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The map label for this gene is comD [H]

Identifier: 146338525

GI number: 146338525

Start: 1547869

End: 1548414

Strand: Reverse

Name: comD [H]

Synonym: BRADO1444

Alternate gene names: 146338525

Gene position: 1548414-1547869 (Counterclockwise)

Preceding gene: 146338526

Following gene: 146338524

Centisome position: 20.77

GC content: 65.75

Gene sequence:

>546_bases
ATGGCCGCTTCCGATACGCTTACCTCAGCCCCCGACTGGCCGCTCGCCATCTACGACGCGCTCAAAGCCGCCGACGTCAG
GCAGCTCTGCTACGTGCCCGACGCCGGCCATTCCCGGCTGATCCGCCTCGCGCATGACGATCCGGCGATCGCCACCACCG
TGCTCACCACCGAGGAGGAAGGCGTTGCGCTCTCGGCCGGTGCGTGGCTCGGCGGCCAGCGGGCGGTGCTGCTGATGCAA
TCGAGCGGGGTCGGCAATTGCGTCAACATGTTCTCTCTGCTTGCGAGCTGCCGCTTCCCGTTTCTCACCTTCGTCACGAT
GCGCGGCGAATGGGCAGAGTTCAATCCATGGCAGGTGCCGATGGGCAAGGCCACGCAATCCGCCTTCGAGATCATGGGTG
TCACCGTGTACCGCCTGGAGCGGCCCGAAGATGCCGGCGAAATGACGGCGGCCGCCGCAAGGCTCGCCTATGACAGCGAT
CAGCCGATCGCGGTGCTGATCTCCCAGCGCATGATCGGCGCCAAGAAGTGGACGGAGGCCAAGTGA

Upstream 100 bases:

>100_bases
TCGAAGCCAAAATGCTTCCCCTCATGGTGAGAAGCCCCGCGGCGGCGTGTTGATCATAAGGCCCGCATCAGATCCCCATA
CGGAGGAACCACAGGACGTC

Downstream 100 bases:

>100_bases
TGCGTGCCACGCTCGATCGCCGGATCGCCGTGAAGGCGCTGCTGCAGGACCGCGGCGACCTGCTGGTCATAAGCGGCCTC
GGCTCGTCGTCCTACGACGT

Product: putative sulfopyruvate decarboxylase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAASDTLTSAPDWPLAIYDALKAADVRQLCYVPDAGHSRLIRLAHDDPAIATTVLTTEEEGVALSAGAWLGGQRAVLLMQ
SSGVGNCVNMFSLLASCRFPFLTFVTMRGEWAEFNPWQVPMGKATQSAFEIMGVTVYRLERPEDAGEMTAAAARLAYDSD
QPIAVLISQRMIGAKKWTEAK

Sequences:

>Translated_181_residues
MAASDTLTSAPDWPLAIYDALKAADVRQLCYVPDAGHSRLIRLAHDDPAIATTVLTTEEEGVALSAGAWLGGQRAVLLMQ
SSGVGNCVNMFSLLASCRFPFLTFVTMRGEWAEFNPWQVPMGKATQSAFEIMGVTVYRLERPEDAGEMTAAAARLAYDSD
QPIAVLISQRMIGAKKWTEAK
>Mature_180_residues
AASDTLTSAPDWPLAIYDALKAADVRQLCYVPDAGHSRLIRLAHDDPAIATTVLTTEEEGVALSAGAWLGGQRAVLLMQS
SGVGNCVNMFSLLASCRFPFLTFVTMRGEWAEFNPWQVPMGKATQSAFEIMGVTVYRLERPEDAGEMTAAAARLAYDSDQ
PIAVLISQRMIGAKKWTEAK

Specific function: Catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde [H]

COG id: COG4032

COG function: function code R; Predicted thiamine-pyrophosphate-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022502
- InterPro:   IPR012001 [H]

Pfam domain/function: PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.79 [H]

Molecular weight: Translated: 19628; Mature: 19496

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASDTLTSAPDWPLAIYDALKAADVRQLCYVPDAGHSRLIRLAHDDPAIATTVLTTEEE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCC
GVALSAGAWLGGQRAVLLMQSSGVGNCVNMFSLLASCRFPFLTFVTMRGEWAEFNPWQVP
CEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
MGKATQSAFEIMGVTVYRLERPEDAGEMTAAAARLAYDSDQPIAVLISQRMIGAKKWTEA
CCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCC
K
C
>Mature Secondary Structure 
AASDTLTSAPDWPLAIYDALKAADVRQLCYVPDAGHSRLIRLAHDDPAIATTVLTTEEE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCC
GVALSAGAWLGGQRAVLLMQSSGVGNCVNMFSLLASCRFPFLTFVTMRGEWAEFNPWQVP
CEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
MGKATQSAFEIMGVTVYRLERPEDAGEMTAAAARLAYDSDQPIAVLISQRMIGAKKWTEA
CCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 10940029 [H]