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The map label for this gene is yddE [C]

Identifier: 146338431

GI number: 146338431

Start: 1433085

End: 1433942

Strand: Reverse

Name: yddE [C]

Synonym: BRADO1346

Alternate gene names: 146338431

Gene position: 1433942-1433085 (Counterclockwise)

Preceding gene: 146338432

Following gene: 146338429

Centisome position: 19.23

GC content: 67.48

Gene sequence:

>858_bases
GTGATCGGGGAGAACACTGCAATGCCGACACTTCCGTTCTTTCAAGTCGACGTGTTCTCCAAGGTGGCCTTCAAGGGCAA
CCCGCTTGCCGTGATCGCCGAGGCCGACGGCCTCGACGATGCGGCGATGCAGACGATCGCCAATTGGACCAATCTGTCCG
AAACGACCTTCTTGTCGCGTGCCCAGGATCCAGGCGCTGATTACCGCGTGCGCATCTTCACGCCGCAGCGCGAGCTGCCG
TTTGCCGGTCATCCGACGCTCGGCTCGGCCCATGCCTGGCTCGCGCTCGGGGGCCGGCCGAAGGGCGAGCACGTGGTGCA
GGAATGCTTCGCGGGCCTCGTGCGCATCAAGCGTGACGGCGATCGTCTCGCCTTCGCCGCTCCGCCGCTTCGACGGACAG
GCGCCGTCGACGCGGAGCTGACAGCCAAGATCGCAGCCGCGCTCGGCATCAAGGCTGAGGCGATGCGCGCCGTGCAGTGG
GCCGATAACGGCCCGGGCTGGATCGCCGTGCTCATGGACTCGCGCCAGGATCTGCTGAACATCAAGTTCAACGTGCTGGC
ACTGTCGCAGCAGCCGGTCGGCGTCGTTGCGCCGTGGGATCCCGCGACGGACGGGCGCGATGCGCATTACGAGGTCCGCG
CTTTCACCTGGAGCGGCGCCGAGGACCCGGTGACGGGCAGCCTCAATGCAAGTCTGGCGCAATGGCTGATCGGCGCCGGA
ATTGCTCCGAAGCACTACATCGCGTCCCAGGGCGCCGCGCTCGGCCGCGCCGGCCGCGTTCACGTCGCCCAGGACGGCGG
GACCATCTGGATCGGCGGCGACGTCGCCCCGGTGGTGAAAGGCACGATCAGCCTGTAG

Upstream 100 bases:

>100_bases
GAGCTCGCGCTGCTCGACAACGAGCAGATGCGCGACTGCGGCCTCGATCCGACCCTGGTCCACGAAGAGGCCAACAAGCC
GTTCTGGCGCGACTGACAAG

Downstream 100 bases:

>100_bases
GCCGCGAGCGACGCGCTCTCACCGCGCCCGCGTCAGCGCCAGCCACAGGCCGCCGCCGATCATGAAGCCGCCGGAGATGC
GCGACACCAGGCGGGTGCGT

Product: putative phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MIGENTAMPTLPFFQVDVFSKVAFKGNPLAVIAEADGLDDAAMQTIANWTNLSETTFLSRAQDPGADYRVRIFTPQRELP
FAGHPTLGSAHAWLALGGRPKGEHVVQECFAGLVRIKRDGDRLAFAAPPLRRTGAVDAELTAKIAAALGIKAEAMRAVQW
ADNGPGWIAVLMDSRQDLLNIKFNVLALSQQPVGVVAPWDPATDGRDAHYEVRAFTWSGAEDPVTGSLNASLAQWLIGAG
IAPKHYIASQGAALGRAGRVHVAQDGGTIWIGGDVAPVVKGTISL

Sequences:

>Translated_285_residues
MIGENTAMPTLPFFQVDVFSKVAFKGNPLAVIAEADGLDDAAMQTIANWTNLSETTFLSRAQDPGADYRVRIFTPQRELP
FAGHPTLGSAHAWLALGGRPKGEHVVQECFAGLVRIKRDGDRLAFAAPPLRRTGAVDAELTAKIAAALGIKAEAMRAVQW
ADNGPGWIAVLMDSRQDLLNIKFNVLALSQQPVGVVAPWDPATDGRDAHYEVRAFTWSGAEDPVTGSLNASLAQWLIGAG
IAPKHYIASQGAALGRAGRVHVAQDGGTIWIGGDVAPVVKGTISL
>Mature_285_residues
MIGENTAMPTLPFFQVDVFSKVAFKGNPLAVIAEADGLDDAAMQTIANWTNLSETTFLSRAQDPGADYRVRIFTPQRELP
FAGHPTLGSAHAWLALGGRPKGEHVVQECFAGLVRIKRDGDRLAFAAPPLRRTGAVDAELTAKIAAALGIKAEAMRAVQW
ADNGPGWIAVLMDSRQDLLNIKFNVLALSQQPVGVVAPWDPATDGRDAHYEVRAFTWSGAEDPVTGSLNASLAQWLIGAG
IAPKHYIASQGAALGRAGRVHVAQDGGTIWIGGDVAPVVKGTISL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Homo sapiens, GI62177133, Length=293, Percent_Identity=29.3515358361775, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI74316009, Length=241, Percent_Identity=29.4605809128631, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1787737, Length=277, Percent_Identity=28.158844765343, Blast_Score=85, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321818, Length=293, Percent_Identity=34.4709897610922, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30237; Mature: 30237

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGENTAMPTLPFFQVDVFSKVAFKGNPLAVIAEADGLDDAAMQTIANWTNLSETTFLSR
CCCCCCCCCCCCEEEEEHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHC
AQDPGADYRVRIFTPQRELPFAGHPTLGSAHAWLALGGRPKGEHVVQECFAGLVRIKRDG
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEECCC
DRLAFAAPPLRRTGAVDAELTAKIAAALGIKAEAMRAVQWADNGPGWIAVLMDSRQDLLN
CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEEEEECCCCCEEE
IKFNVLALSQQPVGVVAPWDPATDGRDAHYEVRAFTWSGAEDPVTGSLNASLAQWLIGAG
EEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCC
IAPKHYIASQGAALGRAGRVHVAQDGGTIWIGGDVAPVVKGTISL
CCCHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCHHHHEEEECC
>Mature Secondary Structure
MIGENTAMPTLPFFQVDVFSKVAFKGNPLAVIAEADGLDDAAMQTIANWTNLSETTFLSR
CCCCCCCCCCCCEEEEEHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHC
AQDPGADYRVRIFTPQRELPFAGHPTLGSAHAWLALGGRPKGEHVVQECFAGLVRIKRDG
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEECCC
DRLAFAAPPLRRTGAVDAELTAKIAAALGIKAEAMRAVQWADNGPGWIAVLMDSRQDLLN
CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEEEEECCCCCEEE
IKFNVLALSQQPVGVVAPWDPATDGRDAHYEVRAFTWSGAEDPVTGSLNASLAQWLIGAG
EEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCC
IAPKHYIASQGAALGRAGRVHVAQDGGTIWIGGDVAPVVKGTISL
CCCHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]