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The map label for this gene is ybcL [H]

Identifier: 146338411

GI number: 146338411

Start: 1416796

End: 1417956

Strand: Reverse

Name: ybcL [H]

Synonym: BRADO1326

Alternate gene names: 146338411

Gene position: 1417956-1416796 (Counterclockwise)

Preceding gene: 146338413

Following gene: 146338410

Centisome position: 19.02

GC content: 66.93

Gene sequence:

>1161_bases
ATGCTGGTGATCTGGCTGGCTTTGGCGACGTTCGCGATCGGGACCGAAGCGTTCGTGATCGCGGGCTTGTTGCCCGCGAT
CTCCGCCGATCTTGGAATCTCACCAGCCACCGCGGGTCAGCTGGTGACCGCCTATTCCCTGGCCTATGCGATCGGCTCGC
CCCTGCTCGCCGTGGTCCTCAACAATGTCGACCGCAAGACGGTGCTGATCCTGGCGCTCGCCGTCTTCATCGCGAGCAAC
CTACTCGCTGTCATCGCGCCAGGCTATCCGCTGCTGATCATCTCACGCGTTCTCATGGCCCTCGGCGCCGGGCTTTGCAC
GCCGACTGCGATCGGCGTTGCGGTGGCGATCTCGGCACCGGAGCGGCGCGGCCGCGCCGTCGCGCTGGTGACCTCGGGCC
TCACCGTCGCAACGGTGATCGGCGTCCCGCTCGGCACCTTCGTCGGGAGCCAGGCGTCCTGGCGCGCGACCTTCGCTCTG
GTGGCGGCGCTCGGCGCCCTCGCCCTGATCGGCGTGCTCCTGCGGGTGCCGGCCAAGCTGCCCCATGCGGCTCCGAGCCT
CGGCAGCCGCCTTGCGATCGCTCGCCATGCCTCCGTCATCTATGCGGTTGTAACGACGATGCTGTGGGCGATCGGCGGCC
TGACCGTCTTCACCTATCTGGCGGTTCCGCTGCACGGTCTCGGCTTCACCACCAATCAGATCAGCGTGGCACTCCTGGTA
TTCGGCTCCGCCGCCGCGGTGGGCAACGTCCTCGGCGGAATCTTGGCCGATCGCATTGGGCCGACCCCGACAATGGCATT
GAGCCTCGCCGGCATGGCCGCAGCACTTGGCATGCTGTCGGTGACGGTGAAAACGGCCTCTCCTGAGCTGAGCCATGTCC
TCGTGCTGGTGCCGATCGGCGTCTGGGGTCTCTGCGGCTGGAGCTTCTTTCCGGCTCAGGCGGCGAGCTTGATCCGGATC
GAGCCTCAGGCTGCGACAGTTGCGCTGTCGCTCAACTCCTCGTTCATGTATTTCGGCTTCGCCCTTGGCGGTGCGCTCGG
GGGAATCGTGCTCTCGACCGCCGCGCCGGCCGATCTCGGTTGGGTAGGCGGCCTCAGCGTCGGCGCCGGGCTGGCGGTTC
TCATCCTCCGACACCGTCGCGAGCGATTGAAACCGGTATAA

Upstream 100 bases:

>100_bases
CAACGACATCGGCCTCAATGTTCAATATCTATTGAACCAATTGACAAACGTGCATGATCGGCCAATAGTTCAATAAATAT
TGAACAATGGGCGATGAACG

Downstream 100 bases:

>100_bases
AATTGCCCGTTGATGAGGACGTAAGGCTCTTTCCGGCTTGGATAAACTGGTCTAAAGACCCCTCGCGCGCGAGCACCGGT
CGCGCCTGGGCCTTCGGGGA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLVIWLALATFAIGTEAFVIAGLLPAISADLGISPATAGQLVTAYSLAYAIGSPLLAVVLNNVDRKTVLILALAVFIASN
LLAVIAPGYPLLIISRVLMALGAGLCTPTAIGVAVAISAPERRGRAVALVTSGLTVATVIGVPLGTFVGSQASWRATFAL
VAALGALALIGVLLRVPAKLPHAAPSLGSRLAIARHASVIYAVVTTMLWAIGGLTVFTYLAVPLHGLGFTTNQISVALLV
FGSAAAVGNVLGGILADRIGPTPTMALSLAGMAAALGMLSVTVKTASPELSHVLVLVPIGVWGLCGWSFFPAQAASLIRI
EPQAATVALSLNSSFMYFGFALGGALGGIVLSTAAPADLGWVGGLSVGAGLAVLILRHRRERLKPV

Sequences:

>Translated_386_residues
MLVIWLALATFAIGTEAFVIAGLLPAISADLGISPATAGQLVTAYSLAYAIGSPLLAVVLNNVDRKTVLILALAVFIASN
LLAVIAPGYPLLIISRVLMALGAGLCTPTAIGVAVAISAPERRGRAVALVTSGLTVATVIGVPLGTFVGSQASWRATFAL
VAALGALALIGVLLRVPAKLPHAAPSLGSRLAIARHASVIYAVVTTMLWAIGGLTVFTYLAVPLHGLGFTTNQISVALLV
FGSAAAVGNVLGGILADRIGPTPTMALSLAGMAAALGMLSVTVKTASPELSHVLVLVPIGVWGLCGWSFFPAQAASLIRI
EPQAATVALSLNSSFMYFGFALGGALGGIVLSTAAPADLGWVGGLSVGAGLAVLILRHRRERLKPV
>Mature_386_residues
MLVIWLALATFAIGTEAFVIAGLLPAISADLGISPATAGQLVTAYSLAYAIGSPLLAVVLNNVDRKTVLILALAVFIASN
LLAVIAPGYPLLIISRVLMALGAGLCTPTAIGVAVAISAPERRGRAVALVTSGLTVATVIGVPLGTFVGSQASWRATFAL
VAALGALALIGVLLRVPAKLPHAAPSLGSRLAIARHASVIYAVVTTMLWAIGGLTVFTYLAVPLHGLGFTTNQISVALLV
FGSAAAVGNVLGGILADRIGPTPTMALSLAGMAAALGMLSVTVKTASPELSHVLVLVPIGVWGLCGWSFFPAQAASLIRI
EPQAATVALSLNSSFMYFGFALGGALGGIVLSTAAPADLGWVGGLSVGAGLAVLILRHRRERLKPV

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=330, Percent_Identity=30.9090909090909, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1786595, Length=260, Percent_Identity=27.6923076923077, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787808, Length=156, Percent_Identity=32.0512820512821, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI145693198, Length=273, Percent_Identity=25.2747252747253, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 38981; Mature: 38981

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIWLALATFAIGTEAFVIAGLLPAISADLGISPATAGQLVTAYSLAYAIGSPLLAVVL
CEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
NNVDRKTVLILALAVFIASNLLAVIAPGYPLLIISRVLMALGAGLCTPTAIGVAVAISAP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECC
ERRGRAVALVTSGLTVATVIGVPLGTFVGSQASWRATFALVAALGALALIGVLLRVPAKL
CCCCCEEEEEECCCCEEHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PHAAPSLGSRLAIARHASVIYAVVTTMLWAIGGLTVFTYLAVPLHGLGFTTNQISVALLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEE
FGSAAAVGNVLGGILADRIGPTPTMALSLAGMAAALGMLSVTVKTASPELSHVLVLVPIG
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEEEHH
VWGLCGWSFFPAQAASLIRIEPQAATVALSLNSSFMYFGFALGGALGGIVLSTAAPADLG
HHHHCCCCCCHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
WVGGLSVGAGLAVLILRHRRERLKPV
CCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLVIWLALATFAIGTEAFVIAGLLPAISADLGISPATAGQLVTAYSLAYAIGSPLLAVVL
CEEHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
NNVDRKTVLILALAVFIASNLLAVIAPGYPLLIISRVLMALGAGLCTPTAIGVAVAISAP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECC
ERRGRAVALVTSGLTVATVIGVPLGTFVGSQASWRATFALVAALGALALIGVLLRVPAKL
CCCCCEEEEEECCCCEEHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PHAAPSLGSRLAIARHASVIYAVVTTMLWAIGGLTVFTYLAVPLHGLGFTTNQISVALLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEE
FGSAAAVGNVLGGILADRIGPTPTMALSLAGMAAALGMLSVTVKTASPELSHVLVLVPIG
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEEEHH
VWGLCGWSFFPAQAASLIRIEPQAATVALSLNSSFMYFGFALGGALGGIVLSTAAPADLG
HHHHCCCCCCHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
WVGGLSVGAGLAVLILRHRRERLKPV
CCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]