| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is engB [H]
Identifier: 146337895
GI number: 146337895
Start: 825720
End: 826379
Strand: Reverse
Name: engB [H]
Synonym: BRADO0781
Alternate gene names: 146337895
Gene position: 826379-825720 (Counterclockwise)
Preceding gene: 146337896
Following gene: 146337894
Centisome position: 11.08
GC content: 67.12
Gene sequence:
>660_bases ATGACCACGAGCAGCGACATCGACGAGCGCCTGATCGAGAAGGGCCGCAAGCTGTTCGCGCAGGCGTGGCGGTTCACCCA TGCCTCGCCGTCGATCGCCAGCCTGCCGCCGATGGGGCCAATCGAGATCGCCTTCGCCGGTCGCTCCAATGTCGGCAAAT CCAGCCTGATCAACGCCCTGACCGGACAGAACGCGCTGGCGCGAACCTCGCATACGCCCGGCCGCACGCAGGAGCTGATC TTCTTCCAGGGCCCCGATTCGGCACCGCTGCGGCTGGTCGACATGCCCGGCTACGGCTATGCCGCCGCCGCCAAGACCAA GGTCGCGTCCTGGACCGAGCTGATCCACCAGTTCCTGCTTGGCCGCGCTTCGCTCGCCCGCGTCTATGTGCTGATCGACG CCCGTCACGGGCTCAAGGAGGTCGATCAGGAGATTCTCAAAACGCTCGACAGATCCGCCGTCAGCTATCAGCTCGTCCTG ACCAAGGCCGACCAGATCAAGCCGGCCGAGCTCGCCAGCCGCATTGCCGAGACGGAGACGGCGCTCGCCAAACATCCGGC GGCGTTTCCGCAGGTGCTAGCGACGTCGTCGCGCTCCGGCACGGGAATGCCGGAGCTGCGCGCCGCGATGGTCCGCCTGC TGGAGGAGCGCGGCGCATGA
Upstream 100 bases:
>100_bases TCATGGCCGGGCTCGTTCCGGCCATCCACGTCTTGAGAGCCACGCACAGCAGCGTGGATGCCCGGGTCAAGCGCGGGCAT GACGGAGGCCTAAGCCTGTC
Downstream 100 bases:
>100_bases CGCCATGGCGCGTTTTGGTCGCCCTGGCCGGGCTGATGGGCGCCGCCGGTGTCGCGCTGGCGGCCAAGGCCGCGCATGAC GCCGACGCGTCGCGGCTCGC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTTSSDIDERLIEKGRKLFAQAWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELI FFQGPDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVYVLIDARHGLKEVDQEILKTLDRSAVSYQLVL TKADQIKPAELASRIAETETALAKHPAAFPQVLATSSRSGTGMPELRAAMVRLLEERGA
Sequences:
>Translated_219_residues MTTSSDIDERLIEKGRKLFAQAWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELI FFQGPDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVYVLIDARHGLKEVDQEILKTLDRSAVSYQLVL TKADQIKPAELASRIAETETALAKHPAAFPQVLATSSRSGTGMPELRAAMVRLLEERGA >Mature_218_residues TTSSDIDERLIEKGRKLFAQAWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIF FQGPDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVYVLIDARHGLKEVDQEILKTLDRSAVSYQLVLT KADQIKPAELASRIAETETALAKHPAAFPQVLATSSRSGTGMPELRAAMVRLLEERGA
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=30.7291666666667, Blast_Score=92, Evalue=3e-19, Organism=Escherichia coli, GI145693205, Length=194, Percent_Identity=38.659793814433, Blast_Score=126, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6320543, Length=142, Percent_Identity=30.9859154929577, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 23721; Mature: 23589
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSDIDERLIEKGRKLFAQAWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINAL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH TGQNALARTSHTPGRTQELIFFQGPDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLL HCCCHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GRASLARVYVLIDARHGLKEVDQEILKTLDRSAVSYQLVLTKADQIKPAELASRIAETET CHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHH ALAKHPAAFPQVLATSSRSGTGMPELRAAMVRLLEERGA HHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTSSDIDERLIEKGRKLFAQAWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH TGQNALARTSHTPGRTQELIFFQGPDSAPLRLVDMPGYGYAAAAKTKVASWTELIHQFLL HCCCHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GRASLARVYVLIDARHGLKEVDQEILKTLDRSAVSYQLVLTKADQIKPAELASRIAETET CHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHH ALAKHPAAFPQVLATSSRSGTGMPELRAAMVRLLEERGA HHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]