| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338920
Identifier: 146338920
GI number: 146338920
Start: 1984383
End: 1985396
Strand: Direct
Name: 146338920
Synonym: BRADO1860
Alternate gene names: NA
Gene position: 1984383-1985396 (Clockwise)
Preceding gene: 146338918
Following gene: 146338921
Centisome position: 26.61
GC content: 66.47
Gene sequence:
>1014_bases ATGACGAGCGGCAGGGGGAGCGCCCATCTTTTCGCGCGGCGGGCGGCCTTCGTCCTGCTCGCATTTGCAATCCTGACCGG CCACGGCGTCGAAGCCGCCTTCAACTACGCGCGTTATCAGGAGACCAGTCTCGACGATCTCCTGGCACTGCCGCGCCCGG CCAATGGTGTCGACATCAAGGCCGGCGCGCCGCTCAAGCTCGACGTCATCCTGGTGAATGCGGATGGCCCTTGTGCGACC GGGTTCCTGAGGCGAGCCATGACGATGACGGGCTTCGACCCGACCGGGGCGATCGGCATCTCGAACTGCATCACGGTGCG CTCGGCCAAGGGGAAGCAGCTCAAGGTGTTCGTCCAGGACATCGTCTATGGCTTCCTGCCGCGCGAGGTGCCGGTCGGCG GCAAGCTGACGCTCTATGCCGTCCACCTCTACACCTCGGCCGACGGACCCGGGCTGCTGGTCAACGAATTCCAGACGGCG CAGCCTTCCGCGCAGCCCTCCGGCAAACCGCCGTCCGAGACCGCGATGGCCTCATGCGGCTGCTGGGCGCTGCGCGATCA TCCGGGCATCGACGTCGATGCCGGCAAGGAGGGAGCACCGATCGCGGTGATCGAGGAGGGCGTGGTCGTCAAGCTGGAAC CTGCCGATCAGGCCCCCGCCGATCTGCCGGTCATCGGCGGCTGCGGCCGCTACGTCGTGCTGAAGCACACTTATCCCAAT GGCGCCGTCCTCTTTACCCGCTATGTCCATCTCGGCCGTCTCGCCGATGCCACGGGCCAGCCGCCGGCCGTAGGCGCGCG CTTCAAGCGCGGCGAGAAGATCGCGGAAGCCGGACCGGACAGGATCGTGCATTTCGAGCTGCGCCCGGTCGCGCTCGGCA ACACGACGGCGGATGCGGCGTGGGTTAAGCAATATGACGGGATTGCCGACATGGAATGGTCGCGCTACGAGCCGGTGGAT CCGAAGAAGTTCGATCCCGACGCCTTTGGCGGTCTGGGCAAGCGTGGGAAGTAG
Upstream 100 bases:
>100_bases GTTTGCAGCGGCCGGTTCCACCGTCCCGCAGAGGTTGTGGATTTTGCGCCGCTGTCGTGTAGGCTTCGCCGACGGGGATG GATCGGAGTGGGAATCGGGA
Downstream 100 bases:
>100_bases GCGTCGAGATGTTGGAGACCGTGGGCCGTCATCGAGCGGCGCTTGTCGGAATGATCGCGGCGATGCTCGCGGGATCGCTC GCCCCATCGGCGCACGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTSGRGSAHLFARRAAFVLLAFAILTGHGVEAAFNYARYQETSLDDLLALPRPANGVDIKAGAPLKLDVILVNADGPCAT GFLRRAMTMTGFDPTGAIGISNCITVRSAKGKQLKVFVQDIVYGFLPREVPVGGKLTLYAVHLYTSADGPGLLVNEFQTA QPSAQPSGKPPSETAMASCGCWALRDHPGIDVDAGKEGAPIAVIEEGVVVKLEPADQAPADLPVIGGCGRYVVLKHTYPN GAVLFTRYVHLGRLADATGQPPAVGARFKRGEKIAEAGPDRIVHFELRPVALGNTTADAAWVKQYDGIADMEWSRYEPVD PKKFDPDAFGGLGKRGK
Sequences:
>Translated_337_residues MTSGRGSAHLFARRAAFVLLAFAILTGHGVEAAFNYARYQETSLDDLLALPRPANGVDIKAGAPLKLDVILVNADGPCAT GFLRRAMTMTGFDPTGAIGISNCITVRSAKGKQLKVFVQDIVYGFLPREVPVGGKLTLYAVHLYTSADGPGLLVNEFQTA QPSAQPSGKPPSETAMASCGCWALRDHPGIDVDAGKEGAPIAVIEEGVVVKLEPADQAPADLPVIGGCGRYVVLKHTYPN GAVLFTRYVHLGRLADATGQPPAVGARFKRGEKIAEAGPDRIVHFELRPVALGNTTADAAWVKQYDGIADMEWSRYEPVD PKKFDPDAFGGLGKRGK >Mature_336_residues TSGRGSAHLFARRAAFVLLAFAILTGHGVEAAFNYARYQETSLDDLLALPRPANGVDIKAGAPLKLDVILVNADGPCATG FLRRAMTMTGFDPTGAIGISNCITVRSAKGKQLKVFVQDIVYGFLPREVPVGGKLTLYAVHLYTSADGPGLLVNEFQTAQ PSAQPSGKPPSETAMASCGCWALRDHPGIDVDAGKEGAPIAVIEEGVVVKLEPADQAPADLPVIGGCGRYVVLKHTYPNG AVLFTRYVHLGRLADATGQPPAVGARFKRGEKIAEAGPDRIVHFELRPVALGNTTADAAWVKQYDGIADMEWSRYEPVDP KKFDPDAFGGLGKRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35765; Mature: 35634
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGRGSAHLFARRAAFVLLAFAILTGHGVEAAFNYARYQETSLDDLLALPRPANGVDIK CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEE AGAPLKLDVILVNADGPCATGFLRRAMTMTGFDPTGAIGISNCITVRSAKGKQLKVFVQD CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEHHHHH IVYGFLPREVPVGGKLTLYAVHLYTSADGPGLLVNEFQTAQPSAQPSGKPPSETAMASCG HHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCC CWALRDHPGIDVDAGKEGAPIAVIEEGVVVKLEPADQAPADLPVIGGCGRYVVLKHTYPN EEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCEECCCCCEEEEEEECCC GAVLFTRYVHLGRLADATGQPPAVGARFKRGEKIAEAGPDRIVHFELRPVALGNTTADAA CEEEEEHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCEEEEEEEEEEEECCCCCCHH WVKQYDGIADMEWSRYEPVDPKKFDPDAFGGLGKRGK HHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure TSGRGSAHLFARRAAFVLLAFAILTGHGVEAAFNYARYQETSLDDLLALPRPANGVDIK CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEE AGAPLKLDVILVNADGPCATGFLRRAMTMTGFDPTGAIGISNCITVRSAKGKQLKVFVQD CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEHHHHH IVYGFLPREVPVGGKLTLYAVHLYTSADGPGLLVNEFQTAQPSAQPSGKPPSETAMASCG HHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCC CWALRDHPGIDVDAGKEGAPIAVIEEGVVVKLEPADQAPADLPVIGGCGRYVVLKHTYPN EEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCEECCCCCEEEEEEECCC GAVLFTRYVHLGRLADATGQPPAVGARFKRGEKIAEAGPDRIVHFELRPVALGNTTADAA CEEEEEHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCEEEEEEEEEEEECCCCCCHH WVKQYDGIADMEWSRYEPVDPKKFDPDAFGGLGKRGK HHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA