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The map label for this gene is yraR [H]

Identifier: 146337794

GI number: 146337794

Start: 705878

End: 706522

Strand: Direct

Name: yraR [H]

Synonym: BRADO0673

Alternate gene names: 146337794

Gene position: 705878-706522 (Clockwise)

Preceding gene: 146337793

Following gene: 146337795

Centisome position: 9.47

GC content: 69.46

Gene sequence:

>645_bases
ATGGCAGGCCGCATCGCGATCATTGCAGGATCAACCGGCCTCGTTGGCCGGGAGCTGCTGCGCGGCCTGCTCGCCGACCC
CGGGGTTGATCACGTCCACAGCGTCGGCCGCCGCGCCCCGCCGCAGGTCTCGCCGAAGCTGACGAGTCACGTTGTCGACT
TCACCGCGCTGCCGTCGCTGCCGGCGGCGGACGAGCTGTATCTCGCACTGGGGACGACCATCAAGGTCGCCGGAAGCCAG
GCGGCCTTTCGCGCGATCGACCATGACGCGAACCTCGCCGTGGCCAAGGCGGCGCTGGCGAGCGGCGCGACGCGGGTGGG
CCTGGTCAGCGCCATGGGCGCTGATGCGAGGTCGCGCATCTTCTACAGCCGCGTGAAAGGTGAGCTCGAGGACGCACTGT
CCGCACTTCCGTTCGCAGGTCTGGTGATTGCCCGTCCTTCGCTGCTGGCTGGAGCCCGCGCCGAGCTCGGGCAGCCGAGC
CGGCCGGGCGAGGAATGGGGCAGCGCCGTAAGCAGGATGATCGGGTTCCTGATTCCGCCAAACTACAAGCCGATCGCTGC
GGCGGATGTTGCGTCTGCGCTGTTGTCCGCCGTGCCCTCCGCGACGGGCAGGGCCATTCTCCTGTCGGGTGCCATGCGCC
GGTGA

Upstream 100 bases:

>100_bases
ACGCGCGAGGAGAAGCCGTCGGGCGGCGGCGCGTTCGCGGCGGCGCTGGCGAAGGCCCAGGAGCGGCGCAAGGGCGCCTG
AGGCGCCCATAGGAGGAGGC

Downstream 100 bases:

>100_bases
TCCCCGCTCACCTCTTGCGGAGACTGGCGACCGCGCCATTTATGAATAATCGAAGTTGCGTGACCTGTGCGTTGCAGCGT
GCATTCGCGCGTGCACAAGC

Product: putative nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MAGRIAIIAGSTGLVGRELLRGLLADPGVDHVHSVGRRAPPQVSPKLTSHVVDFTALPSLPAADELYLALGTTIKVAGSQ
AAFRAIDHDANLAVAKAALASGATRVGLVSAMGADARSRIFYSRVKGELEDALSALPFAGLVIARPSLLAGARAELGQPS
RPGEEWGSAVSRMIGFLIPPNYKPIAAADVASALLSAVPSATGRAILLSGAMRR

Sequences:

>Translated_214_residues
MAGRIAIIAGSTGLVGRELLRGLLADPGVDHVHSVGRRAPPQVSPKLTSHVVDFTALPSLPAADELYLALGTTIKVAGSQ
AAFRAIDHDANLAVAKAALASGATRVGLVSAMGADARSRIFYSRVKGELEDALSALPFAGLVIARPSLLAGARAELGQPS
RPGEEWGSAVSRMIGFLIPPNYKPIAAADVASALLSAVPSATGRAILLSGAMRR
>Mature_213_residues
AGRIAIIAGSTGLVGRELLRGLLADPGVDHVHSVGRRAPPQVSPKLTSHVVDFTALPSLPAADELYLALGTTIKVAGSQA
AFRAIDHDANLAVAKAALASGATRVGLVSAMGADARSRIFYSRVKGELEDALSALPFAGLVIARPSLLAGARAELGQPSR
PGEEWGSAVSRMIGFLIPPNYKPIAAADVASALLSAVPSATGRAILLSGAMRR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=173, Percent_Identity=34.1040462427746, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728168, Length=173, Percent_Identity=34.1040462427746, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728164, Length=173, Percent_Identity=34.1040462427746, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728166, Length=173, Percent_Identity=34.1040462427746, Blast_Score=80, Evalue=9e-16,
Organism=Escherichia coli, GI87082218, Length=221, Percent_Identity=37.5565610859729, Blast_Score=104, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71983631, Length=207, Percent_Identity=33.8164251207729, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320840, Length=158, Percent_Identity=34.8101265822785, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 21888; Mature: 21756

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRIAIIAGSTGLVGRELLRGLLADPGVDHVHSVGRRAPPQVSPKLTSHVVDFTALPSL
CCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PAADELYLALGTTIKVAGSQAAFRAIDHDANLAVAKAALASGATRVGLVSAMGADARSRI
CCCCCEEEECCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
FYSRVKGELEDALSALPFAGLVIARPSLLAGARAELGQPSRPGEEWGSAVSRMIGFLIPP
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCC
NYKPIAAADVASALLSAVPSATGRAILLSGAMRR
CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
AGRIAIIAGSTGLVGRELLRGLLADPGVDHVHSVGRRAPPQVSPKLTSHVVDFTALPSL
CCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PAADELYLALGTTIKVAGSQAAFRAIDHDANLAVAKAALASGATRVGLVSAMGADARSRI
CCCCCEEEECCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
FYSRVKGELEDALSALPFAGLVIARPSLLAGARAELGQPSRPGEEWGSAVSRMIGFLIPP
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCC
NYKPIAAADVASALLSAVPSATGRAILLSGAMRR
CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]