Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is dhlB [H]
Identifier: 146338604
GI number: 146338604
Start: 1636685
End: 1637500
Strand: Reverse
Name: dhlB [H]
Synonym: BRADO1532
Alternate gene names: 146338604
Gene position: 1637500-1636685 (Counterclockwise)
Preceding gene: 146338606
Following gene: 146338599
Centisome position: 21.96
GC content: 63.36
Gene sequence:
>816_bases TTGCGCCATCGGCTGGCGGAACTCGTATCAGCCCTCCGGGCGCAGCCCGCTCCCGACACAAGGACAGGTCCCGTGGCGAT CAACACCGTGGTCTTCGACGCTTACGGCACGCTCTACGACATCCAATCCGTGGCGGCGGTCACCGATGCGGCCTTTCCGG GCCATGGCGACATGATCACGCAGATCTGGCGCATGAAGCAGCTCGAATACACTTGGCTGCGCTCGCTGATGCGGCGCTAC GAGGATTTCGAGACGGTCACCCGGCAGTCCCTGATCTACACGCTGCGGATTCTCGGACTTCGCTACGAAGAGGCGCTGCT CGGAACGATCATGGACAAATACGTCCACCTCGATCTCTACCCGGACGCGCTGCCGGCCCTGAACCATCTCCAGGGACGCA AGCTCGCGATCCTCTCGAACGGCGCGCCAGCGATGTTGAATGCCTTGATCCGAAACACCGGGCTCGATCGCCTGCTCGAC AAGACCATCAGCGTCGATGCCAGGAGGATCTTCAAGCCCAGCCCCGAAGCCTATTCCTTGATCGAGTCCGAACTCGGCGC CATGCCCGCCGACGTCCTGTTCGTCAGCTCCAATCCGTGGGACGCAATCGGAGCTAAAGCCTTCGGGCTGAACGTCGCCT GGATCGAGCGGGTCACGCCCGAAGCGATGGCCGCGGCTTGCGAGCGCAGCACAGTCGTCCCTCCGCTGACGATGTTCAAG GCGATGCGAACGCAGATGGACGAGCTCGGGCTCGCGCCCGACCACCGGATCCGGGGATTGTCTGAGCTCGCTGGGCTGTT GCCACTGCTGCCGTAG
Upstream 100 bases:
>100_bases CGATATCGAAGTTCACGACAATCCCCGCTATCGAAAAAGACGATACTCACATCGTCATTATTCACTTTGTCGGCCGGGCC ACGCTTCGTAAAGACCAGAC
Downstream 100 bases:
>100_bases ACCGATCCGCAGCATCCCTACTGATAGCACGCCTCCAGCGCCGCGGCGGCGCGGTACAGCGTCATCTCGTCGAGATGACG CGCGATCAGCATCGCGCCGA
Product: 2-haloacid dehalogenase
Products: NA
Alternate protein names: 2-haloalkanoic acid dehalogenase; Halocarboxylic acid halidohydrolase; L-2-haloacid dehalogenase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRHRLAELVSALRAQPAPDTRTGPVAINTVVFDAYGTLYDIQSVAAVTDAAFPGHGDMITQIWRMKQLEYTWLRSLMRRY EDFETVTRQSLIYTLRILGLRYEEALLGTIMDKYVHLDLYPDALPALNHLQGRKLAILSNGAPAMLNALIRNTGLDRLLD KTISVDARRIFKPSPEAYSLIESELGAMPADVLFVSSNPWDAIGAKAFGLNVAWIERVTPEAMAAACERSTVVPPLTMFK AMRTQMDELGLAPDHRIRGLSELAGLLPLLP
Sequences:
>Translated_271_residues MRHRLAELVSALRAQPAPDTRTGPVAINTVVFDAYGTLYDIQSVAAVTDAAFPGHGDMITQIWRMKQLEYTWLRSLMRRY EDFETVTRQSLIYTLRILGLRYEEALLGTIMDKYVHLDLYPDALPALNHLQGRKLAILSNGAPAMLNALIRNTGLDRLLD KTISVDARRIFKPSPEAYSLIESELGAMPADVLFVSSNPWDAIGAKAFGLNVAWIERVTPEAMAAACERSTVVPPLTMFK AMRTQMDELGLAPDHRIRGLSELAGLLPLLP >Mature_271_residues MRHRLAELVSALRAQPAPDTRTGPVAINTVVFDAYGTLYDIQSVAAVTDAAFPGHGDMITQIWRMKQLEYTWLRSLMRRY EDFETVTRQSLIYTLRILGLRYEEALLGTIMDKYVHLDLYPDALPALNHLQGRKLAILSNGAPAMLNALIRNTGLDRLLD KTISVDARRIFKPSPEAYSLIESELGAMPADVLFVSSNPWDAIGAKAFGLNVAWIERVTPEAMAAACERSTVVPPLTMFK AMRTQMDELGLAPDHRIRGLSELAGLLPLLP
Specific function: Catalyzes the hydrolytic dehalogenation of small L-2- haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Active with 2-halogenated carboxylic acids and converts only the L-isomer of 2-chloropropionic acid with inversion of configurat
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006388 - InterPro: IPR006328 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.8.1.2 [H]
Molecular weight: Translated: 30132; Mature: 30132
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRLAELVSALRAQPAPDTRTGPVAINTVVFDAYGTLYDIQSVAAVTDAAFPGHGDMIT CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHH QIWRMKQLEYTWLRSLMRRYEDFETVTRQSLIYTLRILGLRYEEALLGTIMDKYVHLDLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC PDALPALNHLQGRKLAILSNGAPAMLNALIRNTGLDRLLDKTISVDARRIFKPSPEAYSL CHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH IESELGAMPADVLFVSSNPWDAIGAKAFGLNVAWIERVTPEAMAAACERSTVVPPLTMFK HHHHHCCCCCCEEEECCCCCHHHCCHHHCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHH AMRTQMDELGLAPDHRIRGLSELAGLLPLLP HHHHHHHHHCCCCCHHHCCHHHHHHHHCCCC >Mature Secondary Structure MRHRLAELVSALRAQPAPDTRTGPVAINTVVFDAYGTLYDIQSVAAVTDAAFPGHGDMIT CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHH QIWRMKQLEYTWLRSLMRRYEDFETVTRQSLIYTLRILGLRYEEALLGTIMDKYVHLDLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC PDALPALNHLQGRKLAILSNGAPAMLNALIRNTGLDRLLDKTISVDARRIFKPSPEAYSL CHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH IESELGAMPADVLFVSSNPWDAIGAKAFGLNVAWIERVTPEAMAAACERSTVVPPLTMFK HHHHHCCCCCCEEEECCCCCHHHCCHHHCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHH AMRTQMDELGLAPDHRIRGLSELAGLLPLLP HHHHHHHHHCCCCCHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1744048; 7580000; 9407083 [H]