| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338519
Identifier: 146338519
GI number: 146338519
Start: 1539998
End: 1541719
Strand: Reverse
Name: 146338519
Synonym: BRADO1438
Alternate gene names: NA
Gene position: 1541719-1539998 (Counterclockwise)
Preceding gene: 146338520
Following gene: 146338515
Centisome position: 20.68
GC content: 72.59
Gene sequence:
>1722_bases ATGGCGGACAAGAAGACCCCTCAAACGGCGGCCGGAAAGAGCGAGCTCTATCGGCATGTCAGCATGCTGGCCCTCATGGC CGCGCTGGCAGTCACGGCACTGCCGCACCATGCCAACGCGCAGGCGATGACGACCGCCCTGGCGACCTCCGCCACCACCA GCGCCGCCGCGAAGGCCGCCCAGGATGCCGCCGTGAAGGCCGCGGCCGCCTCTGCCGCCAAGGCGGCCCAGGAGGCGGCA GCCAAGGCCGCCGCGGCTGCTGCCGCCAAGGCCGCTCAGGATGCGGCGGCCAAGGCTGCCGCGAAGGCCGCGACCGACGC GGCCGCCAAGGCTGCTGCGAATGCCGCCGCCAAGGCGGCCTCGACCGCGGCCTCGACCGCGGCCTCCACCGCGGCCGCCA AAGCCGCATCGACCGCGGCGACGACGGCTGCGAGCGCGGCAGCGGCCAAGACCGCCACTGCAGCTGCCGCTGCGACCACC ACGACGGCAGCCGTCAGCACCACCAAGCCCGCCGCTGCAACGACGACGACCGGAACGGCCAAGACCGCCGCCGCAACCAC GACCACCACGACGACGGCCGCGAAGTCGACAGCCACCGCGGCCACAACCACCGTCGCCGTGGCCAAGGCTGCCGCGACGC CTGCCGCCGCTGCCACGCCCGCCAAGGCCGCTGCCGCAGCATCCAGCAGCACGGACGCGGTCGCCAAGGCCAATGCGGCC GCAGCAGCCGCAGCCCAGACCGCAGCGGCCGCCGAGGCCCAGGTCGCCGCCGACCGCAAGGCCATCGACGTCGCGCGTCA AGCCGAGCAGAATGCCAAGGGCGCCGCGATCGAAGCGCAGGAGCAGGCGGAAAAGAATCCGACCGCGGCCAACCAGGCAG CCGCCACGGCGGCGGCCGCCAAGCTGACCGCAGCCTCCGCGGCGCTGCAGGCTGCCTTCCAGAAACTCGACAAGGACATC GACGTCTCCAACGAGGCCAAGGAAGCCGCCAACGCCGCCAAGGATACAGCGCGCGAGACCGCCGAGGCGGCTGGCAAGAC CGCTCAGCAGGCCGGCCAGGCCGCCGGCAACGCCAACAATGGCGGCAATGCCAATAATGGCGGCGCTGCGGCGGGCAATG GCGGCAACGCGAACAACAATAACAACAACCAGCAGAACCAGGAGGCCAAGGAAGCCGCCGAGCAGGCCGCGCTGCAGGCG GCGTTGAAGACCGGCGAGCAGGCCCGCGCGGTCGCGCAGCAGAAGAGCCAGGCCGCGCAGGCCGCAGCCACCCAGAACCA GAAGACGGTCGAGGCCGCGCTCAACCAGAAGATCGGCGCACTCGACGCCGCGGTCGAAACTGCCGAGCAGAAGGTGAACG CCGACCGCCAGGCGCTCGAAAAGGCCCGCCAGGCCGCGCAGCAGGCGACGCAGGACGCGCAGGAAGCCGCCGAGCAGGTC GAGCGCGCCAACACCGCCGCTAACCAGGCCGCATTGGCCGCCGCGCAGGCCAAGGCGCAGACCACTGCGGCCGCCTTCAA CCAGGCCAACGCGACGCTGAACGCCGACAACCAGGCCCTGACCCAGGCCCGCGAGAGCGGCGAACAGCAGGAGCAGGCGC TGCGGGCGGCCGCCCAGCAGCAGATCCAGGCCGGCTACACCGCCGCCCAGCAGGCGACCCAGGCCGCCTGGGCCGAGGCG CAGCAGATCGGCAACGCGGCACTCGCCGCGCTCGAGCAGTAA
Upstream 100 bases:
>100_bases GCCGCCGCCATGCTGCTTGCAAGGTCCGACCATTCTGCAAGCAAAAATCATTATCAAAAGGTTCCATCATCCAATCCAGC GTACCAATGGAGTTGAGCTG
Downstream 100 bases:
>100_bases GGCCCCGGCGTTCCGCGTCGCTCTGTCGTCACCCCCCCTGGAGCGGCGCGGGCCCGATAACGACAACAAGGCCGTCACCA GCGGCATGCCGAGCAGCTGG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MADKKTPQTAAGKSELYRHVSMLALMAALAVTALPHHANAQAMTTALATSATTSAAAKAAQDAAVKAAAASAAKAAQEAA AKAAAAAAAKAAQDAAAKAAAKAATDAAAKAAANAAAKAASTAASTAASTAAAKAASTAATTAASAAAAKTATAAAAATT TTAAVSTTKPAAATTTTGTAKTAAATTTTTTTAAKSTATAATTTVAVAKAAATPAAAATPAKAAAAASSSTDAVAKANAA AAAAAQTAAAAEAQVAADRKAIDVARQAEQNAKGAAIEAQEQAEKNPTAANQAAATAAAAKLTAASAALQAAFQKLDKDI DVSNEAKEAANAAKDTARETAEAAGKTAQQAGQAAGNANNGGNANNGGAAAGNGGNANNNNNNQQNQEAKEAAEQAALQA ALKTGEQARAVAQQKSQAAQAAATQNQKTVEAALNQKIGALDAAVETAEQKVNADRQALEKARQAAQQATQDAQEAAEQV ERANTAANQAALAAAQAKAQTTAAAFNQANATLNADNQALTQARESGEQQEQALRAAAQQQIQAGYTAAQQATQAAWAEA QQIGNAALAALEQ
Sequences:
>Translated_573_residues MADKKTPQTAAGKSELYRHVSMLALMAALAVTALPHHANAQAMTTALATSATTSAAAKAAQDAAVKAAAASAAKAAQEAA AKAAAAAAAKAAQDAAAKAAAKAATDAAAKAAANAAAKAASTAASTAASTAAAKAASTAATTAASAAAAKTATAAAAATT TTAAVSTTKPAAATTTTGTAKTAAATTTTTTTAAKSTATAATTTVAVAKAAATPAAAATPAKAAAAASSSTDAVAKANAA AAAAAQTAAAAEAQVAADRKAIDVARQAEQNAKGAAIEAQEQAEKNPTAANQAAATAAAAKLTAASAALQAAFQKLDKDI DVSNEAKEAANAAKDTARETAEAAGKTAQQAGQAAGNANNGGNANNGGAAAGNGGNANNNNNNQQNQEAKEAAEQAALQA ALKTGEQARAVAQQKSQAAQAAATQNQKTVEAALNQKIGALDAAVETAEQKVNADRQALEKARQAAQQATQDAQEAAEQV ERANTAANQAALAAAQAKAQTTAAAFNQANATLNADNQALTQARESGEQQEQALRAAAQQQIQAGYTAAQQATQAAWAEA QQIGNAALAALEQ >Mature_572_residues ADKKTPQTAAGKSELYRHVSMLALMAALAVTALPHHANAQAMTTALATSATTSAAAKAAQDAAVKAAAASAAKAAQEAAA KAAAAAAAKAAQDAAAKAAAKAATDAAAKAAANAAAKAASTAASTAASTAAAKAASTAATTAASAAAAKTATAAAAATTT TAAVSTTKPAAATTTTGTAKTAAATTTTTTTAAKSTATAATTTVAVAKAAATPAAAATPAKAAAAASSSTDAVAKANAAA AAAAQTAAAAEAQVAADRKAIDVARQAEQNAKGAAIEAQEQAEKNPTAANQAAATAAAAKLTAASAALQAAFQKLDKDID VSNEAKEAANAAKDTARETAEAAGKTAQQAGQAAGNANNGGNANNGGAAAGNGGNANNNNNNQQNQEAKEAAEQAALQAA LKTGEQARAVAQQKSQAAQAAATQNQKTVEAALNQKIGALDAAVETAEQKVNADRQALEKARQAAQQATQDAQEAAEQVE RANTAANQAALAAAQAKAQTTAAAFNQANATLNADNQALTQARESGEQQEQALRAAAQQQIQAGYTAAQQATQAAWAEAQ QIGNAALAALEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55113; Mature: 54982
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKKTPQTAAGKSELYRHVSMLALMAALAVTALPHHANAQAMTTALATSATTSAAAKAA CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QDAAVKAAAASAAKAAQEAAAKAAAAAAAKAAQDAAAKAAAKAATDAAAKAAANAAAKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STAASTAASTAAAKAASTAATTAASAAAAKTATAAAAATTTTAAVSTTKPAAATTTTGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KTAAATTTTTTTAAKSTATAATTTVAVAKAAATPAAAATPAKAAAAASSSTDAVAKANAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHHHHH AAAAAQTAAAAEAQVAADRKAIDVARQAEQNAKGAAIEAQEQAEKNPTAANQAAATAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH KLTAASAALQAAFQKLDKDIDVSNEAKEAANAAKDTARETAEAAGKTAQQAGQAAGNANN HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GGNANNGGAAAGNGGNANNNNNNQQNQEAKEAAEQAALQAALKTGEQARAVAQQKSQAAQ CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAATQNQKTVEAALNQKIGALDAAVETAEQKVNADRQALEKARQAAQQATQDAQEAAEQV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERANTAANQAALAAAQAKAQTTAAAFNQANATLNADNQALTQARESGEQQEQALRAAAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHH QIQAGYTAAQQATQAAWAEAQQIGNAALAALEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADKKTPQTAAGKSELYRHVSMLALMAALAVTALPHHANAQAMTTALATSATTSAAAKAA CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QDAAVKAAAASAAKAAQEAAAKAAAAAAAKAAQDAAAKAAAKAATDAAAKAAANAAAKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STAASTAASTAAAKAASTAATTAASAAAAKTATAAAAATTTTAAVSTTKPAAATTTTGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KTAAATTTTTTTAAKSTATAATTTVAVAKAAATPAAAATPAKAAAAASSSTDAVAKANAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHHHHH AAAAAQTAAAAEAQVAADRKAIDVARQAEQNAKGAAIEAQEQAEKNPTAANQAAATAAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH KLTAASAALQAAFQKLDKDIDVSNEAKEAANAAKDTARETAEAAGKTAQQAGQAAGNANN HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GGNANNGGAAAGNGGNANNNNNNQQNQEAKEAAEQAALQAALKTGEQARAVAQQKSQAAQ CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AAATQNQKTVEAALNQKIGALDAAVETAEQKVNADRQALEKARQAAQQATQDAQEAAEQV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH ERANTAANQAALAAAQAKAQTTAAAFNQANATLNADNQALTQARESGEQQEQALRAAAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHH QIQAGYTAAQQATQAAWAEAQQIGNAALAALEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA