| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338909
Identifier: 146338909
GI number: 146338909
Start: 1973896
End: 1975539
Strand: Reverse
Name: 146338909
Synonym: BRADO1849
Alternate gene names: NA
Gene position: 1975539-1973896 (Counterclockwise)
Preceding gene: 146338910
Following gene: 146338908
Centisome position: 26.49
GC content: 67.34
Gene sequence:
>1644_bases ATGTCCGTGTCATCGTCCCGCGCGGCCGCGGCGCCGGCCCCCACCGACATCGCGCTCGCTTATCACGCCCGCACCAAGCA CAGCCTGAAGCGCTATGCAGCCGGTCCGGAAACGCTCGACTGGGACGCCCAGCCCAATCCGTTCCGCGAGTTCGCAGGCT GCGCGCGCACCGACCTGCCGCTGACCTCTGATGATCTGATGGCGAGCTTTGCCGAGGTCTGCCAAGACACGGCCCCGGCC CGACCGCTCACCGTCGACGGCGTCGCGCTGCTGCTCGAACTGTCGTTCGGGCTGGCGGCGTGGAAGGAGTACGGCCCCGA TCGCTGGGCGCTGCGCTGCAATCCTTCGAGCGGCAATCTGCATCCGACCGAGGCCTATGTGATCGCCGAGAACGTCCCCG GCCTCGGCGACGGATTGCATCATTACGTCAGCCGCGACCACGTGCTGGAGCAGCGCTGCCGGCGCGGCATGAGGTCAGCT GGCGAGCCGCGGCTGTGGCTCGGCCTGTCCTCGATCCATTGGCGTGAGGCGTGGAAATATGGCGAGCGCGCGTTCCGCTA CTGTCAGCTCGATCTCGGCCATGCGCTCGGCGCCATCAGCTACGCGGCAGCCGCACTCGGCTGGACGACGCATGTGATCG ACGGTGTCGATCCGACGCGGCTCGCGGACATGCTGGGCCTCGATCGCGCCAGCGATTTCGAAGGCGTCGAGGCCGAGGAT CCCGACGTTCTGGTCGCCATCACGCCGCGTCGTCCTCATCAGCCGGTACATTCCGATCGGCCGCCGCTTTGGACGATTGG GGACATCTGGACGGGCGTTGCGAACCGGCTCGACCGGCATCCGCTGTATCGCTGGCCAGTCATTCCCGAGGTCAGCGCAG CCACGACCGGGACAGCGCTGCACGAACTGACGACTGCCCTGCTCCTTCCCCGGCGCGCATCGGGATCAACGGCGCGCGCG GCTGAGCTCATTCTGGGCCGTCGGAGCGCGCAGCGGTTCGACACGAAGTTCACCATGACGGCCGACGTTTTGCTCCAGTT GCTCGATGCGCTGCTGCCGCGAGCCACGCCGCCCTGGAATGGCTGGCCTTTCGCGGCGCGGGTGCATCCGCTGCTGTTCG TTCATCGCGTCGACGGGCTCACGCCCGGGCTTTACGCGCTGCCCCGCAGCCCAGACGCGGAGACCGGCCTGCGGCGCGCG TTGCGCTCCGATTTCGATTGGCAACGCGTCGCGCGCGCACCGGATCATCTGCCGCTGTTTCATCTCTTGCCCACAGACAG CCGCGGCGTCATCCGCACCGCGAGCTGTCACCAGGCGATCGCCGGCGACAGCTGCTTCGCCGTGGCGATGCTCGCCGAAT TCCAGGCGCTCGTCGGCGACAATTCCTGGCGCTATCGCCAGCTGCATTGGGAGGCAGGCCTGATCGGTCACGCTCTGTAT CTGGAGGCCGAAGCGGCGGGCCTGCGCGGCACCGGCATCGGCTGCTATTTCGACGACTCCGTGCACGAGATGCTTGGCGT CGCCGGAGATCAGTTTCAGTCACTCTATCACTTCACGGTCGGCCGTCCCCTCACCGACAATCGGATCACGACGCTGCAAG CCTATCCCGGGCGCACACGCAACGAAGCAGGAGTCTCGCCATGA
Upstream 100 bases:
>100_bases AGATCGCGCCGCACACCCGGAACGGAATTTGCTCGGCATGACCCGGTCGTTGATTGACCAGCCAACATGCGCGAACGCAG TCCGCGCCTTGTGAGGAAGC
Downstream 100 bases:
>100_bases GACGGCGTATTCCATTCCAGCGCATCGATGTCGGGCACGCGGCGGAGCTCTTGCAGCGCGACGATGTGCTGCGCTTCGAT GTCCGCGACCAGGCCTCGTT
Product: putative oxidoreductase
Products: NA
Alternate protein names: SagB-Type Dehydrogenase Domain-Containing Protein; Oxidoreductase; Rhodanese Domain-Containing Protein; SagB-Type Dehydrogenase Domain Protein; McbC-Like_oxidoreductase
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MSVSSSRAAAAPAPTDIALAYHARTKHSLKRYAAGPETLDWDAQPNPFREFAGCARTDLPLTSDDLMASFAEVCQDTAPA RPLTVDGVALLLELSFGLAAWKEYGPDRWALRCNPSSGNLHPTEAYVIAENVPGLGDGLHHYVSRDHVLEQRCRRGMRSA GEPRLWLGLSSIHWREAWKYGERAFRYCQLDLGHALGAISYAAAALGWTTHVIDGVDPTRLADMLGLDRASDFEGVEAED PDVLVAITPRRPHQPVHSDRPPLWTIGDIWTGVANRLDRHPLYRWPVIPEVSAATTGTALHELTTALLLPRRASGSTARA AELILGRRSAQRFDTKFTMTADVLLQLLDALLPRATPPWNGWPFAARVHPLLFVHRVDGLTPGLYALPRSPDAETGLRRA LRSDFDWQRVARAPDHLPLFHLLPTDSRGVIRTASCHQAIAGDSCFAVAMLAEFQALVGDNSWRYRQLHWEAGLIGHALY LEAEAAGLRGTGIGCYFDDSVHEMLGVAGDQFQSLYHFTVGRPLTDNRITTLQAYPGRTRNEAGVSP
Sequences:
>Translated_547_residues MSVSSSRAAAAPAPTDIALAYHARTKHSLKRYAAGPETLDWDAQPNPFREFAGCARTDLPLTSDDLMASFAEVCQDTAPA RPLTVDGVALLLELSFGLAAWKEYGPDRWALRCNPSSGNLHPTEAYVIAENVPGLGDGLHHYVSRDHVLEQRCRRGMRSA GEPRLWLGLSSIHWREAWKYGERAFRYCQLDLGHALGAISYAAAALGWTTHVIDGVDPTRLADMLGLDRASDFEGVEAED PDVLVAITPRRPHQPVHSDRPPLWTIGDIWTGVANRLDRHPLYRWPVIPEVSAATTGTALHELTTALLLPRRASGSTARA AELILGRRSAQRFDTKFTMTADVLLQLLDALLPRATPPWNGWPFAARVHPLLFVHRVDGLTPGLYALPRSPDAETGLRRA LRSDFDWQRVARAPDHLPLFHLLPTDSRGVIRTASCHQAIAGDSCFAVAMLAEFQALVGDNSWRYRQLHWEAGLIGHALY LEAEAAGLRGTGIGCYFDDSVHEMLGVAGDQFQSLYHFTVGRPLTDNRITTLQAYPGRTRNEAGVSP >Mature_546_residues SVSSSRAAAAPAPTDIALAYHARTKHSLKRYAAGPETLDWDAQPNPFREFAGCARTDLPLTSDDLMASFAEVCQDTAPAR PLTVDGVALLLELSFGLAAWKEYGPDRWALRCNPSSGNLHPTEAYVIAENVPGLGDGLHHYVSRDHVLEQRCRRGMRSAG EPRLWLGLSSIHWREAWKYGERAFRYCQLDLGHALGAISYAAAALGWTTHVIDGVDPTRLADMLGLDRASDFEGVEAEDP DVLVAITPRRPHQPVHSDRPPLWTIGDIWTGVANRLDRHPLYRWPVIPEVSAATTGTALHELTTALLLPRRASGSTARAA ELILGRRSAQRFDTKFTMTADVLLQLLDALLPRATPPWNGWPFAARVHPLLFVHRVDGLTPGLYALPRSPDAETGLRRAL RSDFDWQRVARAPDHLPLFHLLPTDSRGVIRTASCHQAIAGDSCFAVAMLAEFQALVGDNSWRYRQLHWEAGLIGHALYL EAEAAGLRGTGIGCYFDDSVHEMLGVAGDQFQSLYHFTVGRPLTDNRITTLQAYPGRTRNEAGVSP
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60218; Mature: 60086
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSSRAAAAPAPTDIALAYHARTKHSLKRYAAGPETLDWDAQPNPFREFAGCARTDLP CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC LTSDDLMASFAEVCQDTAPARPLTVDGVALLLELSFGLAAWKEYGPDRWALRCNPSSGNL CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC HPTEAYVIAENVPGLGDGLHHYVSRDHVLEQRCRRGMRSAGEPRLWLGLSSIHWREAWKY CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH GERAFRYCQLDLGHALGAISYAAAALGWTTHVIDGVDPTRLADMLGLDRASDFEGVEAED HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC PDVLVAITPRRPHQPVHSDRPPLWTIGDIWTGVANRLDRHPLYRWPVIPEVSAATTGTAL CCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHH HELTTALLLPRRASGSTARAAELILGRRSAQRFDTKFTMTADVLLQLLDALLPRATPPWN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCC GWPFAARVHPLLFVHRVDGLTPGLYALPRSPDAETGLRRALRSDFDWQRVARAPDHLPLF CCCCHHHHHHHHEEEHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE HLLPTDSRGVIRTASCHQAIAGDSCFAVAMLAEFQALVGDNSWRYRQLHWEAGLIGHALY EECCCCCCCCEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE LEAEAAGLRGTGIGCYFDDSVHEMLGVAGDQFQSLYHFTVGRPLTDNRITTLQAYPGRTR EEECCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC NEAGVSP CCCCCCC >Mature Secondary Structure SVSSSRAAAAPAPTDIALAYHARTKHSLKRYAAGPETLDWDAQPNPFREFAGCARTDLP CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC LTSDDLMASFAEVCQDTAPARPLTVDGVALLLELSFGLAAWKEYGPDRWALRCNPSSGNL CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC HPTEAYVIAENVPGLGDGLHHYVSRDHVLEQRCRRGMRSAGEPRLWLGLSSIHWREAWKY CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH GERAFRYCQLDLGHALGAISYAAAALGWTTHVIDGVDPTRLADMLGLDRASDFEGVEAED HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC PDVLVAITPRRPHQPVHSDRPPLWTIGDIWTGVANRLDRHPLYRWPVIPEVSAATTGTAL CCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHH HELTTALLLPRRASGSTARAAELILGRRSAQRFDTKFTMTADVLLQLLDALLPRATPPWN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCC GWPFAARVHPLLFVHRVDGLTPGLYALPRSPDAETGLRRALRSDFDWQRVARAPDHLPLF CCCCHHHHHHHHEEEHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE HLLPTDSRGVIRTASCHQAIAGDSCFAVAMLAEFQALVGDNSWRYRQLHWEAGLIGHALY EECCCCCCCCEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE LEAEAAGLRGTGIGCYFDDSVHEMLGVAGDQFQSLYHFTVGRPLTDNRITTLQAYPGRTR EEECCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC NEAGVSP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA