| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338416
Identifier: 146338416
GI number: 146338416
Start: 1420639
End: 1421061
Strand: Reverse
Name: 146338416
Synonym: BRADO1331
Alternate gene names: NA
Gene position: 1421061-1420639 (Counterclockwise)
Preceding gene: 146338418
Following gene: 146338415
Centisome position: 19.06
GC content: 69.03
Gene sequence:
>423_bases ATGACCAGCGAATATGAGGTCTTGACCGCGCTCGCGGGCGGCGTCCTGATCGGGATCGCGGCCGTTCTGATGATGGGCCT GACAGGCCGGATCGCCGGAGTGAGCGGGATCGCCGCCCGGCTGCTGCCGCCTTGGGATGGCACGCTCGCCGGCCGGTTCG CCTTCATCGGCGGCCTGATCGCCGCAACCCTGATGGTGCGGCTCGCGACGGGCAGCCTGCCGCCTCTGCGTCTCCAGGCC GGCCCGATGGCACTCGTGCTGGCGGGATTGCTGGTCGGCTTCGGCGCGGTCTGGGGCAATGGCTGCACCTCTGGCCATGG CGTCTGCGGCATTGCCAGCCTGTCGCCGCGTTCCATCCTGGCCACGCTGGTGTTCATGGCCACCGCGGTCGCAACCACTT TCCTCGTCCGGCATGTGATGTGA
Upstream 100 bases:
>100_bases CGCACTGTCATGATTGTTACTTCTCAGATTTCGCATATAAGAACTAATGCATATGACTGTGGATTGCAACGTTCGCGGAC CGCGAGGACCTGAAAGCATT
Downstream 100 bases:
>100_bases TGCCGATATGATCATCCTGATCCAGTTCATCATCGGACTTGTCGTCGGACTTGGGCTGCTGCTCTCCGGCATGTCCAATC CGGAAAGAGTGCTGAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTSEYEVLTALAGGVLIGIAAVLMMGLTGRIAGVSGIAARLLPPWDGTLAGRFAFIGGLIAATLMVRLATGSLPPLRLQA GPMALVLAGLLVGFGAVWGNGCTSGHGVCGIASLSPRSILATLVFMATAVATTFLVRHVM
Sequences:
>Translated_140_residues MTSEYEVLTALAGGVLIGIAAVLMMGLTGRIAGVSGIAARLLPPWDGTLAGRFAFIGGLIAATLMVRLATGSLPPLRLQA GPMALVLAGLLVGFGAVWGNGCTSGHGVCGIASLSPRSILATLVFMATAVATTFLVRHVM >Mature_139_residues TSEYEVLTALAGGVLIGIAAVLMMGLTGRIAGVSGIAARLLPPWDGTLAGRFAFIGGLIAATLMVRLATGSLPPLRLQAG PMALVLAGLLVGFGAVWGNGCTSGHGVCGIASLSPRSILATLVFMATAVATTFLVRHVM
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14076; Mature: 13945
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEYEVLTALAGGVLIGIAAVLMMGLTGRIAGVSGIAARLLPPWDGTLAGRFAFIGGLI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AATLMVRLATGSLPPLRLQAGPMALVLAGLLVGFGAVWGNGCTSGHGVCGIASLSPRSIL HHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHH ATLVFMATAVATTFLVRHVM HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSEYEVLTALAGGVLIGIAAVLMMGLTGRIAGVSGIAARLLPPWDGTLAGRFAFIGGLI CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AATLMVRLATGSLPPLRLQAGPMALVLAGLLVGFGAVWGNGCTSGHGVCGIASLSPRSIL HHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHH ATLVFMATAVATTFLVRHVM HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]