Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337835
Identifier: 146337835
GI number: 146337835
Start: 753858
End: 754640
Strand: Direct
Name: 146337835
Synonym: BRADO0716
Alternate gene names: NA
Gene position: 753858-754640 (Clockwise)
Preceding gene: 146337831
Following gene: 146337836
Centisome position: 10.11
GC content: 65.64
Gene sequence:
>783_bases ATGTTCGCACGTCTCCTCATCATGATCTATGCCATTGCCAGCTACGCACTTTTTCTTGTGTCGTTTGCCTGGGCGCTCGG TTTCATCGGCAATTATGGCCAGCTTGCCGCCAAAACGATCGACAGCGGCGGCGCCGCCGGGCCGCTCGCCGAGTCCATCG TCGTCGACGTGCTGCTGCTCGCATTGTTCGCGCTTCAGCACAGCGTGATGGCGCGGCCGGCGTTCAAGCGCTGGTGGACG ACCCTCATCCCCGCCGCAACCGAGCGCAGCACCTATGTGCTGCTGTCGAGCCTGGTCCTGTTGCTCCTGCTGTGGCAGTG GCGGCCGATTGCGACGCCGATCTGGCGCGTCGATGGTCTGGCAGGCCAGGTCCTCACCGGCATCCAATGGCTCGGCTGGC TGGTCGCGCTGAGCTCGACCTACATGATCGATCATTTCGGTCTGTTCGGGTTGCGCCAGGGCTTCTTCGCGCTGCGTGGC ACGCCGGTGCCGGGGCAGACGTTCAGGACGCCGCTGCTGTACCGCCTGGTCCGGCATCCGCTGATGCTCGGCTTCCTGCT CGCCTTCTGGGCCACGCCGGAGATGAGCGTTGGCCATCTCCTGTTCGCGGCGCTCAGCACCGGCTACATCCTGATCGGCT CGCGCCTCGAGGAACGCGATCTCGTCGCCGAGTTCGGCGAGATCTATGAGCACTATCGCCAGCAGGTTCCCATGCTGCTG CCGCGCCTCGTCGGTGGGCGGCGAAGCGCGGACGCCGGGGCCGAAGCGGAGCGGATCCGCTGA
Upstream 100 bases:
>100_bases GGACGGTCGCCTGATAGCACTGAGGCTCGATCGCGGCACGCGCTCGGGATCGCTCCCGCCGCACTCATGGCGCGGCCAGC CGCGCAACCGGAGAGCTTCC
Downstream 100 bases:
>100_bases CCGCATCTAAGCTGTCGAGGCGCGGGCAGGCTCCGGGCCCATCTCCGCCGGGGTCTGCCCGCCCTTGTCCCCACGCAGAT GTGAACGGGCGAAACGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Integral Membrane Protein; Conserved Membrane Protein; S-Isoprenylcysteine O-Methyltransferase; Protein-S-Isoprenylcysteine Methyltransferase
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MFARLLIMIYAIASYALFLVSFAWALGFIGNYGQLAAKTIDSGGAAGPLAESIVVDVLLLALFALQHSVMARPAFKRWWT TLIPAATERSTYVLLSSLVLLLLLWQWRPIATPIWRVDGLAGQVLTGIQWLGWLVALSSTYMIDHFGLFGLRQGFFALRG TPVPGQTFRTPLLYRLVRHPLMLGFLLAFWATPEMSVGHLLFAALSTGYILIGSRLEERDLVAEFGEIYEHYRQQVPMLL PRLVGGRRSADAGAEAERIR
Sequences:
>Translated_260_residues MFARLLIMIYAIASYALFLVSFAWALGFIGNYGQLAAKTIDSGGAAGPLAESIVVDVLLLALFALQHSVMARPAFKRWWT TLIPAATERSTYVLLSSLVLLLLLWQWRPIATPIWRVDGLAGQVLTGIQWLGWLVALSSTYMIDHFGLFGLRQGFFALRG TPVPGQTFRTPLLYRLVRHPLMLGFLLAFWATPEMSVGHLLFAALSTGYILIGSRLEERDLVAEFGEIYEHYRQQVPMLL PRLVGGRRSADAGAEAERIR >Mature_260_residues MFARLLIMIYAIASYALFLVSFAWALGFIGNYGQLAAKTIDSGGAAGPLAESIVVDVLLLALFALQHSVMARPAFKRWWT TLIPAATERSTYVLLSSLVLLLLLWQWRPIATPIWRVDGLAGQVLTGIQWLGWLVALSSTYMIDHFGLFGLRQGFFALRG TPVPGQTFRTPLLYRLVRHPLMLGFLLAFWATPEMSVGHLLFAALSTGYILIGSRLEERDLVAEFGEIYEHYRQQVPMLL PRLVGGRRSADAGAEAERIR
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI21358557, Length=227, Percent_Identity=26.8722466960352, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28967; Mature: 28967
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARLLIMIYAIASYALFLVSFAWALGFIGNYGQLAAKTIDSGGAAGPLAESIVVDVLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ALFALQHSVMARPAFKRWWTTLIPAATERSTYVLLSSLVLLLLLWQWRPIATPIWRVDGL HHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH AGQVLTGIQWLGWLVALSSTYMIDHFGLFGLRQGFFALRGTPVPGQTFRTPLLYRLVRHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LMLGFLLAFWATPEMSVGHLLFAALSTGYILIGSRLEERDLVAEFGEIYEHYRQQVPMLL HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH PRLVGGRRSADAGAEAERIR HHHHCCCCCCCCCCHHHCCC >Mature Secondary Structure MFARLLIMIYAIASYALFLVSFAWALGFIGNYGQLAAKTIDSGGAAGPLAESIVVDVLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ALFALQHSVMARPAFKRWWTTLIPAATERSTYVLLSSLVLLLLLWQWRPIATPIWRVDGL HHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH AGQVLTGIQWLGWLVALSSTYMIDHFGLFGLRQGFFALRGTPVPGQTFRTPLLYRLVRHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LMLGFLLAFWATPEMSVGHLLFAALSTGYILIGSRLEERDLVAEFGEIYEHYRQQVPMLL HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH PRLVGGRRSADAGAEAERIR HHHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA