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The map label for this gene is crtD [H]

Identifier: 146338682

GI number: 146338682

Start: 1728066

End: 1729604

Strand: Reverse

Name: crtD [H]

Synonym: BRADO1614

Alternate gene names: 146338682

Gene position: 1729604-1728066 (Counterclockwise)

Preceding gene: 146338695

Following gene: 146338681

Centisome position: 23.2

GC content: 69.85

Gene sequence:

>1539_bases
GTGCGAGCAATGGCCGATCACCGCGTGATCGTGGTTGGCGCCGGCATCGCCGGCCTCAGCGCCGCGCTCAGCCTCGCCGC
GAGCGGAGTCCAGGTGACGGTGCTCGAGCGCGCGGCCGCCCCGGGCGGCAAGATGCGCCAGATCGCAATCGGCCCGGCCC
GCATCGACTCTGGTCCGACCGTGTTCACGATGCGCTGGGTGTTCGACGAGCTGTTTGCGGAGCTTGGCACGACGCTCGAG
GATCATCTCACGCTGACGCCGCTCGATATCCTCGCCCGCCATGCCTGGACCGATCGCCGCACGCTCGACCTGTTCGCCGA
CGAAGACAGATCGACCGACGCGATCGGCCATTTCGCCGGACGCAGCGAGGCCGAGGGCTACCGCGCCTTTTGCCGCGATG
CGAGGCGCATCTTCGAGACGCTCAGGGACCCCTTCATCCGTACGCCGGCGCCGAGCATGACGCATCTCCTGCGCAATGCC
GGCTTCCGCGATCTCACCGCGATCCGACCGTTCCAGACCCTGTGGAAGGCGCTCGGCGGCTATTTTCGCGACGCCCGCCT
GCAGCAACTGTTCGGGCGCTACGCCACCTATTGCGGCTCGTCGCCCTTCCATGCGCCGGCGACGCTGATGCTGGTTGCCC
ATGTCGAGCAGGCCGGCGTCTGGCTGATCGACGGCGGCATGCATGAGCTCGCCGCCGGCCTGGCCGCGCTGGCGCGGCGC
CACGGCGTCGATATCCGCTACGAGAGTGAGGTCGCCCGCGTCGTCACGAACAGCGGCCGCGCCGCGGGCGTGCGCCTCGC
GGACGGCGAGCAGCTCGACGCCGACGCCGTCATCGCAACGGCCGATGTTGCCGCGCTGGCGCAGGGCCTGCTCGGCGGCG
ATGCCGCGCGGTCGCTTCCCGCGATCCCTCACTCCGCACGCTCCCTCTCAGCGATGACCTGGAGCTGCATGGCGCGCGCC
GACGGCTTCCCGCTCGTCAGGCACAACGTGTTCTTCTCGCGCGACTACAGCACCGAGTTCGATCAGCTGATCGAGCGCCG
CGCGATGCCGGCCGAGCCCACGGTCTATGTCTGCGCCCAGGACCGCGACGACCAGCCGCACGAGGCCGGGGTGAACGAGC
CGCTGTTCGTTCTGATCAACGCGCCGGCCACCGGCGACCATCATCGCTTCCCGCCTTCGGAGATCAGCCAATGTGCCCGC
CAGACCTTCGACCTGCTGCAGCGCTGCGGCCTGAGCATCGCGACGACGCCGGAATTGACCCGCGTGACGACGCCGGCGGA
TTTCAACCGGATGTTTCCGGGCACGGGGGGCGCGTTGTACGGCCGCAGCTCGCACGGCTGGATGGCATCATTCCAGCGGC
CGGGCGCGCAGACGAAGCTGCCAGGGCTCTACGTGGCGGGGGGCAGCGCCCATCCGGGACCGGGCGTCCCGATGGCGGCC
TTGTCGGGCCGGATGGCCGCCGGCAAGGCGATCTCCGACCTCGCTTCGATCGCGCGGTCCCAAAGGACGGCTATGCGTGG
TGGTATGTCGACGCGCTGA

Upstream 100 bases:

>100_bases
TGCCGCGAGGCCATTCGGGTCCTCGCCTATGTAAATTCTAACTTACACTCATACTGTAAATCATGCTAGACATTTCCTGC
AGCAGGTCCAGCGGACGGGA

Downstream 100 bases:

>100_bases
GCGACGACGGCCGCTTCGGCATCACCGTGATCGCCTTCGTCGGCAGCGTGTTCTCGCCCTATTATGCCTGGGCGCGGCGG
CGCGGACCAGCCGATGCCGA

Product: hydroxyneurosporene and rhodopin dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRAMADHRVIVVGAGIAGLSAALSLAASGVQVTVLERAAAPGGKMRQIAIGPARIDSGPTVFTMRWVFDELFAELGTTLE
DHLTLTPLDILARHAWTDRRTLDLFADEDRSTDAIGHFAGRSEAEGYRAFCRDARRIFETLRDPFIRTPAPSMTHLLRNA
GFRDLTAIRPFQTLWKALGGYFRDARLQQLFGRYATYCGSSPFHAPATLMLVAHVEQAGVWLIDGGMHELAAGLAALARR
HGVDIRYESEVARVVTNSGRAAGVRLADGEQLDADAVIATADVAALAQGLLGGDAARSLPAIPHSARSLSAMTWSCMARA
DGFPLVRHNVFFSRDYSTEFDQLIERRAMPAEPTVYVCAQDRDDQPHEAGVNEPLFVLINAPATGDHHRFPPSEISQCAR
QTFDLLQRCGLSIATTPELTRVTTPADFNRMFPGTGGALYGRSSHGWMASFQRPGAQTKLPGLYVAGGSAHPGPGVPMAA
LSGRMAAGKAISDLASIARSQRTAMRGGMSTR

Sequences:

>Translated_512_residues
MRAMADHRVIVVGAGIAGLSAALSLAASGVQVTVLERAAAPGGKMRQIAIGPARIDSGPTVFTMRWVFDELFAELGTTLE
DHLTLTPLDILARHAWTDRRTLDLFADEDRSTDAIGHFAGRSEAEGYRAFCRDARRIFETLRDPFIRTPAPSMTHLLRNA
GFRDLTAIRPFQTLWKALGGYFRDARLQQLFGRYATYCGSSPFHAPATLMLVAHVEQAGVWLIDGGMHELAAGLAALARR
HGVDIRYESEVARVVTNSGRAAGVRLADGEQLDADAVIATADVAALAQGLLGGDAARSLPAIPHSARSLSAMTWSCMARA
DGFPLVRHNVFFSRDYSTEFDQLIERRAMPAEPTVYVCAQDRDDQPHEAGVNEPLFVLINAPATGDHHRFPPSEISQCAR
QTFDLLQRCGLSIATTPELTRVTTPADFNRMFPGTGGALYGRSSHGWMASFQRPGAQTKLPGLYVAGGSAHPGPGVPMAA
LSGRMAAGKAISDLASIARSQRTAMRGGMSTR
>Mature_512_residues
MRAMADHRVIVVGAGIAGLSAALSLAASGVQVTVLERAAAPGGKMRQIAIGPARIDSGPTVFTMRWVFDELFAELGTTLE
DHLTLTPLDILARHAWTDRRTLDLFADEDRSTDAIGHFAGRSEAEGYRAFCRDARRIFETLRDPFIRTPAPSMTHLLRNA
GFRDLTAIRPFQTLWKALGGYFRDARLQQLFGRYATYCGSSPFHAPATLMLVAHVEQAGVWLIDGGMHELAAGLAALARR
HGVDIRYESEVARVVTNSGRAAGVRLADGEQLDADAVIATADVAALAQGLLGGDAARSLPAIPHSARSLSAMTWSCMARA
DGFPLVRHNVFFSRDYSTEFDQLIERRAMPAEPTVYVCAQDRDDQPHEAGVNEPLFVLINAPATGDHHRFPPSEISQCAR
QTFDLLQRCGLSIATTPELTRVTTPADFNRMFPGTGGALYGRSSHGWMASFQRPGAQTKLPGLYVAGGSAHPGPGVPMAA
LSGRMAAGKAISDLASIARSQRTAMRGGMSTR

Specific function: Converts hydroxyneurosporene to demethylspheroidene or methoxyneurosporene to spheroidene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55161; Mature: 55161

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMADHRVIVVGAGIAGLSAALSLAASGVQVTVLERAAAPGGKMRQIAIGPARIDSGPT
CCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCEEEEEECCCEECCCCC
VFTMRWVFDELFAELGTTLEDHLTLTPLDILARHAWTDRRTLDLFADEDRSTDAIGHFAG
EEEHHHHHHHHHHHHCCCHHHCEEECHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCC
RSEAEGYRAFCRDARRIFETLRDPFIRTPAPSMTHLLRNAGFRDLTAIRPFQTLWKALGG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH
YFRDARLQQLFGRYATYCGSSPFHAPATLMLVAHVEQAGVWLIDGGMHELAAGLAALARR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEHHHCCEEEEECCHHHHHHHHHHHHHH
HGVDIRYESEVARVVTNSGRAAGVRLADGEQLDADAVIATADVAALAQGLLGGDAARSLP
HCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHCCC
AIPHSARSLSAMTWSCMARADGFPLVRHNVFFSRDYSTEFDQLIERRAMPAEPTVYVCAQ
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC
DRDDQPHEAGVNEPLFVLINAPATGDHHRFPPSEISQCARQTFDLLQRCGLSIATTPELT
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCE
RVTTPADFNRMFPGTGGALYGRSSHGWMASFQRPGAQTKLPGLYVAGGSAHPGPGVPMAA
EECCCCCCHHCCCCCCCEECCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHH
LSGRMAAGKAISDLASIARSQRTAMRGGMSTR
HCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRAMADHRVIVVGAGIAGLSAALSLAASGVQVTVLERAAAPGGKMRQIAIGPARIDSGPT
CCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCEEEEEECCCEECCCCC
VFTMRWVFDELFAELGTTLEDHLTLTPLDILARHAWTDRRTLDLFADEDRSTDAIGHFAG
EEEHHHHHHHHHHHHCCCHHHCEEECHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCC
RSEAEGYRAFCRDARRIFETLRDPFIRTPAPSMTHLLRNAGFRDLTAIRPFQTLWKALGG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH
YFRDARLQQLFGRYATYCGSSPFHAPATLMLVAHVEQAGVWLIDGGMHELAAGLAALARR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEHHHCCEEEEECCHHHHHHHHHHHHHH
HGVDIRYESEVARVVTNSGRAAGVRLADGEQLDADAVIATADVAALAQGLLGGDAARSLP
HCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHCCC
AIPHSARSLSAMTWSCMARADGFPLVRHNVFFSRDYSTEFDQLIERRAMPAEPTVYVCAQ
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC
DRDDQPHEAGVNEPLFVLINAPATGDHHRFPPSEISQCARQTFDLLQRCGLSIATTPELT
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCE
RVTTPADFNRMFPGTGGALYGRSSHGWMASFQRPGAQTKLPGLYVAGGSAHPGPGVPMAA
EECCCCCCHHCCCCCCCEECCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHH
LSGRMAAGKAISDLASIARSQRTAMRGGMSTR
HCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2747617; 2144293 [H]