| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338473
Identifier: 146338473
GI number: 146338473
Start: 1482992
End: 1485097
Strand: Reverse
Name: 146338473
Synonym: BRADO1390
Alternate gene names: NA
Gene position: 1485097-1482992 (Counterclockwise)
Preceding gene: 146338474
Following gene: 146338472
Centisome position: 19.92
GC content: 66.19
Gene sequence:
>2106_bases ATGAGCAACCCTTACGTCGGCATCCAGGTCAATCCATTCGAGGACGCCATCGTCCGCGAGCCGCGCGACGTGACGTTCTC GGTCAACGGGCTCAACGATGCGCCGCTGAACCGCGTGCTCACCAAGTTCGCCGCGCTCGAGGGAGGCGAACTGCCCCGCA GCAGCCCGGTCAAGTCCGATCGCGCCCAGCTGGTCGTGTCGCCGGATCGCGGCTACGGCAAATCGCATCTGCTCGGCCGG CTGTTTACCGCGCTTGGACGCAAGGCCACCAAGGTCTATTTGCGACCGTTCCAGGATCCTTATAAAGCATGGCAGTCGAT CCTGCTGCTCACGCTGCAGGAACTCGACCGTCCCGACGACGGGAGCGCGGAGGCGCCGAGCCAGCTGAGCTCGCTTGCGG TCGGAACCTTGGCGCATATCGTCGCGGACTTTGCTGAGAACGGCGCGCCCGAGATCGCGGCGGCCGTGCCCGCGCTGCGG CGTCTCGCCAGCGGCACGCTGCCTGCGGCCGAGATGCCGGCCCGTCTCGGATGGCTGAGCGCGCTGTTCGCCAGCAACGG ACCGATCAACCGGCTGGCCGGGCTGCTCAGGAGTCGGCACATCGACCTGCATGGGCACGAGAAGGCCTGGCTCAAGATTC TCGTCGCCTGCGCCTTCGATGAGGCCGACGGCGAGCGGCGGCGCGCGGCGCTGAAATGGCTGCGCGCCGAGCCGCTGGAG CCGGAGGAGGTCGAGCAGTTGCGTCTGGACCAGGCCGACAATGACGGCCGCGGCGACGTCACTCCGCAGGAGATCAATGC CCTGAGCTTCGGCAGGCTGCAGGGTCTCTGTCAGCTCGCGTCCTACTACCGGCCCTTCGTGTTCTGCTTCGACCAGACCG AGTGCTACGCCAGCGATGCCTTGCTGATCAAGGCGCTCGGCAATTGTATCGAGCAGCTCTATGCCGAGTTGCGCAACCAC CTCACCGTGGTGACCGCGAACCAGCGCAACTGGGTCGAGGACATCAAGCCGCATCTTGAGCCGGCGCATCGCGACCGCTT CTCGCAGGAGATTGCGCTCGAGGGCATCACCAAGGCCGGCGCGCGCGAGCTGATCGAGAACAGGCTGACGCTGTGCGGCA TGCAGCCCAGGGACGCCGCACGCTTCTTTTCTGACGCGTGGCTGGACGATCTGTTCTCGACGCTGACCGAGCTCGGCGTA CGCGCGCTACTGATGCGCGCGGAGGACCGCTTCACGGCGCTGGCGCGGCCCGATGCGGCGCCCCCTTCGCCGCAAACCCT CGACGATCTCTTCCAGATCGAGCTCAACAATATCCGCTCCCAAAAAGCGCTGCAGGTCTACAATCAGGACTGCCTCATGT GGTTCGCCAAGGATGTCGGCCAGGCCATGACCGGGGTGAAGGCGGGTCGGACCTCAGGGCGGCGCTACTTCTCTTTCGAA TGGCGCTGGCCGGATCGCAGAGTCTACTTCGCTTTCGAAGGCGGCGATCATTGGCGTCGCTGGAAGGCGATTGCCGACGA GGCGATTGCTTTGTCTGGCCCTCAAAGCGGCCGCCCTGCGCTCACCTATGTGTTCCGCACGCCCGACCTCGCCCGCGTGC CGCGGCCGTCCTGGGCGGTCGCCAAGGCGACGATGGACCAGGCGGGCCGCCACGGCTTCCGCATCGTCGAGTTGACGCTC GATCAGGTCTGCGAGTTGCATGCCGCGCGCGAGCTCTATTCCAATGCGCTGCAGGGCAATATCGCATTTTCGGGTCCCGC CACCCTCGCCTGGCTGCAGACACGCTTCGCGCCGTTCCTCGCCGACATCGCCACCGCCGGGATGCCGATCAAGGTGCGCA GCGTCGATGCCGGCGGACCGGCGGCGAACCCGCAGCGCACGACCAGGCAAACGACAGACGCGTCCCACGCACTCGACGGC GACGATCTGCGGACTGTGCTCGACCTCGTCCGCGAGCAGCGCATCGTCGACATCTCCGTCGTGCTCGACAGGCTCGGGCG CAAGGAGCTGCGCGATCCCTTGTTGCGCAGCGTCGAGGCGCATCCCAATCTCAAGGCCCATCCCGGGCCCAAGACCATCT TCCTGCAATGGCGCATCACAGCATAA
Upstream 100 bases:
>100_bases CGACGACGACGGTCGATCTTCCGAAGGAGGAAATGGATGCCGGCATCAAGCTCGCCGGCTTTCCGGAACCTTTCGTGACC GTCGTCGTCAAGAACGATCC
Downstream 100 bases:
>100_bases CGGCGACAGAGCTCACCTTCGCCGTGCTCGATCCCGACTGGCGCGCCAGATGGCTGCGTGGCGAGAAGCCGTCGACCAAG AGCTTCGCGCCGGTCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MSNPYVGIQVNPFEDAIVREPRDVTFSVNGLNDAPLNRVLTKFAALEGGELPRSSPVKSDRAQLVVSPDRGYGKSHLLGR LFTALGRKATKVYLRPFQDPYKAWQSILLLTLQELDRPDDGSAEAPSQLSSLAVGTLAHIVADFAENGAPEIAAAVPALR RLASGTLPAAEMPARLGWLSALFASNGPINRLAGLLRSRHIDLHGHEKAWLKILVACAFDEADGERRRAALKWLRAEPLE PEEVEQLRLDQADNDGRGDVTPQEINALSFGRLQGLCQLASYYRPFVFCFDQTECYASDALLIKALGNCIEQLYAELRNH LTVVTANQRNWVEDIKPHLEPAHRDRFSQEIALEGITKAGARELIENRLTLCGMQPRDAARFFSDAWLDDLFSTLTELGV RALLMRAEDRFTALARPDAAPPSPQTLDDLFQIELNNIRSQKALQVYNQDCLMWFAKDVGQAMTGVKAGRTSGRRYFSFE WRWPDRRVYFAFEGGDHWRRWKAIADEAIALSGPQSGRPALTYVFRTPDLARVPRPSWAVAKATMDQAGRHGFRIVELTL DQVCELHAARELYSNALQGNIAFSGPATLAWLQTRFAPFLADIATAGMPIKVRSVDAGGPAANPQRTTRQTTDASHALDG DDLRTVLDLVREQRIVDISVVLDRLGRKELRDPLLRSVEAHPNLKAHPGPKTIFLQWRITA
Sequences:
>Translated_701_residues MSNPYVGIQVNPFEDAIVREPRDVTFSVNGLNDAPLNRVLTKFAALEGGELPRSSPVKSDRAQLVVSPDRGYGKSHLLGR LFTALGRKATKVYLRPFQDPYKAWQSILLLTLQELDRPDDGSAEAPSQLSSLAVGTLAHIVADFAENGAPEIAAAVPALR RLASGTLPAAEMPARLGWLSALFASNGPINRLAGLLRSRHIDLHGHEKAWLKILVACAFDEADGERRRAALKWLRAEPLE PEEVEQLRLDQADNDGRGDVTPQEINALSFGRLQGLCQLASYYRPFVFCFDQTECYASDALLIKALGNCIEQLYAELRNH LTVVTANQRNWVEDIKPHLEPAHRDRFSQEIALEGITKAGARELIENRLTLCGMQPRDAARFFSDAWLDDLFSTLTELGV RALLMRAEDRFTALARPDAAPPSPQTLDDLFQIELNNIRSQKALQVYNQDCLMWFAKDVGQAMTGVKAGRTSGRRYFSFE WRWPDRRVYFAFEGGDHWRRWKAIADEAIALSGPQSGRPALTYVFRTPDLARVPRPSWAVAKATMDQAGRHGFRIVELTL DQVCELHAARELYSNALQGNIAFSGPATLAWLQTRFAPFLADIATAGMPIKVRSVDAGGPAANPQRTTRQTTDASHALDG DDLRTVLDLVREQRIVDISVVLDRLGRKELRDPLLRSVEAHPNLKAHPGPKTIFLQWRITA >Mature_700_residues SNPYVGIQVNPFEDAIVREPRDVTFSVNGLNDAPLNRVLTKFAALEGGELPRSSPVKSDRAQLVVSPDRGYGKSHLLGRL FTALGRKATKVYLRPFQDPYKAWQSILLLTLQELDRPDDGSAEAPSQLSSLAVGTLAHIVADFAENGAPEIAAAVPALRR LASGTLPAAEMPARLGWLSALFASNGPINRLAGLLRSRHIDLHGHEKAWLKILVACAFDEADGERRRAALKWLRAEPLEP EEVEQLRLDQADNDGRGDVTPQEINALSFGRLQGLCQLASYYRPFVFCFDQTECYASDALLIKALGNCIEQLYAELRNHL TVVTANQRNWVEDIKPHLEPAHRDRFSQEIALEGITKAGARELIENRLTLCGMQPRDAARFFSDAWLDDLFSTLTELGVR ALLMRAEDRFTALARPDAAPPSPQTLDDLFQIELNNIRSQKALQVYNQDCLMWFAKDVGQAMTGVKAGRTSGRRYFSFEW RWPDRRVYFAFEGGDHWRRWKAIADEAIALSGPQSGRPALTYVFRTPDLARVPRPSWAVAKATMDQAGRHGFRIVELTLD QVCELHAARELYSNALQGNIAFSGPATLAWLQTRFAPFLADIATAGMPIKVRSVDAGGPAANPQRTTRQTTDASHALDGD DLRTVLDLVREQRIVDISVVLDRLGRKELRDPLLRSVEAHPNLKAHPGPKTIFLQWRITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78023; Mature: 77891
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPYVGIQVNPFEDAIVREPRDVTFSVNGLNDAPLNRVLTKFAALEGGELPRSSPVKSD CCCCEEEEEECCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RAQLVVSPDRGYGKSHLLGRLFTALGRKATKVYLRPFQDPYKAWQSILLLTLQELDRPDD CCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEHCCCCCCHHHHHHHHHHHHHHHCCCCCC GSAEAPSQLSSLAVGTLAHIVADFAENGAPEIAAAVPALRRLASGTLPAAEMPARLGWLS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALFASNGPINRLAGLLRSRHIDLHGHEKAWLKILVACAFDEADGERRRAALKWLRAEPLE HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC PEEVEQLRLDQADNDGRGDVTPQEINALSFGRLQGLCQLASYYRPFVFCFDQTECYASDA HHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH LLIKALGNCIEQLYAELRNHLTVVTANQRNWVEDIKPHLEPAHRDRFSQEIALEGITKAG HHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ARELIENRLTLCGMQPRDAARFFSDAWLDDLFSTLTELGVRALLMRAEDRFTALARPDAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPSPQTLDDLFQIELNNIRSQKALQVYNQDCLMWFAKDVGQAMTGVKAGRTSGRRYFSFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE WRWPDRRVYFAFEGGDHWRRWKAIADEAIALSGPQSGRPALTYVFRTPDLARVPRPSWAV EECCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCHHH AKATMDQAGRHGFRIVELTLDQVCELHAARELYSNALQGNIAFSGPATLAWLQTRFAPFL HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH ADIATAGMPIKVRSVDAGGPAANPQRTTRQTTDASHALDGDDLRTVLDLVREQRIVDISV HHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH VLDRLGRKELRDPLLRSVEAHPNLKAHPGPKTIFLQWRITA HHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SNPYVGIQVNPFEDAIVREPRDVTFSVNGLNDAPLNRVLTKFAALEGGELPRSSPVKSD CCCEEEEEECCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RAQLVVSPDRGYGKSHLLGRLFTALGRKATKVYLRPFQDPYKAWQSILLLTLQELDRPDD CCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEHCCCCCCHHHHHHHHHHHHHHHCCCCCC GSAEAPSQLSSLAVGTLAHIVADFAENGAPEIAAAVPALRRLASGTLPAAEMPARLGWLS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALFASNGPINRLAGLLRSRHIDLHGHEKAWLKILVACAFDEADGERRRAALKWLRAEPLE HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC PEEVEQLRLDQADNDGRGDVTPQEINALSFGRLQGLCQLASYYRPFVFCFDQTECYASDA HHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH LLIKALGNCIEQLYAELRNHLTVVTANQRNWVEDIKPHLEPAHRDRFSQEIALEGITKAG HHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ARELIENRLTLCGMQPRDAARFFSDAWLDDLFSTLTELGVRALLMRAEDRFTALARPDAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPSPQTLDDLFQIELNNIRSQKALQVYNQDCLMWFAKDVGQAMTGVKAGRTSGRRYFSFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE WRWPDRRVYFAFEGGDHWRRWKAIADEAIALSGPQSGRPALTYVFRTPDLARVPRPSWAV EECCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCHHH AKATMDQAGRHGFRIVELTLDQVCELHAARELYSNALQGNIAFSGPATLAWLQTRFAPFL HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH ADIATAGMPIKVRSVDAGGPAANPQRTTRQTTDASHALDGDDLRTVLDLVREQRIVDISV HHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH VLDRLGRKELRDPLLRSVEAHPNLKAHPGPKTIFLQWRITA HHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA