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The map label for this gene is mmgC [H]

Identifier: 146338523

GI number: 146338523

Start: 1545963

End: 1547129

Strand: Reverse

Name: mmgC [H]

Synonym: BRADO1442

Alternate gene names: 146338523

Gene position: 1547129-1545963 (Counterclockwise)

Preceding gene: 146338524

Following gene: 146338522

Centisome position: 20.75

GC content: 64.35

Gene sequence:

>1167_bases
ATGACAGATCAGCATCAGCACGACGATTACGCCGACATCCGCGATGCAGTGGCCAAGCTGTGCGCGCAGTTCCCCGGTGA
ATATTGGCGTAAGCTCGATCGCGAGATGGCTTATCCCTCCGCCTTCGTCGATGCGCTGACCCAGGCCGGCTATCTCTCGG
TGCTGATCCCCGAGGAATATGGCGGCGCCGGGCTGAAGCTGTCGGCGGCGGCGGCGATCCTGGAGGAAATCCAGCGCGCC
GGCTGCAATGGCGGCGGCTGCCATGCGCAGATGTACACGATGGGCACGGTGCTGCGGCACGGCTCGGCCGAGCAGAAGGC
GAAGTGGCTGCCGAAGGTCGCGAGCGGCGAATTGCGGCTGCAGGCATTCGGCGTCACCGAGCCGACCTCGGGCACCGACA
CGACGTCGCTGAAGACGGTCGCCAAGCGCGACGGCGACAGCTACGTCGTCAACGGCCAGAAGATCTGGACCAGCCGCGCC
GAATATTCCGACCTGATGATCCTGCTGGCGCGCACCACGCCGAAGGATCAGGTGCAGAAGCGCACCGAGGGTCTCTCCGT
CTTCATCGTCGACATGCGCGAGGCCAAGAAGTCCGGGCTGACCATCCGCCCCATCAGAACGATGATGAACCACGCCACGA
CGGAAGTGTTCTTCACCGACATGCGCGTGCCGGCCGAGAATTTGATCGGCGAGGAGGGCAAGGGTTTCCGCTACATCCTC
TCCGGCATGAATGCCGAGCGCATCCTGATCGCGGCCGAATGCGTCGGCGACGCCAAATGGTTCATCGCCAAGGCCACCGC
CTATGCCAAGGAGCGCGTCGTGTTCGGCCGGCCGATCGGCCAGAATCAAGGCATCCAGTTCCCGATCGCCAAGTCCTATG
CGTCCATGCGAGCGGCCGAGTTGATGGTGAAGGAAGCGACGCGCAAATACGAGGCCGGGCTCGACTGCGGCGCCGAGGCC
AACATGGCCAAGATGCTCGCCGCCGACGCCTCCTTCGAGGCGGCCAATGCCTGCATCCAGACCCATGGCGGCTTCGGCTT
CGCCGAGGAATACGACGTCGAGCGCAAGTTCCGCGAGACCCGGCTGTACCAGGTGGCGCCGATCTCGACCAATCTGATCC
TGTCCTACGTCGCCGAGCACGTGCTCGGGATGCCCAGGTCGTACTGA

Upstream 100 bases:

>100_bases
GCATTCCAAGCTTGCCAAGCGGGACCCGCTTGGTCATAGGCTATCAGGAACAAGTCCAGGGAGAGCCCAGGCCGCGTCAC
GGCGGCCCGCGGAGCAATAC

Downstream 100 bases:

>100_bases
GATGCAAACGCGCGCTCGTACGTCAAACCTGTCCTCCTCGCCGCACGCGAATGCGCCAAGACTGCTTCCTCCGTCATTGC
GAGCGAAGCGACGCAATCCA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTDQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRA
GCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELRLQAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRA
EYSDLMILLARTTPKDQVQKRTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYIL
SGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAAELMVKEATRKYEAGLDCGAEA
NMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYVAEHVLGMPRSY

Sequences:

>Translated_388_residues
MTDQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRA
GCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELRLQAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRA
EYSDLMILLARTTPKDQVQKRTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYIL
SGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAAELMVKEATRKYEAGLDCGAEA
NMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYVAEHVLGMPRSY
>Mature_387_residues
TDQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAG
CNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELRLQAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRAE
YSDLMILLARTTPKDQVQKRTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYILS
GMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAAELMVKEATRKYEAGLDCGAEAN
MAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYVAEHVLGMPRSY

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=379, Percent_Identity=29.8153034300792, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI4557233, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI4501857, Length=333, Percent_Identity=32.7327327327327, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI7656849, Length=360, Percent_Identity=31.6666666666667, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI187960098, Length=355, Percent_Identity=30.7042253521127, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI4557231, Length=355, Percent_Identity=30.7042253521127, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI76496475, Length=348, Percent_Identity=32.4712643678161, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI4557235, Length=347, Percent_Identity=32.5648414985591, Blast_Score=158, Evalue=7e-39,
Organism=Homo sapiens, GI226958412, Length=359, Percent_Identity=27.8551532033426, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI226958414, Length=357, Percent_Identity=27.7310924369748, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI21361497, Length=359, Percent_Identity=27.8551532033426, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI7669494, Length=332, Percent_Identity=28.6144578313253, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI4503943, Length=332, Percent_Identity=28.6144578313253, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI38505218, Length=296, Percent_Identity=28.0405405405405, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI211971008, Length=325, Percent_Identity=25.8461538461538, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI48976061, Length=325, Percent_Identity=25.8461538461538, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=30.4461942257218, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1786223, Length=361, Percent_Identity=29.3628808864266, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17506239, Length=369, Percent_Identity=29.810298102981, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71985184, Length=357, Percent_Identity=31.6526610644258, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17508101, Length=386, Percent_Identity=27.979274611399, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17534899, Length=347, Percent_Identity=34.0057636887608, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=29.1777188328912, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17569725, Length=377, Percent_Identity=28.9124668435013, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71990804, Length=314, Percent_Identity=31.8471337579618, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=27.0053475935829, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71985192, Length=292, Percent_Identity=32.5342465753425, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17551932, Length=357, Percent_Identity=26.0504201680672, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17505929, Length=339, Percent_Identity=27.7286135693215, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17533517, Length=362, Percent_Identity=26.7955801104972, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI32563615, Length=251, Percent_Identity=30.2788844621514, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71982178, Length=276, Percent_Identity=27.8985507246377, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17531909, Length=246, Percent_Identity=28.8617886178862, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17534353, Length=306, Percent_Identity=27.1241830065359, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17562446, Length=305, Percent_Identity=26.2295081967213, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=167, Percent_Identity=26.9461077844311, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=276, Percent_Identity=26.4492753623188, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563381, Length=275, Percent_Identity=25.8181818181818, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=32.6315789473684, Blast_Score=187, Evalue=8e-48,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=33.0434782608696, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24660351, Length=372, Percent_Identity=31.1827956989247, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI281363737, Length=344, Percent_Identity=30.8139534883721, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24646207, Length=364, Percent_Identity=30.2197802197802, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI21355753, Length=330, Percent_Identity=30, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI19920834, Length=350, Percent_Identity=27.1428571428571, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42752; Mature: 42621

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEY
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCC
GGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELRL
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEE
QAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRAEYSDLMILLARTTPKDQVQK
EEECCCCCCCCCCCHHHHHHHHCCCCCEEECCHHEECCCCCCCCEEEEEECCCCHHHHHH
RTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYIL
HHCCCEEEEEEHHHHHHCCCEEHHHHHHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHC
SGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAAE
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHHHH
LMVKEATRKYEAGLDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRET
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLYQVAPISTNLILSYVAEHVLGMPRSY
HCEEEECCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDQHQHDDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEEY
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCC
GGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELRL
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEE
QAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRAEYSDLMILLARTTPKDQVQK
EEECCCCCCCCCCCHHHHHHHHCCCCCEEECCHHEECCCCCCCCEEEEEECCCCHHHHHH
RTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYIL
HHCCCEEEEEEHHHHHHCCCEEHHHHHHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHC
SGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAAE
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHHHH
LMVKEATRKYEAGLDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRET
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLYQVAPISTNLILSYVAEHVLGMPRSY
HCEEEECCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]