Click here to switch to the map view.

The map label for this gene is ycjF [C]

Identifier: 146338514

GI number: 146338514

Start: 1532216

End: 1533247

Strand: Reverse

Name: ycjF [C]

Synonym: BRADO1432

Alternate gene names: 146338514

Gene position: 1533247-1532216 (Counterclockwise)

Preceding gene: 146338515

Following gene: 146338512

Centisome position: 20.56

GC content: 69.96

Gene sequence:

>1032_bases
ATGAGCGATCGCGCCAAGCCCCGCCGTCCCCAGACCTTCCGGCTCGACGATCCCGACGTCGTGGTGGTCGACGCCGATGA
GGCCGGCCGGCCCGGCCGCGGCACCATCCAGATCACGCCCGAAGCCGATCCGGCGCAACTGCCGGTGCCCGTCGACGTCG
TGCTGCCGGCGCGGCGCGGCTTCCGCTGGGGGGCACTGTTCTGGGGATCGGTCAGCGGCCTCGTCCTGCTCGGGCTGGGC
CTCGGCGTCACCCGTCTGATCGAGGATCTGTTCGCGCGCAGCGAGGCGCTCGGCTATGTCGGCTCCGGCTTTGCCGCGGC
CGCCGCGGTCGCGCTCGCGGCCGTGATCGGGCGCGAGACCTATGGGCTGGTACGGCTGGCCACGATCGAGAAGCTGCATG
CGCGCGCTGCTGCCGTGCTGCTGTCCGATGATCGCGCCGAGAGCCGCGCTGTCATCTCCGAGCTGTTGCGGATCGCCCAT
GCCAATCCGAGACTCGCGCGTCCCCGCGCGGAGCTTGCCGGCCATGCCGACGACATCATCGATGGCGCCGACATGATCAA
GCTCGCCGAGCGCGAGCTGATGACGCCGCTCGACATCGAGGCGCGGCGGCTGGTGTCGGTCGCGGCGCAGCGCGTCTCGG
TGGTCACCGCGGTCAGCCCGCGCGCGATGATCGACGTGCTGTTCGTGTTTGTCGCGAGCCTTCGGATGATCCGCCAGCTG
GCGATGCTCTATGGCGGACGGCCCGGAGCGCTCGGCATGATCAGCCTGCTGCGCCACGTCATTGCGCATCTCGCCATCAC
CGGAGGCATGGCGGCAAGCGACAGCCTGATCCAGCAGGTGCTGGGGCATGGCATTGCCGCCAAGCTGTCGCAGCGGCTTG
GCGAGGGCGTGCTCAATGGCCTGCTGACCGCGCGGCTTGGACTTGCGGCGATCGACGTGACCCGGCCGATGCCGTTCGCG
GCTCTGCCCCGTCCGGCGCTGGCCGATCTTGCCAAGGATCTCCTGCGCAAGCAGGAGAACGAGGAGACATGA

Upstream 100 bases:

>100_bases
TCCGTCCGCCGCTGCTGGCGCCTGACGCTGGCGGCGAGCCGGCGCTGCCCCATATTCGTCTCGACCGCGCCCTTCAGTTC
CTGATCGGAGACCGGCTGCA

Downstream 100 bases:

>100_bases
TCAGCCACGCGGCTTGTTGTCGAGATCGCCGGCGAGCCAGCGCCACTGATAGAAAGGCGAGTCCGGCGGCGGCGACAGCT
CCGGCGTCCAGCCGGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSDRAKPRRPQTFRLDDPDVVVVDADEAGRPGRGTIQITPEADPAQLPVPVDVVLPARRGFRWGALFWGSVSGLVLLGLG
LGVTRLIEDLFARSEALGYVGSGFAAAAAVALAAVIGRETYGLVRLATIEKLHARAAAVLLSDDRAESRAVISELLRIAH
ANPRLARPRAELAGHADDIIDGADMIKLAERELMTPLDIEARRLVSVAAQRVSVVTAVSPRAMIDVLFVFVASLRMIRQL
AMLYGGRPGALGMISLLRHVIAHLAITGGMAASDSLIQQVLGHGIAAKLSQRLGEGVLNGLLTARLGLAAIDVTRPMPFA
ALPRPALADLAKDLLRKQENEET

Sequences:

>Translated_343_residues
MSDRAKPRRPQTFRLDDPDVVVVDADEAGRPGRGTIQITPEADPAQLPVPVDVVLPARRGFRWGALFWGSVSGLVLLGLG
LGVTRLIEDLFARSEALGYVGSGFAAAAAVALAAVIGRETYGLVRLATIEKLHARAAAVLLSDDRAESRAVISELLRIAH
ANPRLARPRAELAGHADDIIDGADMIKLAERELMTPLDIEARRLVSVAAQRVSVVTAVSPRAMIDVLFVFVASLRMIRQL
AMLYGGRPGALGMISLLRHVIAHLAITGGMAASDSLIQQVLGHGIAAKLSQRLGEGVLNGLLTARLGLAAIDVTRPMPFA
ALPRPALADLAKDLLRKQENEET
>Mature_342_residues
SDRAKPRRPQTFRLDDPDVVVVDADEAGRPGRGTIQITPEADPAQLPVPVDVVLPARRGFRWGALFWGSVSGLVLLGLGL
GVTRLIEDLFARSEALGYVGSGFAAAAAVALAAVIGRETYGLVRLATIEKLHARAAAVLLSDDRAESRAVISELLRIAHA
NPRLARPRAELAGHADDIIDGADMIKLAERELMTPLDIEARRLVSVAAQRVSVVTAVSPRAMIDVLFVFVASLRMIRQLA
MLYGGRPGALGMISLLRHVIAHLAITGGMAASDSLIQQVLGHGIAAKLSQRLGEGVLNGLLTARLGLAAIDVTRPMPFAA
LPRPALADLAKDLLRKQENEET

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=301, Percent_Identity=27.2425249169435, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 36522; Mature: 36391

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRAKPRRPQTFRLDDPDVVVVDADEAGRPGRGTIQITPEADPAQLPVPVDVVLPARRG
CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCC
FRWGALFWGSVSGLVLLGLGLGVTRLIEDLFARSEALGYVGSGFAAAAAVALAAVIGRET
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YGLVRLATIEKLHARAAAVLLSDDRAESRAVISELLRIAHANPRLARPRAELAGHADDII
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
DGADMIKLAERELMTPLDIEARRLVSVAAQRVSVVTAVSPRAMIDVLFVFVASLRMIRQL
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AMLYGGRPGALGMISLLRHVIAHLAITGGMAASDSLIQQVLGHGIAAKLSQRLGEGVLNG
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLTARLGLAAIDVTRPMPFAALPRPALADLAKDLLRKQENEET
HHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDRAKPRRPQTFRLDDPDVVVVDADEAGRPGRGTIQITPEADPAQLPVPVDVVLPARRG
CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCC
FRWGALFWGSVSGLVLLGLGLGVTRLIEDLFARSEALGYVGSGFAAAAAVALAAVIGRET
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YGLVRLATIEKLHARAAAVLLSDDRAESRAVISELLRIAHANPRLARPRAELAGHADDII
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
DGADMIKLAERELMTPLDIEARRLVSVAAQRVSVVTAVSPRAMIDVLFVFVASLRMIRQL
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AMLYGGRPGALGMISLLRHVIAHLAITGGMAASDSLIQQVLGHGIAAKLSQRLGEGVLNG
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLTARLGLAAIDVTRPMPFAALPRPALADLAKDLLRKQENEET
HHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]