| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338663
Identifier: 146338663
GI number: 146338663
Start: 1706880
End: 1708097
Strand: Reverse
Name: 146338663
Synonym: BRADO1595
Alternate gene names: NA
Gene position: 1708097-1706880 (Counterclockwise)
Preceding gene: 146338666
Following gene: 146338662
Centisome position: 22.91
GC content: 71.02
Gene sequence:
>1218_bases ATGGACTCGCTGATCTCCGCGGCGGCGCAGGCGCTCGCCGCGGGTGATCCGCTCGGCGCGCTGAATCGCGTTGCATTGCG CGACGATCCGCCGGCGCTCGCCGTGCGGGGCATTGCGATGGCGCGGCTGGGCGACTTTGCGCGCGCGAAGGCGCTGCTGC GGCGCGCGGCGCGCAGCTTCGGTCCGAAGGCGGCGATGGCGCGCGCCCGCTGCGCCGTTGCAGAAGCCGAGATCGCGCTC GCGGCGCGTGAGCTGTCGTGGCCGACGAAGGCACTGGCTGAAGCGCGTGACATCCTGGAGCAGCACGGCGACCGCACCAA TGCCGCCTATGCGCGGAGCCTCGAAATCCGGCGGATGGTCCTCATTGGTCATCTCGATGCGGCCGAACGCGGCTTGGCCG ATCTCGATCCGTCCCCTTTGCATCCGGCGGCGCGCACGATCTACGAGCTGATCGTCGCCGGCTTGGCCCTGCGCCGCCTG CAGATCAGGACCGCGCAAGCCGCGCTGGAGCGCGCCGCGCGCACGGCGCGGCAGACGCACAGTCCGGAGCTGCATGCCGA GGTGGAGCGGCTCGCTGCAACGCTGTCCGCGCCGGCCGCGCGCCTGATCCAGGTCCGGAACGAGCGGCTGCTGCGGCTCG ACGAGGTCGAGGCGCTGTTCCGATCGGACAGCCTGATCATCGATGCCTGCCGGCTCGCGGTGCGGCAAGGCGACCGCATC GTACCGCTGGCGCGGCGTCCGGTCTTGTTTGCGCTTGCCCGCAGGCTGGCGGTGACGCCCGATGATGTCTCGCGGTCGGA GCTGATCACCGCGGCATTCCGCGGCAAGGAGGCCGACGAGTCGCATCGCGCGCGCTTGCGCGTCGAGATCGGGCGCCTGC GTCAGCTCTTGAAGGGCATGGCGGAGATCAATGCCACGCGTGACGGCTTTGCCATGGCCGCTTGCGAAGGCCGCGATGTC GTCGTGCTGGCGCAGCCGAGCGAGGACGAGAACGCTCCGGTGCTGGCCTGCCTCGCCGACGGCGAGGCATGGTCGAGCTC CGGCCTTGCGCTGGCGCTCGGCGCCAGCCAGCGCACGGTGCAGCGCGCGCTCGACGCTCTCGCTTTGTCAGGCAAGGTCC AATCGTTTGGTCACGGCCGCGCCCAGCGCTGGACCTGCCCGGTGGTGCCGGCATTCGCGACCAGCTTGTTACTCCCGGCC TGGTCGTCGCTCGACTAG
Upstream 100 bases:
>100_bases TGAGATGCATGGTCATGTCCGTCTCCTTTGCGTGTTGACCGCATCTGAGACTAGGATCGCAGCGGGAGGAGCCGGGAGTG ACAAGTGTGGCGGGATTTGC
Downstream 100 bases:
>100_bases CGTGCCACCGTCAGCAATGGATGGATCATCACATGGCAAGAGCACAGGCAGAGATCATTCGCGAATACGGCCCGTTCGAC GGCGCCGAGCGCGTCAACGG
Product: putative DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MDSLISAAAQALAAGDPLGALNRVALRDDPPALAVRGIAMARLGDFARAKALLRRAARSFGPKAAMARARCAVAEAEIAL AARELSWPTKALAEARDILEQHGDRTNAAYARSLEIRRMVLIGHLDAAERGLADLDPSPLHPAARTIYELIVAGLALRRL QIRTAQAALERAARTARQTHSPELHAEVERLAATLSAPAARLIQVRNERLLRLDEVEALFRSDSLIIDACRLAVRQGDRI VPLARRPVLFALARRLAVTPDDVSRSELITAAFRGKEADESHRARLRVEIGRLRQLLKGMAEINATRDGFAMAACEGRDV VVLAQPSEDENAPVLACLADGEAWSSSGLALALGASQRTVQRALDALALSGKVQSFGHGRAQRWTCPVVPAFATSLLLPA WSSLD
Sequences:
>Translated_405_residues MDSLISAAAQALAAGDPLGALNRVALRDDPPALAVRGIAMARLGDFARAKALLRRAARSFGPKAAMARARCAVAEAEIAL AARELSWPTKALAEARDILEQHGDRTNAAYARSLEIRRMVLIGHLDAAERGLADLDPSPLHPAARTIYELIVAGLALRRL QIRTAQAALERAARTARQTHSPELHAEVERLAATLSAPAARLIQVRNERLLRLDEVEALFRSDSLIIDACRLAVRQGDRI VPLARRPVLFALARRLAVTPDDVSRSELITAAFRGKEADESHRARLRVEIGRLRQLLKGMAEINATRDGFAMAACEGRDV VVLAQPSEDENAPVLACLADGEAWSSSGLALALGASQRTVQRALDALALSGKVQSFGHGRAQRWTCPVVPAFATSLLLPA WSSLD >Mature_405_residues MDSLISAAAQALAAGDPLGALNRVALRDDPPALAVRGIAMARLGDFARAKALLRRAARSFGPKAAMARARCAVAEAEIAL AARELSWPTKALAEARDILEQHGDRTNAAYARSLEIRRMVLIGHLDAAERGLADLDPSPLHPAARTIYELIVAGLALRRL QIRTAQAALERAARTARQTHSPELHAEVERLAATLSAPAARLIQVRNERLLRLDEVEALFRSDSLIIDACRLAVRQGDRI VPLARRPVLFALARRLAVTPDDVSRSELITAAFRGKEADESHRARLRVEIGRLRQLLKGMAEINATRDGFAMAACEGRDV VVLAQPSEDENAPVLACLADGEAWSSSGLALALGASQRTVQRALDALALSGKVQSFGHGRAQRWTCPVVPAFATSLLLPA WSSLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43582; Mature: 43582
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLISAAAQALAAGDPLGALNRVALRDDPPALAVRGIAMARLGDFARAKALLRRAARSF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPKAAMARARCAVAEAEIALAARELSWPTKALAEARDILEQHGDRTNAAYARSLEIRRMV CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LIGHLDAAERGLADLDPSPLHPAARTIYELIVAGLALRRLQIRTAQAALERAARTARQTH EEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPELHAEVERLAATLSAPAARLIQVRNERLLRLDEVEALFRSDSLIIDACRLAVRQGDRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE VPLARRPVLFALARRLAVTPDDVSRSELITAAFRGKEADESHRARLRVEIGRLRQLLKGM ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AEINATRDGFAMAACEGRDVVVLAQPSEDENAPVLACLADGEAWSSSGLALALGASQRTV HHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHH QRALDALALSGKVQSFGHGRAQRWTCPVVPAFATSLLLPAWSSLD HHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDSLISAAAQALAAGDPLGALNRVALRDDPPALAVRGIAMARLGDFARAKALLRRAARSF CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPKAAMARARCAVAEAEIALAARELSWPTKALAEARDILEQHGDRTNAAYARSLEIRRMV CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LIGHLDAAERGLADLDPSPLHPAARTIYELIVAGLALRRLQIRTAQAALERAARTARQTH EEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPELHAEVERLAATLSAPAARLIQVRNERLLRLDEVEALFRSDSLIIDACRLAVRQGDRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE VPLARRPVLFALARRLAVTPDDVSRSELITAAFRGKEADESHRARLRVEIGRLRQLLKGM ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AEINATRDGFAMAACEGRDVVVLAQPSEDENAPVLACLADGEAWSSSGLALALGASQRTV HHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHH QRALDALALSGKVQSFGHGRAQRWTCPVVPAFATSLLLPAWSSLD HHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA