| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yfhC [C]
Identifier: 146338815
GI number: 146338815
Start: 1874763
End: 1875182
Strand: Reverse
Name: yfhC [C]
Synonym: BRADO1749
Alternate gene names: 146338815
Gene position: 1875182-1874763 (Counterclockwise)
Preceding gene: 146338817
Following gene: 146338813
Centisome position: 25.15
GC content: 66.9
Gene sequence:
>420_bases ATGTCACACGGAAATCATCCGTTTGCGGCCATCCTGGTCGACGGCGATGGACGGGTGCTGATCGAGGCAGAGAACGGCTA CATGCCCGACCGCGACGCCACGGCGCATGCGGAGCGGCTGGTGGCCACACAGGCATGCAGATCGATCGCGCCAGACATCC GAGCGACCGCGACGCTCTATTCGTCGGCCGAGCCCTGCGCGATGTGCGCCGGCGCGATCTACTGGGCCGGGATCGGCCGC GTGGTCTATGGCTTGAGTGAGCGGCGGCTGCGCGACTTCACCGGCAACCATCCGGAAAACCCGACGCTCGACCTGCCCTG CCGCGACGTGTTCGCGAGCGGTCAGCGGACGACAGAGGTGCTGGGTCCGCTGCTGGAGGACGAGGCGGCTGCGCTGCATG CCGGCGTCTGGGAAAAATAA
Upstream 100 bases:
>100_bases GGCAGGCAACGCGGGTCAAACGGACGGGAGCGGCTCTGGCGACGCGCATCCGCGTGACGCCCACTTCCTGCGCCAAAGCT TCGCCGTTGCACGCCGCTCG
Downstream 100 bases:
>100_bases AGCCTCGCAAAATCAAAAGGCGCCGCAACCTCAGCTGCGGCGCCTCGATGTGCTCAATCGATCAGAACTTGACGGTCACG CCCGAATACAGGGAGGACTC
Product: putative cytidine and deoxycytidylate deaminase zinc-binding protein
Products: NA
Alternate protein names: Cytidine/Deoxycytidylate Deaminase Family Protein; Cytosine/Adenosine Deaminase; Guanine Deaminase; Cytidine/Deoxycytidine Deaminase; Cytosine Deaminase; Deaminase; Purine Deaminase Protein; CMP/DCMP Deaminase Protein; Cytosine/Adenosine Deaminases; CMP/DCMP Deaminase; Cytidine And Deoxycytidylate Deaminase; DCMP Deaminase; TRNA-Specific Adenosine Deaminase
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGR VVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK
Sequences:
>Translated_139_residues MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGR VVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK >Mature_138_residues SHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGRV VYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK
Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14978; Mature: 14847
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLY CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH SSAEPCAMCAGAIYWAGIGRVVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH LGPLLEDEAAALHAGVWEK HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLY CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH SSAEPCAMCAGAIYWAGIGRVVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH LGPLLEDEAAALHAGVWEK HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA