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The map label for this gene is ssuC [C]

Identifier: 146338667

GI number: 146338667

Start: 1710326

End: 1711102

Strand: Reverse

Name: ssuC [C]

Synonym: BRADO1599

Alternate gene names: 146338667

Gene position: 1711102-1710326 (Counterclockwise)

Preceding gene: 146338668

Following gene: 146338666

Centisome position: 22.95

GC content: 64.22

Gene sequence:

>777_bases
GTGATCCGACCTCTCGATCCCGTCAGCGCCCGATCAAGAACAGCGCTCGGCCTCGCCTTCTTCGTGCTTTTCGTCGTCGC
GTGGTCGCTGGCGACGTTCGGCGGCTATGTGTCGAAGACCTTCCTCGCCGATCCGCTGACGATGCTGCGCGAGGGCTGGG
ACCTGCTGGTCAAATTCGGCTTCCTCTACGACATCGGCATGACCGTCTGGCGCGTGGTCGGCGGGTTCGTGCTCGCGGCT
GCGATCGCCGTGCCGCTCGGCCTCTTGATGGGCGCGTACAAGCCGGTCGAGGCGTTCCTTGAGCCGTTCGTCTCCTTCGC
GCGCTACCTGCCTGCCTCCGCCTTCATCCCCTTGCTCATCCTGTGGGCCGGCATCGGCGAGCTGCAGAAGCTGCTGATCA
TCTTCATCGGCTCGGTGTTCCAGATCATCCTGATGATCACGGTGACCGTCGGCAACACGCGGCGCGACCTCGTCGAAGCC
GCCTATACGCTCGGCGCCAGCGACCGCGGCATCATCGCCCGCGTACTGCTGCCATCGGCTGCGCCCGATATCGCCGAGGT
GCTGCGGCTCGTGCTCGGCTGGGCCTGGACCTATGTCATCGTCGCCGAGCTGATCGGCTCCTCCTCCGGCATCGGCCACA
TGATCACCGACAGCCAGGCGCTGCTCAACACCGGGCAGATCATCTTCGGCATTATCATCATCGGCCTGATCGGGCTGATC
TCGGATTTCCTGTTCAAGGCCTTCAACGCCTGGCTGTTCCCGTGGAAGCTCGCATGA

Upstream 100 bases:

>100_bases
TGGCAATGACGGTGATGATACGTTCTGCCCAAAGACGACGTCCATCTGCTCAGAAGCTGTCTCCTCGAACCGCCCGCACC
ACTCCACGAAAGCCTGCTCC

Downstream 100 bases:

>100_bases
CCACGCTCGTCATCGATCAGGTCACCCGCATTTTCCCGGCCCGCCAGGGCCACGCGCCGACGCGGGCGCTGGAGCCGGTC
GCGCTCACCATTGGCAACAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MIRPLDPVSARSRTALGLAFFVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFGFLYDIGMTVWRVVGGFVLAA
AIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELQKLLIIFIGSVFQIILMITVTVGNTRRDLVEA
AYTLGASDRGIIARVLLPSAAPDIAEVLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIIIGLIGLI
SDFLFKAFNAWLFPWKLA

Sequences:

>Translated_258_residues
MIRPLDPVSARSRTALGLAFFVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFGFLYDIGMTVWRVVGGFVLAA
AIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELQKLLIIFIGSVFQIILMITVTVGNTRRDLVEA
AYTLGASDRGIIARVLLPSAAPDIAEVLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIIIGLIGLI
SDFLFKAFNAWLFPWKLA
>Mature_258_residues
MIRPLDPVSARSRTALGLAFFVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFGFLYDIGMTVWRVVGGFVLAA
AIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLILWAGIGELQKLLIIFIGSVFQIILMITVTVGNTRRDLVEA
AYTLGASDRGIIARVLLPSAAPDIAEVLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIIIGLIGLI
SDFLFKAFNAWLFPWKLA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=218, Percent_Identity=32.1100917431193, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786564, Length=255, Percent_Identity=28.6274509803922, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28070; Mature: 28070

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIRPLDPVSARSRTALGLAFFVLFVVAWSLATFGGYVSKTFLADPLTMLREGWDLLVKFG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLYDIGMTVWRVVGGFVLAAAIAVPLGLLMGAYKPVEAFLEPFVSFARYLPASAFIPLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LWAGIGELQKLLIIFIGSVFQIILMITVTVGNTRRDLVEAAYTLGASDRGIIARVLLPSA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC
APDIAEVLRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIIIGLIGLI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
SDFLFKAFNAWLFPWKLA
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA