Click here to switch to the map view.

The map label for this gene is ydeK [H]

Identifier: 146337829

GI number: 146337829

Start: 748208

End: 749068

Strand: Direct

Name: ydeK [H]

Synonym: BRADO0710

Alternate gene names: 146337829

Gene position: 748208-749068 (Clockwise)

Preceding gene: 146337827

Following gene: 146337831

Centisome position: 10.03

GC content: 71.08

Gene sequence:

>861_bases
ATGAAGGCATCGATCGACGGCTGGGGCAGCGGCGCCATCGGCATGACGATCTTCAGCGGCTCGCTGCCGGCGACGCGGGC
CGCGCTCGAGGGCTTCGCGCCGCTGTTCCTGACCGGCGCGCGTGCGACGCTGGCCGCGGGGATTGCCGCGCTCTGTCTCG
CCTGGTTCCGCCAGCGCATCCCGGGACGGCGCGAACTGTTGTCGCTCGCGACCGTCGCGCTCGGCGTCGTCATCGGCTTT
CCGCTGCTCACGGCCCTGGCGCTGCAGCACGTGACCTCGGCGCATGCAATCGTCTTCATCGGCCTGCTGCCGCTCTCGAC
GGCGTCGTTCGGCGTGCCGCGCGGCGGCGAGCGGCCGCGGCCGCTGTTCTGGCTGTTCGCATGTCTTGGCGCGGCTTCGG
TCTCCGGCTTCGCGCTGTCCCAGGGCGGCGCCGCGTCGCTCACCGGAGACCTCGCGATGATCGCCGCGATCATCGTCTGC
GGACTCGGCTATGCCGAAGGCGCCGTGCTGACGCGCAGGCTCGGCGGCTGGCAGGTGATCTCATGGGCGCTGCTGCTGTC
GGCGCCCATCATGCTGCCGCTGGCGCTAATGACATGGCCGATCTCCGCGCAGCCGATCAGCGCCGCGGCCTGGCTTGGTC
TCGCCTATGTCTCCGTCTTCAGCATGTTCATCGGGTTCGCCTTCTGGTACCGCGGCCTGTCGCGCGGCGGCACGGCGAGC
GTCGGACAGCTGCAGCTGCTGCAGCCGTTTCTCGGCCTCGCCTTCGCAAGCCTGCTGCTGCACGAGCCGGTGTCCGCCCC
GATGCTCGGCGCGGCCGGACTCGTCGTGCTCTGCGTGGCGATGGCGCGCCGGTGGGCGTAA

Upstream 100 bases:

>100_bases
CTGCCCCACAGATCAATACAGTTTGGCAGAATTGTATCGATCCGTGGCTGCCGCAGCAAGGCGCCTTCGGCTAAGCAGGG
CTGTCCAAGGAGGGCTGAGC

Downstream 100 bases:

>100_bases
GCCGCGCCGGCTATTTGCGACGATAGAGGCCGGTGAAGCTGACGCCCGCACCGCCGCATCCGGCGTTGTCCTCGACCAGC
AGAAGCGCGCCGACCCGCTG

Product: putative inner membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKASIDGWGSGAIGMTIFSGSLPATRAALEGFAPLFLTGARATLAAGIAALCLAWFRQRIPGRRELLSLATVALGVVIGF
PLLTALALQHVTSAHAIVFIGLLPLSTASFGVPRGGERPRPLFWLFACLGAASVSGFALSQGGAASLTGDLAMIAAIIVC
GLGYAEGAVLTRRLGGWQVISWALLLSAPIMLPLALMTWPISAQPISAAAWLGLAYVSVFSMFIGFAFWYRGLSRGGTAS
VGQLQLLQPFLGLAFASLLLHEPVSAPMLGAAGLVVLCVAMARRWA

Sequences:

>Translated_286_residues
MKASIDGWGSGAIGMTIFSGSLPATRAALEGFAPLFLTGARATLAAGIAALCLAWFRQRIPGRRELLSLATVALGVVIGF
PLLTALALQHVTSAHAIVFIGLLPLSTASFGVPRGGERPRPLFWLFACLGAASVSGFALSQGGAASLTGDLAMIAAIIVC
GLGYAEGAVLTRRLGGWQVISWALLLSAPIMLPLALMTWPISAQPISAAAWLGLAYVSVFSMFIGFAFWYRGLSRGGTAS
VGQLQLLQPFLGLAFASLLLHEPVSAPMLGAAGLVVLCVAMARRWA
>Mature_286_residues
MKASIDGWGSGAIGMTIFSGSLPATRAALEGFAPLFLTGARATLAAGIAALCLAWFRQRIPGRRELLSLATVALGVVIGF
PLLTALALQHVTSAHAIVFIGLLPLSTASFGVPRGGERPRPLFWLFACLGAASVSGFALSQGGAASLTGDLAMIAAIIVC
GLGYAEGAVLTRRLGGWQVISWALLLSAPIMLPLALMTWPISAQPISAAAWLGLAYVSVFSMFIGFAFWYRGLSRGGTAS
VGQLQLLQPFLGLAFASLLLHEPVSAPMLGAAGLVVLCVAMARRWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 29607; Mature: 29607

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASIDGWGSGAIGMTIFSGSLPATRAALEGFAPLFLTGARATLAAGIAALCLAWFRQRI
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHC
PGRRELLSLATVALGVVIGFPLLTALALQHVTSAHAIVFIGLLPLSTASFGVPRGGERPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PLFWLFACLGAASVSGFALSQGGAASLTGDLAMIAAIIVCGLGYAEGAVLTRRLGGWQVI
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
SWALLLSAPIMLPLALMTWPISAQPISAAAWLGLAYVSVFSMFIGFAFWYRGLSRGGTAS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQLQLLQPFLGLAFASLLLHEPVSAPMLGAAGLVVLCVAMARRWA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKASIDGWGSGAIGMTIFSGSLPATRAALEGFAPLFLTGARATLAAGIAALCLAWFRQRI
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHC
PGRRELLSLATVALGVVIGFPLLTALALQHVTSAHAIVFIGLLPLSTASFGVPRGGERPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PLFWLFACLGAASVSGFALSQGGAASLTGDLAMIAAIIVCGLGYAEGAVLTRRLGGWQVI
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
SWALLLSAPIMLPLALMTWPISAQPISAAAWLGLAYVSVFSMFIGFAFWYRGLSRGGTAS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQLQLLQPFLGLAFASLLLHEPVSAPMLGAAGLVVLCVAMARRWA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]