| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ycfT [C]
Identifier: 146337868
GI number: 146337868
Start: 796638
End: 797690
Strand: Reverse
Name: ycfT [C]
Synonym: BRADO0753
Alternate gene names: 146337868
Gene position: 797690-796638 (Counterclockwise)
Preceding gene: 146337873
Following gene: 146337867
Centisome position: 10.7
GC content: 64.2
Gene sequence:
>1053_bases ATGACCGCGAATGGTACGCCGAGGCCGGCCGGAACCGAGGCGCGCATCGACTGGGTGGACTACGCCAAGGGCATCTGCAT CATCATGGTGGTGATGATGCACTCGGTGCTCGGCGTCGAGCTCGCGGCCGGCGAGACCGGATTCATGCATGCCGTGGTCG CTTTCGCAAAACCGTTCCGGATGCCGGACTTCTTCCTGATCTCCGGCCTGTTCCTGCCGCTGGTGATCGACCGCGACTGG CGTACCTATCTCGACCGCAAGGTCTTGCACTTCGCCTATTTCTACGTGCTGTGGGTGACGATCCAGTTCGGCTTCAAGGC GCCCGGCTTCGCCGCAGCGAACGGCTGGCCGCATGCCGGGTATCTGTACCTGGAATCCTTCATCGAGCCGTTCGGCACGC TGTGGTTCATCTATCTGCTGCCGATCCTCTTCGTCGTCATCAAGGTGACACGGACGGTCCCCGTGCCGGTGATCTGGGGC ATCGCCGCCGGCCTGGAAATGTCGCATATCTCGACCGGCTGGACCGTGATCGACGAATTCTGCGCCCGCTTCGTCTACAT CTATTCCGGCTATCTGTTCGCGACGATCATCTTCGCCATGTCGTATCGCGCCCGGGCACAGCCGATGCTCGCCGTCACCG GCCTGCTCGCCTGGGCGGTGACCAACCAGTCGCTGGTGAGCCTCGGCGTCAGCGAGTGGCCCATCGTCTCGCTGCTGCTC GGCTATGCCGGCGCCGTGGCGATCATCATCGCCGGCACCCTGCTGGCGCGGGCCCAGCTTCTCAACGCGCTCAGGTTCTG CGGCGAGCATTCGATCGTGATCTATCTCGCCTTCTTCCTGCCGATGGCCGCGACGCGCACATTGCTGCTGAAGACGGGGA TCATTACCGATATCGGAACGGTCTCGCTGCTGGTGACCATCGCCGGCGTGCTCGGCGCGCTCGCGATCTGGCGCCTCGCG CTTGTTGTCGGCGCCCGCTTCCTGTTCGAACGCCCCGTCGCGTTCTGGATTGCGCCGCCGAAGGCACGGCCTGCGATGCA GCCGGCAGAGTAG
Upstream 100 bases:
>100_bases CCAGGGGGAATTTAGAAAACGGCATGACGTTTGGATGACAGCAAGGAGTATTAACGGCTCTGCCCGAGAATGCGGCAGCT CCGCGCCAGAGAGGGACAGC
Downstream 100 bases:
>100_bases CGCCACCCACGGTGTCGTCCCGGGCGTAGACCCGGGACCCATAGCCACCGTCCTCAGCGTTGGGCACGCTGTGGCCCCGG CCTGCCGCCTCATTCCCGCC
Product: putative acyltransferase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTANGTPRPAGTEARIDWVDYAKGICIIMVVMMHSVLGVELAAGETGFMHAVVAFAKPFRMPDFFLISGLFLPLVIDRDW RTYLDRKVLHFAYFYVLWVTIQFGFKAPGFAAANGWPHAGYLYLESFIEPFGTLWFIYLLPILFVVIKVTRTVPVPVIWG IAAGLEMSHISTGWTVIDEFCARFVYIYSGYLFATIIFAMSYRARAQPMLAVTGLLAWAVTNQSLVSLGVSEWPIVSLLL GYAGAVAIIIAGTLLARAQLLNALRFCGEHSIVIYLAFFLPMAATRTLLLKTGIITDIGTVSLLVTIAGVLGALAIWRLA LVVGARFLFERPVAFWIAPPKARPAMQPAE
Sequences:
>Translated_350_residues MTANGTPRPAGTEARIDWVDYAKGICIIMVVMMHSVLGVELAAGETGFMHAVVAFAKPFRMPDFFLISGLFLPLVIDRDW RTYLDRKVLHFAYFYVLWVTIQFGFKAPGFAAANGWPHAGYLYLESFIEPFGTLWFIYLLPILFVVIKVTRTVPVPVIWG IAAGLEMSHISTGWTVIDEFCARFVYIYSGYLFATIIFAMSYRARAQPMLAVTGLLAWAVTNQSLVSLGVSEWPIVSLLL GYAGAVAIIIAGTLLARAQLLNALRFCGEHSIVIYLAFFLPMAATRTLLLKTGIITDIGTVSLLVTIAGVLGALAIWRLA LVVGARFLFERPVAFWIAPPKARPAMQPAE >Mature_349_residues TANGTPRPAGTEARIDWVDYAKGICIIMVVMMHSVLGVELAAGETGFMHAVVAFAKPFRMPDFFLISGLFLPLVIDRDWR TYLDRKVLHFAYFYVLWVTIQFGFKAPGFAAANGWPHAGYLYLESFIEPFGTLWFIYLLPILFVVIKVTRTVPVPVIWGI AAGLEMSHISTGWTVIDEFCARFVYIYSGYLFATIIFAMSYRARAQPMLAVTGLLAWAVTNQSLVSLGVSEWPIVSLLLG YAGAVAIIIAGTLLARAQLLNALRFCGEHSIVIYLAFFLPMAATRTLLLKTGIITDIGTVSLLVTIAGVLGALAIWRLAL VVGARFLFERPVAFWIAPPKARPAMQPAE
Specific function: Unknown
COG id: COG4763
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787359, Length=164, Percent_Identity=28.6585365853659, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38592; Mature: 38461
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANGTPRPAGTEARIDWVDYAKGICIIMVVMMHSVLGVELAAGETGFMHAVVAFAKPFR CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCC MPDFFLISGLFLPLVIDRDWRTYLDRKVLHFAYFYVLWVTIQFGFKAPGFAAANGWPHAG CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH YLYLESFIEPFGTLWFIYLLPILFVVIKVTRTVPVPVIWGIAAGLEMSHISTGWTVIDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHH CARFVYIYSGYLFATIIFAMSYRARAQPMLAVTGLLAWAVTNQSLVSLGVSEWPIVSLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH GYAGAVAIIIAGTLLARAQLLNALRFCGEHSIVIYLAFFLPMAATRTLLLKTGIITDIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSLLVTIAGVLGALAIWRLALVVGARFLFERPVAFWIAPPKARPAMQPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure TANGTPRPAGTEARIDWVDYAKGICIIMVVMMHSVLGVELAAGETGFMHAVVAFAKPFR CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCC MPDFFLISGLFLPLVIDRDWRTYLDRKVLHFAYFYVLWVTIQFGFKAPGFAAANGWPHAG CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH YLYLESFIEPFGTLWFIYLLPILFVVIKVTRTVPVPVIWGIAAGLEMSHISTGWTVIDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHH CARFVYIYSGYLFATIIFAMSYRARAQPMLAVTGLLAWAVTNQSLVSLGVSEWPIVSLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH GYAGAVAIIIAGTLLARAQLLNALRFCGEHSIVIYLAFFLPMAATRTLLLKTGIITDIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSLLVTIAGVLGALAIWRLALVVGARFLFERPVAFWIAPPKARPAMQPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA