| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337924
Identifier: 146337924
GI number: 146337924
Start: 862019
End: 863821
Strand: Reverse
Name: 146337924
Synonym: BRADO0813
Alternate gene names: NA
Gene position: 863821-862019 (Counterclockwise)
Preceding gene: 146337926
Following gene: 146337921
Centisome position: 11.58
GC content: 63.06
Gene sequence:
>1803_bases TTGTCGGCCATCACAATGCCGCTTCCCGTCAACGCGATCTGGTTTCCAGCCGCCAGGACGCTCCTGATATCCAGAAACGG CGCGGACAGTCCGGCCTTTTTTTGCGAATTTGAGCAGGTCGATCAGCTCGGACCGAGAGCGTCAGGCGCACGCCGGCGCT ACTGGAAGCTTCCCGAAGAAAGCGTGACGAAGCTGGTCGCTGTCGATGAAAACGCAACATCTGAACTTCTTGGCGCACCG GATGGCGGGACGATACCGCTCGCGCTGGATGCGACGTTCGGCGCTCAGAACAATCTGCTTCTGGTGTCGTACAGGAAAGA TAGCGGCGCAGCGCCGGTCCTGCAGCTCAAATTCCTTGCTAACGATACCAGCTTTGCCGATGCGAGCGAGCTGCACCGCC ATGCACGCGACACTCTCGGACTTGGACAAAAGGACCATGTCGAGGGCATCTGGACATCCTCGATGACGCGCGACGAAAAT GGCGTTCGCATCGGTCCCGCGCGACTTGCCTGGCCTTATGGCACGGCACGATTGATCGAGGTCCAGCCGCCCTCCACGAT CGATCTGCTGTCGGAGCTCGAATTGACGGCGCGTACCGATCACTACGTCGGTCAATCCGGCGATTTGCGATCCATTGTCC AGCTGTCATTGGGCGCCCCCAATGCCGCTGTCTTGCTGGTGTGGCGAAGCATTTTCGCCGGTCGGCTGGCCACCAACACG CCGAACCCTTTTCTGCAGTCTCTCGAGACCAATGTTGCGCAATATCTTGGCTGGTCGATCCCGTTCAACAGAATTCCTCC CGCCGTGAGCGCGACCGAACAGCCGACCGCGCGGGGCTACTTCCTGCCGAAATCCGGCATTCAATCCGAACTGATGCCGC CGGGACAGAAGCTGACACTGACGTTCCACGGACCGCTCGACATCGACGATGTCGCCATGCTCTGCATCTGCTCGCAGCCC GGCGAGCAGATCACCATCACCCGGCGCCCGGAAGGGGCACCACCGCCGCACCGTCCTGATGATGAGAACCTGCGACCCCA GATCCTCTGCTGGCGCGCCACGATCCACGGCCTGGTGCCGCTGGCTTGGAATGACATCGAGCCGAAGGTCCGCGCAGCCT TGACGGAGCGGCTGGAGTCAGAGCTGCCCAGAACAGGGCCTGGTGCCGCCGCGGCGTCGCCGACAAGCTGGGCGAACGGC AGTGCGGAGACACAAGCGAGGTCGGCCGCGCCACGGGGCACGCTCGTCGACCCGTCATCGCTGTTCAGCGTCAGCGATGA GCTCCGCAGCATCCTCGACGAATGGTTTGCCACGCTCGATCCGAAGATCGTCGGACGACTCTGCGCGGTCAGCGCCGGCG AGCCAATCCCGTTCACCAATATCGCACGGCTTCTTCCCGTCGCCATCGAGGGCATGCTCAGCGTTCCCTCCAATTGGACG GTGTTCGAACGCGACGCCGAGGCGCTCCAGAAGCAGGCGGCGACCATTCAACATCTGCTGGATCCCACGACAGGGCCGCC GCCTGGTCACCTGCGCGGCAATACCCGCCTCTGGCGTTCGATCAGGCAAGCGATGCAGGAGCAGCCGATCTTCGATGAAA CACAGATCCGGCTGATCGACGCGATGCTGCCGACTGCGGCCGGATCACTCCCAAGACTCGATCCCGGCGACTTTCACAAG ATCGCCCACCTGCTCGGCCACCTCGCCCAAAGCCACCTGCGGAGATCCGCAGCTGGCAATCTCGCGGACACCGCTTCCGC CGCGCCCGAAGCCGGTGTCGAAAGCCCCGGCGCGCAGGCGTAG
Upstream 100 bases:
>100_bases TCTTCTCTCTAGAGCGCCGTTACTGCCAAATTGCCGCTTCCCGCTTGAATTGTAACAGAATAGACTTCAACTGTCGTCCG CCGTTTCAATATCAGCGAAC
Downstream 100 bases:
>100_bases GTGCCGTTTCGAGAGCGACACTGCGGGATGCGTCGACGCTCCCCCATACGCGCGACCCCGTGGGCGATAGGGTCAACCTG CGGCGACCTCCCGACCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSAITMPLPVNAIWFPAARTLLISRNGADSPAFFCEFEQVDQLGPRASGARRRYWKLPEESVTKLVAVDENATSELLGAP DGGTIPLALDATFGAQNNLLLVSYRKDSGAAPVLQLKFLANDTSFADASELHRHARDTLGLGQKDHVEGIWTSSMTRDEN GVRIGPARLAWPYGTARLIEVQPPSTIDLLSELELTARTDHYVGQSGDLRSIVQLSLGAPNAAVLLVWRSIFAGRLATNT PNPFLQSLETNVAQYLGWSIPFNRIPPAVSATEQPTARGYFLPKSGIQSELMPPGQKLTLTFHGPLDIDDVAMLCICSQP GEQITITRRPEGAPPPHRPDDENLRPQILCWRATIHGLVPLAWNDIEPKVRAALTERLESELPRTGPGAAAASPTSWANG SAETQARSAAPRGTLVDPSSLFSVSDELRSILDEWFATLDPKIVGRLCAVSAGEPIPFTNIARLLPVAIEGMLSVPSNWT VFERDAEALQKQAATIQHLLDPTTGPPPGHLRGNTRLWRSIRQAMQEQPIFDETQIRLIDAMLPTAAGSLPRLDPGDFHK IAHLLGHLAQSHLRRSAAGNLADTASAAPEAGVESPGAQA
Sequences:
>Translated_600_residues MSAITMPLPVNAIWFPAARTLLISRNGADSPAFFCEFEQVDQLGPRASGARRRYWKLPEESVTKLVAVDENATSELLGAP DGGTIPLALDATFGAQNNLLLVSYRKDSGAAPVLQLKFLANDTSFADASELHRHARDTLGLGQKDHVEGIWTSSMTRDEN GVRIGPARLAWPYGTARLIEVQPPSTIDLLSELELTARTDHYVGQSGDLRSIVQLSLGAPNAAVLLVWRSIFAGRLATNT PNPFLQSLETNVAQYLGWSIPFNRIPPAVSATEQPTARGYFLPKSGIQSELMPPGQKLTLTFHGPLDIDDVAMLCICSQP GEQITITRRPEGAPPPHRPDDENLRPQILCWRATIHGLVPLAWNDIEPKVRAALTERLESELPRTGPGAAAASPTSWANG SAETQARSAAPRGTLVDPSSLFSVSDELRSILDEWFATLDPKIVGRLCAVSAGEPIPFTNIARLLPVAIEGMLSVPSNWT VFERDAEALQKQAATIQHLLDPTTGPPPGHLRGNTRLWRSIRQAMQEQPIFDETQIRLIDAMLPTAAGSLPRLDPGDFHK IAHLLGHLAQSHLRRSAAGNLADTASAAPEAGVESPGAQA >Mature_599_residues SAITMPLPVNAIWFPAARTLLISRNGADSPAFFCEFEQVDQLGPRASGARRRYWKLPEESVTKLVAVDENATSELLGAPD GGTIPLALDATFGAQNNLLLVSYRKDSGAAPVLQLKFLANDTSFADASELHRHARDTLGLGQKDHVEGIWTSSMTRDENG VRIGPARLAWPYGTARLIEVQPPSTIDLLSELELTARTDHYVGQSGDLRSIVQLSLGAPNAAVLLVWRSIFAGRLATNTP NPFLQSLETNVAQYLGWSIPFNRIPPAVSATEQPTARGYFLPKSGIQSELMPPGQKLTLTFHGPLDIDDVAMLCICSQPG EQITITRRPEGAPPPHRPDDENLRPQILCWRATIHGLVPLAWNDIEPKVRAALTERLESELPRTGPGAAAASPTSWANGS AETQARSAAPRGTLVDPSSLFSVSDELRSILDEWFATLDPKIVGRLCAVSAGEPIPFTNIARLLPVAIEGMLSVPSNWTV FERDAEALQKQAATIQHLLDPTTGPPPGHLRGNTRLWRSIRQAMQEQPIFDETQIRLIDAMLPTAAGSLPRLDPGDFHKI AHLLGHLAQSHLRRSAAGNLADTASAAPEAGVESPGAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64825; Mature: 64694
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITMPLPVNAIWFPAARTLLISRNGADSPAFFCEFEQVDQLGPRASGARRRYWKLPEE CCEEECCCCCCEEECCCEEEEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCHHHCCCCHH SVTKLVAVDENATSELLGAPDGGTIPLALDATFGAQNNLLLVSYRKDSGAAPVLQLKFLA HHHEEEEECCCCHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEE NDTSFADASELHRHARDTLGLGQKDHVEGIWTSSMTRDENGVRIGPARLAWPYGTARLIE CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCEEECCCCCEEEEE VQPPSTIDLLSELELTARTDHYVGQSGDLRSIVQLSLGAPNAAVLLVWRSIFAGRLATNT ECCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCC PNPFLQSLETNVAQYLGWSIPFNRIPPAVSATEQPTARGYFLPKSGIQSELMPPGQKLTL CCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCEEEE TFHGPLDIDDVAMLCICSQPGEQITITRRPEGAPPPHRPDDENLRPQILCWRATIHGLVP EEECCCCHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCE LAWNDIEPKVRAALTERLESELPRTGPGAAAASPTSWANGSAETQARSAAPRGTLVDPSS EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHH LFSVSDELRSILDEWFATLDPKIVGRLCAVSAGEPIPFTNIARLLPVAIEGMLSVPSNWT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE VFERDAEALQKQAATIQHLLDPTTGPPPGHLRGNTRLWRSIRQAMQEQPIFDETQIRLID EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH AMLPTAAGSLPRLDPGDFHKIAHLLGHLAQSHLRRSAAGNLADTASAAPEAGVESPGAQA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAITMPLPVNAIWFPAARTLLISRNGADSPAFFCEFEQVDQLGPRASGARRRYWKLPEE CEEECCCCCCEEECCCEEEEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCHHHCCCCHH SVTKLVAVDENATSELLGAPDGGTIPLALDATFGAQNNLLLVSYRKDSGAAPVLQLKFLA HHHEEEEECCCCHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEE NDTSFADASELHRHARDTLGLGQKDHVEGIWTSSMTRDENGVRIGPARLAWPYGTARLIE CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCEEECCCCCEEEEE VQPPSTIDLLSELELTARTDHYVGQSGDLRSIVQLSLGAPNAAVLLVWRSIFAGRLATNT ECCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCC PNPFLQSLETNVAQYLGWSIPFNRIPPAVSATEQPTARGYFLPKSGIQSELMPPGQKLTL CCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCEEEE TFHGPLDIDDVAMLCICSQPGEQITITRRPEGAPPPHRPDDENLRPQILCWRATIHGLVP EEECCCCHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCE LAWNDIEPKVRAALTERLESELPRTGPGAAAASPTSWANGSAETQARSAAPRGTLVDPSS EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHH LFSVSDELRSILDEWFATLDPKIVGRLCAVSAGEPIPFTNIARLLPVAIEGMLSVPSNWT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE VFERDAEALQKQAATIQHLLDPTTGPPPGHLRGNTRLWRSIRQAMQEQPIFDETQIRLID EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH AMLPTAAGSLPRLDPGDFHKIAHLLGHLAQSHLRRSAAGNLADTASAAPEAGVESPGAQA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA