYSEVGEGTTVKIYLPRAHQATADAPESRSAVVGSRGSETVLIVEDE HHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCEEEEECCC PEVRSYIAETLSELGYAVREAPDGPAALALLSRESLDVDLLLTDIVMPGMNGRQLADDLR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH NSRPKLKVLFMTGYSRNAIVHQGRLDPGVALLQKPLSRTMLSSKIREVLDAP CCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA