Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yfhC [C]

Identifier: 146338815

GI number: 146338815

Start: 1874763

End: 1875182

Strand: Reverse

Name: yfhC [C]

Synonym: BRADO1749

Alternate gene names: 146338815

Gene position: 1875182-1874763 (Counterclockwise)

Preceding gene: 146338817

Following gene: 146338813

Centisome position: 25.15

GC content: 66.9

Gene sequence:

>420_bases
ATGTCACACGGAAATCATCCGTTTGCGGCCATCCTGGTCGACGGCGATGGACGGGTGCTGATCGAGGCAGAGAACGGCTA
CATGCCCGACCGCGACGCCACGGCGCATGCGGAGCGGCTGGTGGCCACACAGGCATGCAGATCGATCGCGCCAGACATCC
GAGCGACCGCGACGCTCTATTCGTCGGCCGAGCCCTGCGCGATGTGCGCCGGCGCGATCTACTGGGCCGGGATCGGCCGC
GTGGTCTATGGCTTGAGTGAGCGGCGGCTGCGCGACTTCACCGGCAACCATCCGGAAAACCCGACGCTCGACCTGCCCTG
CCGCGACGTGTTCGCGAGCGGTCAGCGGACGACAGAGGTGCTGGGTCCGCTGCTGGAGGACGAGGCGGCTGCGCTGCATG
CCGGCGTCTGGGAAAAATAA

Upstream 100 bases:

>100_bases
GGCAGGCAACGCGGGTCAAACGGACGGGAGCGGCTCTGGCGACGCGCATCCGCGTGACGCCCACTTCCTGCGCCAAAGCT
TCGCCGTTGCACGCCGCTCG

Downstream 100 bases:

>100_bases
AGCCTCGCAAAATCAAAAGGCGCCGCAACCTCAGCTGCGGCGCCTCGATGTGCTCAATCGATCAGAACTTGACGGTCACG
CCCGAATACAGGGAGGACTC

Product: putative cytidine and deoxycytidylate deaminase zinc-binding protein

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase Family Protein; Cytosine/Adenosine Deaminase; Guanine Deaminase; Cytidine/Deoxycytidine Deaminase; Cytosine Deaminase; Deaminase; Purine Deaminase Protein; CMP/DCMP Deaminase Protein; Cytosine/Adenosine Deaminases; CMP/DCMP Deaminase; Cytidine And Deoxycytidylate Deaminase; DCMP Deaminase; TRNA-Specific Adenosine Deaminase

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGR
VVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK

Sequences:

>Translated_139_residues
MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGR
VVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK
>Mature_138_residues
SHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPCAMCAGAIYWAGIGRV
VYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEVLGPLLEDEAAALHAGVWEK

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14978; Mature: 14847

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLY
CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
SSAEPCAMCAGAIYWAGIGRVVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH
LGPLLEDEAAALHAGVWEK
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLY
CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
SSAEPCAMCAGAIYWAGIGRVVYGLSERRLRDFTGNHPENPTLDLPCRDVFASGQRTTEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH
LGPLLEDEAAALHAGVWEK
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA